Pre_GI: BLASTN Hits

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Query: NC_017249:9198000 Bradyrhizobium japonicum USDA 6, complete genome

Start: 9198000, End: 9221999, Length: 24000

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004463:90872909087290911099923710Bradyrhizobium japonicum USDA 110, complete genome018600BLASTN svgBLASTP svg
NC_004463:1992000*1992000204369751698Bradyrhizobium japonicum USDA 110, complete genome01584BLASTN svgBLASTP svg
NC_007964:32882532882536913940315Nitrobacter hamburgensis X14, complete genome01035BLASTN svgBLASTP svg
NC_015684:31579413157941318409926159Oligotropha carboxidovorans OM5 chromosome, complete genome01019BLASTN svgBLASTP svg
NC_011386:93114093114096230731168Oligotropha carboxidovorans OM5, complete genome01019BLASTN svgBLASTP svg
NC_007958:830000*83000086140231403Rhodopseudomonas palustris BisB5, complete genome2e-103385BLASTN svgBLASTP svg
NC_004463:20595002059500207783918340Bradyrhizobium japonicum USDA 110, complete genome1e-88335BLASTN svgBLASTP svg
NC_012808:19790001979000199740518406Methylobacterium extorquens AM1, complete genome6e-69270BLASTN svgBLASTP svg
NC_004463:17725411772541179709924559Bradyrhizobium japonicum USDA 110, complete genome5e-57230BLASTN svgBLASTP svg
NC_011004:11748131174813119811023298Rhodopseudomonas palustris TIE-1, complete genome5e-51210BLASTN svgBLASTP svg
NC_011958:73575573575578945053696Rhodobacter sphaeroides KD131 chromosome 2, complete genome2e-38168BLASTN svgBLASTP svg
NC_013856:16997416997418959919626Azospirillum sp. B510 plasmid pAB510b, complete sequence7e-38167BLASTN svgBLASTP svg
NC_008686:405159*40515944047735319Paracoccus denitrificans PD1222 chromosome 1, complete sequence3e-37165BLASTN svgBLASTP svg
NC_011958:976500976500101879142292Rhodobacter sphaeroides KD131 chromosome 2, complete genome4e-36161BLASTN svgBLASTP svg
NC_011958:53426*534267609922674Rhodobacter sphaeroides KD131 chromosome 2, complete genome4e-36161BLASTN svgBLASTP svg
NC_011958:1121387*1121387114659925213Rhodobacter sphaeroides KD131 chromosome 2, complete genome4e-36161BLASTN svgBLASTP svg
NC_004463:90313319031331904979018460Bradyrhizobium japonicum USDA 110, complete genome1e-33153BLASTN svgBLASTP svg
NC_015976:24060362406036242731421279Sphingobium sp. SYK-6, complete genome1e-33153BLASTN svgBLASTP svg
NC_015976:31188043118804314699128188Sphingobium sp. SYK-6, complete genome1e-33153BLASTN svgBLASTP svg
NC_007794:262402*26240229308630685Novosphingobium aromaticivorans DSM 12444, complete genome2e-25125BLASTN svgBLASTP svg
NC_003911:633393*63339366026126869Silicibacter pomeroyi DSS-3, complete genome4e-24121BLASTN svgBLASTP svg
NC_011420:35825003582500360636823869Rhodospirillum centenum SW, complete genome1e-23119BLASTN svgBLASTP svg
NC_010172:38946523894652393647541824Methylobacterium extorquens PA1, complete genome1e-20109BLASTN svgBLASTP svg
NC_013235:3812838*3812838384142328586Nakamurella multipartita DSM 44233, complete genome8e-19103BLASTN svgBLASTP svg
NC_008687:96515296515299188826737Paracoccus denitrificans PD1222 chromosome 2, complete sequence3e-18101BLASTN svgBLASTP svg
NC_013235:13544431354443137485420412Nakamurella multipartita DSM 44233, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_015857:531314*53131455683525522Brucella pinnipedialis B2/94 chromosome chromosome 1, complete3e-1591.7BLASTN svgBLASTP svg
NC_011894:2747491*2747491277359926109Methylobacterium nodulans ORS 2060, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_010103:507482*50748253233624855Brucella canis ATCC 23365 chromosome I, complete sequence3e-1591.7BLASTN svgBLASTP svg
NC_011894:3988500*3988500401357725078Methylobacterium nodulans ORS 2060, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_015740:14191014191016419522286Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete5e-1487.7BLASTN svgBLASTP svg
NC_015740:26143172614317265004935733Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete5e-1487.7BLASTN svgBLASTP svg
NC_003317:14438741443874146565121778Brucella melitensis 16M chromosome I, complete sequence8e-1383.8BLASTN svgBLASTP svg
NC_004310:508483*50848353488526403Brucella suis 1330 chromosome I, complete sequence8e-1383.8BLASTN svgBLASTP svg
NC_006932:531000*53100055709926100Brucella abortus biovar 1 str. 9-941 chromosome I, complete8e-1383.8BLASTN svgBLASTP svg
NC_007618:52640052640055279626397Brucella melitensis biovar Abortus 2308 chromosome I, complete8e-1383.8BLASTN svgBLASTP svg
NC_010742:529500*52950055481725318Brucella abortus S19 chromosome 1, complete sequence8e-1383.8BLASTN svgBLASTP svg
NC_010801:48160148160150140619806Burkholderia multivorans ATCC 17616 chromosome 3, complete8e-1383.8BLASTN svgBLASTP svg
NC_010805:57570957570964147565767Burkholderia multivorans ATCC 17616 chromosome 2, complete8e-1383.8BLASTN svgBLASTP svg
NC_010086:18163781816378188976873391Burkholderia multivorans ATCC 17616 chromosome 2, complete8e-1383.8BLASTN svgBLASTP svg
NC_010087:376918*37691844748870571Burkholderia multivorans ATCC 17616 chromosome 3, complete8e-1383.8BLASTN svgBLASTP svg
NC_010338:58800058800061124723248Caulobacter sp. K31, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_010125:10517351051735108259930865Gluconacetobacter diazotrophicus PAl 5, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_007951:19289061928906195286323958Burkholderia xenovorans LB400 chromosome 1, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_007951:20873852087385211670629322Burkholderia xenovorans LB400 chromosome 1, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_007951:2206263*2206263222784621584Burkholderia xenovorans LB400 chromosome 1, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_007951:76950076950079672027221Burkholderia xenovorans LB400 chromosome 1, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_007952:32382413238241325679118551Burkholderia xenovorans LB400 chromosome 2, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_010169:527500*52750055287125372Brucella suis ATCC 23445 chromosome I, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_012721:25561602556160260386447705Burkholderia glumae BGR1 chromosome 2, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012724:30703863070386309007619691Burkholderia glumae BGR1 chromosome 1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012724:359444*35944438978130338Burkholderia glumae BGR1 chromosome 1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012811:31730831730834221324906Methylobacterium extorquens AM1 megaplasmid, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_012856:10800001080000110535625357Ralstonia pickettii 12D chromosome 1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015383:22903622903624724318208Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_014910:1591003*1591003161459423592Alicycliphilus denitrificans BC chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014910:15019521501952152412822177Alicycliphilus denitrificans BC chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014910:12006051200605122046619862Alicycliphilus denitrificans BC chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_011894:6888562*6888562695715868597Methylobacterium nodulans ORS 2060, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_008752:32176953217695323954921855Acidovorax avenae subsp. citrulli AAC00-1, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_008752:29369332936933297832941397Acidovorax avenae subsp. citrulli AAC00-1, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014910:19125521912552193924626695Alicycliphilus denitrificans BC chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014910:75519275519280336548174Alicycliphilus denitrificans BC chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014931:55739425573942559409920158Variovorax paradoxus EPS chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014931:4234288*4234288426496730680Variovorax paradoxus EPS chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014931:4210029*4210029424439734369Variovorax paradoxus EPS chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014931:29496972949697297109921403Variovorax paradoxus EPS chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014931:25114232511423253417122749Variovorax paradoxus EPS chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014910:966761*96676199256725807Alicycliphilus denitrificans BC chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_010338:4530403*4530403455419223790Caulobacter sp. K31, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010338:2443765*2443765246613122367Caulobacter sp. K31, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009077:2308634*2308634235649847865Mycobacterium sp. JLS, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004463:21581162158116223609977984Bradyrhizobium japonicum USDA 110, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_002678:37015003701500374659945100Mesorhizobium loti MAFF303099, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011004:1136895*1136895116187724983Rhodopseudomonas palustris TIE-1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_011662:38616238616243991353752Thauera sp. MZ1T, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012590:37697*376977357935883Corynebacterium aurimucosum ATCC 700975, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007164:14343051434305147733743033Corynebacterium jeikeium K411, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008060:3155133*3155133320509949967Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_008061:21068482106848213789431047Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_008543:12767512767515311825444Burkholderia cenocepacia HI2424 chromosome 2, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_009140:121107*12110714459223486Salmonella enterica enterica sv Newport str. SL254, complete3e-0661.9BLASTN svgBLASTP svg
NC_012724:25475002547500258413336634Burkholderia glumae BGR1 chromosome 1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013209:2582878*2582878262254039663Acetobacter pasteurianus IFO 3283-01, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_018691:359695*35969537768217988Alcanivorax dieselolei B5 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002678:48591114859111488349624386Mesorhizobium loti MAFF303099, complete genome3e-0661.9BLASTN svgBLASTP svg