Pre_GI: BLASTP Hits

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Query: NC_017259:25400:47913 Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,

Start: 47913, End: 47994, Length: 82

Host Lineage: Buchnera aphidicola; Buchnera; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: It is believed that the Buchnera provide the essential nutrients the host lacks. Besides a nutritional co-dependence, due to a co-existence of millions of years, Buchnera have lost the ability to produce cell surface components such as lipopolysaccharides. This makes for an obligate endosymbiont relationship between host and Buchnera. Buchnera are prokaryotic cells which belong to the gamma-Proteobacteria, closely related to the Enterobacteriaceae family. Phylogenetic studies using 16S rRNA indicate that the symbiotic relationship was established around 200-250 million years ago. Since Buchnera are closely related to Escherichia coli and Haemophilus influenzae, comparative genomic studies can shed light on the evolutionary mechanisms of intracellular endosymbiosis as well as the different underlying molecular basis between organisms with parasitic behavior and symbionts.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008513:13484:31981319813206282Buchnera aphidicola str. Cc (Cinara cedri), complete genometRNA-Tyr4e-0857
NC_017253:31192:48669486694875385Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) chromosome,tRNA-Tyr5e-0856.6
NC_006155:2461262:24695342469534246961885Yersinia pseudotuberculosis IP 32953, complete genometRNA-Tyr2e-0754.3
NC_020260:1535394:15365041536504153658885Cronobacter sakazakii Sp291, complete genometRNA-Tyr2e-0754.3
NC_010634:2376245:23858362385836238592085Yersinia pseudotuberculosis PB1/+, complete genometRNA-Tyr2e-0754.3
NC_006155:2461262:24693842469384246946885Yersinia pseudotuberculosis IP 32953, complete genometRNA-Tyr2e-0754.3
NC_008149:1842500:18493811849381184946585Yersinia pestis Nepal516, complete genometRNA-Tyr2e-0754.3
NC_015224:2618192:26303562630356263044085Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,tRNA-Tyr2e-0754.3
NC_008150:1705152:17127291712729171281385Yersinia pestis Antiqua, complete genometRNA-Tyr2e-0754.3
NC_015061:2867027:28850292885029288511385Rahnella sp. Y9602 chromosome, complete genometRNA-Tyr2e-0754.3
NC_015968:2583721:26017772601777260186185Enterobacter asburiae LF7a chromosome, complete genometRNA-Tyr2e-0754.3
NC_015968:2583721:26018972601897260198185Enterobacter asburiae LF7a chromosome, complete genometRNA-Tyr2e-0754.3
NC_005810:2180303:21899082189908218999285Yersinia pestis biovar Microtus str. 91001, complete genometRNA-Tyr2e-0754.3
NC_010634:2376245:23856862385686238577085Yersinia pseudotuberculosis PB1/+, complete genometRNA-Tyr2e-0754.3
NC_017265:2087487:21010532101053210113785Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,tRNA-Tyr2e-0754.3
NC_017255:31211:48688486884877285Buchnera aphidicola str. LL01 (Acyrthosiphon pisum) chromosome,tRNA-Tyr2e-0754.3
NC_017254:31206:48684486844876885Buchnera aphidicola str. JF98 (Acyrthosiphon pisum) chromosome,tRNA-Tyr2e-0754.3
NC_017252:31215:48690486904877485Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum) chromosome,tRNA-Tyr2e-0754.3
NC_017154:2430093:24376702437670243775485Yersinia pestis D106004 chromosome, complete genometRNA-Tyr2e-0754.3
NC_016514:2647984:26663622666362266644685Enterobacter cloacae EcWSU1 chromosome, complete genometRNA-Tyr2e-0754.3
NC_016514:2647984:26662422666242266632685Enterobacter cloacae EcWSU1 chromosome, complete genometRNA-Tyr2e-0754.3
NC_008800:2448583:24605332460533246061785Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,tRNA-Tyr2e-0754.3
NC_015224:2618192:26301462630146263023085Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,tRNA-Tyr2e-0754.3
NC_003143:2433190:24407672440767244085185Yersinia pestis CO92, complete genometRNA-Tyr2e-0754.3
NC_004088:2366000:23793562379356237943782Yersinia pestis KIM, complete genometRNA-Tyr3e-0753.9
NC_010473:4256000:42731914273191427327585Escherichia coli str. K-12 substr. DH10B, complete genometRNA-Tyr8e-0752.4
NC_010468:4455201:44567734456773445685785Escherichia coli ATCC 8739, complete genometRNA-Tyr8e-0752.4
NC_009832:2969376:29907912990791299087585Serratia proteamaculans 568, complete genometRNA-Tyr8e-0752.4
NC_007946:3683371:36895573689557368963882Escherichia coli UTI89, complete genometRNA-Tyr9e-0752.4
NC_006511:4119332:41337594133759413384082Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCtRNA-Tyr9e-0752.4
CU928160:4248621:42646174264617426470185Escherichia coli IAI1 chromosome, complete genometRNA-Tyr8e-0752.4
NC_003198:3586000:35909953590995359107985Salmonella enterica subsp. enterica serovar Typhi str. CT18,tRNA-Tyr8e-0752.4
NC_009832:2969376:29906102990610299069485Serratia proteamaculans 568, complete genometRNA-Tyr8e-0752.4
NC_000913:4159090:41734954173495417357985Escherichia coli K12, complete genometRNA-Tyr8e-0752.4
NC_013421:2453078:24650072465007246509185Pectobacterium wasabiae WPP163, complete genometRNA-Tyr8e-0752.4
NC_011750:4543135:45553174555317455540185Escherichia coli IAI39 chromosome, complete genometRNA-Tyr8e-0752.4
NC_020260:1535394:15362081536208153629285Cronobacter sakazakii Sp291, complete genometRNA-Tyr8e-0752.4
NC_009436:203365:22036422036422044885Enterobacter sp. 638, complete genometRNA-Tyr8e-0752.4
NC_016632:1637500:16563041656304165638582Serratia symbiotica str. 'Cinara cedri' chromosome, completetRNA-Tyr2e-0651.6
NC_015662:15641:33477334773355882Buchnera aphidicola (Cinara tujafilina) chromosome, completetRNA-Tyr2e-0651.2
NC_004061:31500:48774487744885582Buchnera aphidicola str. Sg (Schizaphis graminum), complete genometRNA-Tyr2e-0650.8
NC_014306:2703544:27233642723364272344885Erwinia billingiae Eb661, complete genometRNA-Tyr3e-0650.4
NC_021150:582011:58863958863958872082Azotobacter vinelandii CA6, complete genometRNA-Tyr4e-0650.1
NC_012560:582011:58863958863958872082Azotobacter vinelandii DJ, complete genometRNA-Tyr4e-0650.1
NC_013440:5509790:55240025524002552408685Haliangium ochraceum DSM 14365, complete genometRNA-Tyr4e-0650.1
NC_009922:2590317:26041352604135260421985Alkaliphilus oremlandii OhILAs, complete genometRNA-Tyr6e-0649.3