Pre_GI: BLASTP Hits

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Query: NC_017259:388000:391649 Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,

Start: 391649, End: 392035, Length: 387

Host Lineage: Buchnera aphidicola; Buchnera; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: It is believed that the Buchnera provide the essential nutrients the host lacks. Besides a nutritional co-dependence, due to a co-existence of millions of years, Buchnera have lost the ability to produce cell surface components such as lipopolysaccharides. This makes for an obligate endosymbiont relationship between host and Buchnera. Buchnera are prokaryotic cells which belong to the gamma-Proteobacteria, closely related to the Enterobacteriaceae family. Phylogenetic studies using 16S rRNA indicate that the symbiotic relationship was established around 200-250 million years ago. Since Buchnera are closely related to Escherichia coli and Haemophilus influenzae, comparative genomic studies can shed light on the evolutionary mechanisms of intracellular endosymbiosis as well as the different underlying molecular basis between organisms with parasitic behavior and symbionts.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002528:404545:408889408889409275387Buchnera aphidicola str. APS (Acyrthosiphon pisum), completehypothetical protein3e-32136
NC_010658:4494103:450877145087714509157387Shigella boydii CDC 3083-94, complete genomeputative endoribonuclease L-PSP1e-1891.7
NC_010498:4821519:482574748257474826172426Escherichia coli SMS-3-5, complete genomeputative endoribonuclease L-PSP2e-1891.3
NC_007613:4217557:425144742514474251872426Shigella boydii Sb227, complete genomehypothetical protein2e-1891.3
AC_000091:4472000:447520744752074475593387Escherichia coli W3110 DNA, complete genomeketoacid-binding protein1e-1891.3
NC_010473:4564590:457035845703584570744387Escherichia coli str. K-12 substr. DH10B, complete genomeketoacid-binding protein1e-1891.3
NC_000913:4462782:446855044685504468936387Escherichia coli K12, complete genomeketoacid-binding protein1e-1891.3
NC_011742:4795733:479996147999614800347387Escherichia coli S88 chromosome, complete genomeketoacid-binding protein1e-1891.3
NC_012947:3947238:395991839599183960304387Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeendoribonuclease L-PSP1e-1891.3
NC_012967:4449576:445380444538044454190387Escherichia coli B str. REL606 chromosome, complete genomeketoacid-binding protein1e-1891.3
NC_020063:4170464:418221241822124182598387Enterobacteriaceae bacterium strain FGI 57, complete genomeendoribonuclease L-PSP, putative3e-1890.1
NC_010658:3014371:302702430270243027413390Shigella boydii CDC 3083-94, complete genomeputative endoribonuclease L-PSP3e-1787.4
NC_008258:3224721:322615732261573226609453Shigella flexneri 5 str. 8401, complete genomehypothetical protein3e-1787.4
NC_009800:3307123:330855933085593308948390Escherichia coli HS, complete genomeputative endoribonuclease L-PSP3e-1787.4
AC_000091:3258377:325837732583773258766390Escherichia coli W3110 DNA, complete genomepredicted L-PSP (mRNA) endoribonuclease3e-1787.4
NC_007613:2981829:298182929818292982281453Shigella boydii Sb227, complete genomehypothetical protein3e-1787.4
NC_011748:3608917:361329736132973613686390Escherichia coli 55989, complete genomehypothetical protein3e-1787.4
NC_011750:3768692:377307237730723773461390Escherichia coli IAI39 chromosome, complete genomehypothetical protein3e-1787.4
CU928160:3344746:334618233461823346571390Escherichia coli IAI1 chromosome, complete genomeL-PSP (mRNA) endoribonuclease3e-1787.4
NC_004337:3249791:325122732512273251616390Shigella flexneri 2a str. 301, complete genomehypothetical protein3e-1787.4
CP002516:613462:628259628259628648390Escherichia coli KO11, complete genomeendoribonuclease L-PSP3e-1787.4
CP002185:3475991:347742534774253477814390Escherichia coli W, complete genomepredicted L-PSP (mRNA) endoribonuclease3e-1787.4
CU928145:3608917:361329736132973613686390Escherichia coli 55989 chromosome, complete genomeL-PSP (mRNA) endoribonuclease3e-1787.4
NC_000913:3256307:325774332577433258132390Escherichia coli K12, complete genomepredicted L-PSP (mRNA) endoribonuclease3e-1787.4
NC_010468:613812:630450630450630839390Escherichia coli ATCC 8739, complete genomeendoribonuclease L-PSP3e-1787.4
NC_011751:3710786:371516737151673715556390Escherichia coli UMN026 chromosome, complete genomehypothetical protein3e-1787.4
NC_017328:3289853:329128932912893291741453Shigella flexneri 2002017 chromosome, complete genomehypothetical protein3e-1787.4
NC_016902:613462:628259628259628648390Escherichia coli KO11FL chromosome, complete genomeendoribonuclease L-PSP3e-1787.4
NC_012967:3191319:319275531927553193144390Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein3e-1787.4
NC_012947:630757:647395647395647784390Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein3e-1787.4
NC_012759:3143455:314489131448913145280390Escherichia coli BW2952 chromosome, complete genomehypothetical protein3e-1787.4
NC_011741:3344746:334618233461823346571390Escherichia coli IAI1 chromosome, complete genomehypothetical protein3e-1787.4
NC_011415:3523364:352774435277443528133390Escherichia coli SE11 chromosome, complete genomehypothetical protein3e-1787.4
NC_004741:3240909:324234532423453242734390Shigella flexneri 2a str. 2457T, complete genomehypothetical protein3e-1787.4
NC_002695:3994970:399935039993503999739390Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein3e-1787.4
NC_010498:3488513:348994934899493490338390Escherichia coli SMS-3-5, complete genomeputative endoribonuclease L-PSP3e-1787.4
NC_010473:3354052:335548833554883355877390Escherichia coli str. K-12 substr. DH10B, complete genomepredicted L-PSP (mRNA) endoribonuclease3e-1787.4
NC_013941:3884725:388910538891053889557453Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeTdcF protein3e-1787
NC_014618:586240:610365610365610754390Enterobacter cloacae SCF1 chromosome, complete genomeendoribonuclease L-PSP2e-1684.3
NC_011297:1167615:117385711738571174234378Dictyoglomus thermophilum H-6-12, complete genomeendoribonuclease L-PSP5e-1579.7
NC_014758:579741:586370586370586747378Calditerrivibrio nitroreducens DSM 19672 chromosome, completeendoribonuclease l-psp3e-1477.4
NC_021066:3703725:371400037140003714386387Raoultella ornithinolytica B6, complete genomeendoribonuclease L-PSP4e-1476.6
NC_014632:11925:310333103331416384Ilyobacter polytropus DSM 2926 chromosome, complete genomeendoribonuclease L-PSP1e-1375.5
NC_014364:2904443:290909329090932909467375Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeendoribonuclease L-PSP2e-1374.3
NC_020272:3396800:342115334211533421530378Bacillus amyloliquefaciens IT-45, complete genomehypothetical protein2e-1374.3
NC_009614:3714770:372855137285513728928378Bacteroides vulgatus ATCC 8482 chromosome, complete genomeendoribonuclease L-PSP5e-1373.2
NC_012121:139741:149032149032149412381Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative purine regulatory protein6e-1372.8
NC_011661:1332309:135425513542551354632378Dictyoglomus turgidum DSM 6724, complete genomeendoribonuclease L-PSP1e-1272
NC_007577:503440:520657520657521049393Prochlorococcus marinus str. MIT 9312, complete genomeYjgF-like protein4e-1270.1
NC_014632:113420:126595126595126978384Ilyobacter polytropus DSM 2926 chromosome, complete genomeendoribonuclease L-PSP4e-1270.1
NC_015144:1526669:153075515307551531147393Weeksella virosa DSM 16922 chromosome, complete genomeendoribonuclease L-PSP5e-1269.7
NC_009091:493302:510528510528510920393Prochlorococcus marinus str. MIT 9301, complete genomePutative translation initiation inhibitor, yjgF family6e-1269.3
NC_019978:1022209:102664010266401027026387Halobacteroides halobius DSM 5150, complete genomeendoribonuclease L-PSP, putative8e-1269.3
NC_011126:129937:135039135039135419381Hydrogenobaculum sp. Y04AAS1, complete genomeendoribonuclease L-PSP8e-1268.9
NC_005072:508827:526041526041526433393Prochlorococcus marinus subsp. pastoris str. CCMP1986, completehypothetical protein8e-1268.9
NC_016791:1980844:200449120044912004871381Clostridium sp. BNL1100 chromosome, complete genomeendoribonuclease L-PSP1e-1168.6
NC_008816:518895:536095536095536487393Prochlorococcus marinus str. AS9601, complete genomePutative translation initiation inhibitor, yjgF family1e-1168.6
NC_020411:114683:138539138539138919381Hydrogenobaculum sp. HO, complete genomeendoribonuclease L-PSP2e-1168.2
NC_015587:114684:138540138540138920381Hydrogenobaculum sp. SHO chromosome, complete genomeendoribonuclease L-PSP2e-1168.2
NC_015557:114648:138504138504138884381Hydrogenobaculum sp. 3684 chromosome, complete genomeendoribonuclease L-PSP2e-1168.2
NC_009840:544816:562030562030562422393Prochlorococcus marinus str. MIT 9215, complete genomePutative translation initiation inhibitor, yjgF family2e-1167.8
NC_008817:539349:556560556560556952393Prochlorococcus marinus str. MIT 9515, complete genomePutative translation initiation inhibitor, yjgF family3e-1167
NC_008701:391216:401455401455401829375Pyrobaculum islandicum DSM 4184, complete genomeputative endoribonuclease L-PSP5e-1166.6
NC_010674:615963:630362630362630736375Clostridium botulinum B str. Eklund 17B, complete genomeputative endoribonuclease L-PSP6e-1166.2
NC_003143:1880000:190011019001101900487378Yersinia pestis CO92, complete genomeYjgF-family lipoprotein8e-1165.9
NC_014029:2607666:260766626076662608043378Yersinia pestis Z176003 chromosome, complete genomeYjgF-family lipoprotein8e-1165.9
NC_017265:1715035:173654617365461736923378Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,YjgF-family lipoprotein8e-1165.9
NC_005810:1976000:199639219963921996799408Yersinia pestis biovar Microtus str. 91001, complete genomeYjgF-family lipoprotein1e-1065.5
NC_016885:809000:814549814549814929381Pyrobaculum oguniense TE7 chromosome, complete genomeendoribonuclease L-PSP2e-1064.7
NC_017361:930280:930280930280930657378Helicobacter pylori SouthAfrica7 chromosome, complete genometranslation initiation inhibitor2e-1064.3
NC_010723:575254:594070594070594447378Clostridium botulinum E3 str. Alaska E43, complete genomeputative endoribonuclease L-PSP2e-1064.3
NC_015589:7678:182061820618589384Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeendoribonuclease L-PSP7e-1062.8
NC_003210:870587:882328882328882705378Listeria monocytogenes EGD-e, complete genomehypothetical protein6e-1062.8
NC_013766:906550:918309918309918686378Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein6e-1062.8
NC_020291:795500:798015798015798389375Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeRutC family protein9e-1062.4
NC_009495:2085000:209178220917822092150369Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeendoribonuclease L-PSP1e-0962
NC_009697:2012500:202042320204232020791369Clostridium botulinum A str. ATCC 19397 chromosome, completeendoribonuclease L-PSP1e-0962
NC_009698:2012500:202064020206402021008369Clostridium botulinum A str. Hall chromosome, complete genomeendoribonuclease L-PSP1e-0962
NC_012563:2230403:223849122384912238859369Clostridium botulinum A2 str. Kyoto, complete genomeputative endoribonuclease L-PSP1e-0962
NC_009699:2142177:215012221501222150490369Clostridium botulinum F str. Langeland chromosome, complete genomeendoribonuclease L-PSP1e-0962
NC_017297:2143000:215022121502212150589369Clostridium botulinum F str. 230613 chromosome, complete genomeendoribonuclease L-PSP1e-0962
NC_008319:1727686:173335017333501733754405Synechococcus sp. CC9311, complete genomeputative endoribonuclease L-PSP2e-0961.2
NC_021182:401129:416427416427416807381Clostridium pasteurianum BC1, complete genomeendoribonuclease L-PSP, putative2e-0961.2
NC_016642:1234500:123607312360731236456384Pseudovibrio sp. FO-BEG1 chromosome, complete genomezinc carboxypeptidase-like protein4e-0960.5
NC_015666:1293500:129843212984321298812381Halopiger xanaduensis SH-6 chromosome, complete genomeendoribonuclease L-PSP3e-0960.5
NC_014221:398636:411607411607411999393Truepera radiovictrix DSM 17093 chromosome, complete genomeendoribonuclease L-PSP3e-0960.5
NC_014328:4387303:438918143891814389555375Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative endoribonuclease L-PSP3e-0960.5
NC_010516:2093901:209988820998882100256369Clostridium botulinum B1 str. Okra, complete genomeputative endoribonuclease L-PSP3e-0960.5
NC_013385:90331:993919939199813423Ammonifex degensii KC4, complete genomeendoribonuclease L-PSP3e-0960.5
NC_012658:2138791:214621421462142146582369Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative endoribonuclease L-PSP5e-0959.7
NC_015873:1411718:141171814117181412104387Megasphaera elsdenii DSM 20460, complete genomeputative endoribonuclease L-PSP6e-0959.7
NC_005042:513931:532072532072532470399Prochlorococcus marinus subsp. marinus str. CCMP1375, completePutative translation initiation inhibitor8e-0959.3
NC_009802:1827138:184306818430681843502435Campylobacter concisus 13826, complete genomeputative endoribonuclease L-PSP7e-0959.3
NC_007576:435713:457772457772458158387Lactobacillus sakei subsp. sakei 23K, complete genomePutative single-stranded mRNA endoribonuclease2e-0857.8
NC_013501:931418:931418931418931816399Rhodothermus marinus DSM 4252, complete genomeendoribonuclease L-PSP4e-0856.6
NC_015500:2417041:243375424337542434122369Treponema brennaborense DSM 12168 chromosome, complete genomeendoribonuclease L-PSP4e-0856.6
NC_015966:2337833:235673623567362357134399Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeendoribonuclease L-PSP4e-0856.6
NC_019974:3013338:302391930239193024308390Natronococcus occultus SP4, complete genomeendoribonuclease L-PSP, putative5e-0856.6
NC_010556:316996:321607321607321996390Exiguobacterium sibiricum 255-15, complete genomeendoribonuclease L-PSP6e-0856.2
NC_016025:807226:829399829399829797399Candidatus Chloracidobacterium thermophilum B chromosome chromosomeendoribonuclease L-PSP6e-0856.2
NC_013744:159861:178667178667179047381Haloterrigena turkmenica DSM 5511 plasmid pHTUR01, completeendoribonuclease L-PSP1e-0755.5
NC_015942:3090275:310540431054043105796393Acidithiobacillus ferrivorans SS3 chromosome, complete genomeendoribonuclease L-PSP4e-0753.5
NC_014532:3967463:398728439872843987673390Halomonas elongata DSM 2581, complete genomeK07567 TdcF protein5e-0753.1
NC_015873:380485:409686409686410054369Megasphaera elsdenii DSM 20460, complete genomeputative endoribonuclease L-PSP1e-0652.4
NC_008698:560529:563553563553563933381Thermofilum pendens Hrk 5, complete genomeputative endoribonuclease L-PSP6e-0649.3
NC_009483:3727490:373022037302203730603384Geobacter uraniireducens Rf4 chromosome, complete genomeputative endoribonuclease L-PSP1e-0548.9