Pre_GI: BLASTN Hits

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Query: NC_017249:908500 Bradyrhizobium japonicum USDA 6, complete genome

Start: 908500, End: 949119, Length: 40620

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004463:20595002059500207783918340Bradyrhizobium japonicum USDA 110, complete genome02230BLASTN svgBLASTP svg
NC_004463:18725371872537189486322327Bradyrhizobium japonicum USDA 110, complete genome02230BLASTN svgBLASTP svg
NC_004463:18986481898648196425565608Bradyrhizobium japonicum USDA 110, complete genome02198BLASTN svgBLASTP svg
NC_011004:40739164073916411759943684Rhodopseudomonas palustris TIE-1, complete genome3e-87331BLASTN svgBLASTP svg
NC_008380:2210649*2210649225616245514Rhizobium leguminosarum bv. viciae 3841, complete genome9e-54220BLASTN svgBLASTP svg
NC_015740:34862263486226350909922874Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete2e-39172BLASTN svgBLASTP svg
NC_009439:4404942*4404942442988324942Pseudomonas mendocina ymp, complete genome7e-39170BLASTN svgBLASTP svg
NC_011386:136223*13622316996433742Oligotropha carboxidovorans OM5, complete genome7e-36161BLASTN svgBLASTP svg
NC_015563:46294364629436465219622761Delftia sp. Cs1-4 chromosome, complete genome7e-36161BLASTN svgBLASTP svg
NC_015684:362236*36223640024938014Oligotropha carboxidovorans OM5 chromosome, complete genome7e-36161BLASTN svgBLASTP svg
NC_007958:830000*83000086140231403Rhodopseudomonas palustris BisB5, complete genome4e-34155BLASTN svgBLASTP svg
NC_010338:4530403*4530403455419223790Caulobacter sp. K31, complete genome4e-34155BLASTN svgBLASTP svg
NC_010725:5491491*5491491552462633136Methylobacterium populi BJ001, complete genome4e-34155BLASTN svgBLASTP svg
NC_011757:1532047*1532047155075218706Methylobacterium chloromethanicum CM4, complete genome4e-34155BLASTN svgBLASTP svg
NC_012808:1122341*1122341115920936869Methylobacterium extorquens AM1, complete genome4e-34155BLASTN svgBLASTP svg
NC_009937:3748885*3748885376963220748Azorhizobium caulinodans ORS 571, complete genome1e-28137BLASTN svgBLASTP svg
NC_015580:3834244*3834244385840724164Novosphingobium sp. PP1Y, complete genome4e-22115BLASTN svgBLASTP svg
NC_003317:1030220*1030220105366423445Brucella melitensis 16M chromosome I, complete sequence1e-21113BLASTN svgBLASTP svg
NC_008228:372520*37252039209919580Pseudoalteromonas atlantica T6c, complete genome1e-21113BLASTN svgBLASTP svg
NC_009720:583060*58306060772824669Xanthobacter autotrophicus Py2, complete genome1e-21113BLASTN svgBLASTP svg
NC_014414:1104386*1104386112320218817Parvularcula bermudensis HTCC2503 chromosome, complete genome1e-21113BLASTN svgBLASTP svg
NC_014817:142976*14297616583322858Asticcacaulis excentricus CB 48 chromosome 2, complete sequence1e-21113BLASTN svgBLASTP svg
NC_014010:1392536*1392536145077158236Candidatus Puniceispirillum marinum IMCC1322 chromosome, complete4e-19105BLASTN svgBLASTP svg
NC_013209:2248119*2248119229545347335Acetobacter pasteurianus IFO 3283-01, complete genome4e-19105BLASTN svgBLASTP svg
NC_010557:31600031600033917223173Burkholderia ambifaria MC40-6 chromosome 3, complete sequence4e-19105BLASTN svgBLASTP svg
NC_003296:14088914088916133820450Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete6e-18101BLASTN svgBLASTP svg
NC_008740:443274*44327451891675643Marinobacter aquaeolei VT8, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_007778:5079500*5079500510170222203Rhodopseudomonas palustris HaA2, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_009439:31040003104000312885524856Pseudomonas mendocina ymp, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_010505:4820000*4820000485884138842Methylobacterium radiotolerans JCM 2831, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_011662:38616238616243991353752Thauera sp. MZ1T, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_012721:26948292694829272122926401Burkholderia glumae BGR1 chromosome 2, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_011206:22391092239109225942920321Acidithiobacillus ferrooxidans ATCC 53993, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_015733:42539614253961427610922149Pseudomonas putida S16 chromosome, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_007712:4067500*4067500409105923560Sodalis glossinidius str. 'morsitans', complete genome3e-1385.7BLASTN svgBLASTP svg
NC_009720:50790485079048510209923052Xanthobacter autotrophicus Py2, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_009952:1680682*1680682171856437883Dinoroseobacter shibae DFL 12, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_008463:3503576*3503576352773524160Pseudomonas aeruginosa UCBPP-PA14, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_002516:21131862113186213336720182Pseudomonas aeruginosa PAO1, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_011757:15535001553500157885725358Methylobacterium chloromethanicum CM4, complete genome8e-1177.8BLASTN svgBLASTP svg
NC_003047:3202125*3202125322912727003Sinorhizobium meliloti 1021, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_008781:654289*65428967826423976Polaromonas naphthalenivorans CJ2, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_013722:30814593081459310680725349Xanthomonas albilineans, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_012792:96229296229299068328392Variovorax paradoxus S110 chromosome 2, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_011206:1379068*1379068140505225985Acidithiobacillus ferrooxidans ATCC 53993, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_007626:35222653522265361842896164Magnetospirillum magneticum AMB-1, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_006177:22114582211458223421022753Symbiobacterium thermophilum IAM 14863, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_007519:33557683355768338139525628Desulfovibrio alaskensis G20 chromosome, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_008027:36775003677500369685019351Pseudomonas entomophila L48, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_010682:28841528841531019821784Ralstonia pickettii 12J chromosome 1, complete sequence5e-0971.9BLASTN svgBLASTP svg
NC_011666:2109274*2109274213911129838Methylocella silvestris BL2, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_011757:34862833486283352762441342Methylobacterium chloromethanicum CM4, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_011757:5048714*5048714509121342500Methylobacterium chloromethanicum CM4, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_011770:3735162*3735162376383628675Pseudomonas aeruginosa LESB58, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_012560:42019694201969423232530357Azotobacter vinelandii DJ, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_014323:43552664355266437857423309Herbaspirillum seropedicae SmR1 chromosome, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_021150:42019654201965423232130357Azotobacter vinelandii CA6, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_009512:469000*46900049317124172Pseudomonas putida F1, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_014623:6950638*6950638697978129144Stigmatella aurantiaca DW4/3-1 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_015376:32497733249773327345123679Burkholderia gladioli BSR3 chromosome chromosome 2, complete2e-0869.9BLASTN svgBLASTP svg
NC_015711:48113494811349483521923871Myxococcus fulvus HW-1 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_020126:6738959*6738959675803819080Myxococcus stipitatus DSM 14675, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_007298:17598811759881180860548725Dechloromonas aromatica RCB, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_011894:21254742125474214409918626Methylobacterium nodulans ORS 2060, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_013854:33054333054335359923057Azospirillum sp. B510, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_014623:94920009492000951423622237Stigmatella aurantiaca DW4/3-1 chromosome, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_014831:19066911906691195238745697Thermaerobacter marianensis DSM 12885 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_010162:56517465651746567447022725Sorangium cellulosum 'So ce 56', complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010688:28501642850164287100220839Xanthomonas campestris pv. campestris, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010804:996837996837104668249846Burkholderia multivorans ATCC 17616 chromosome 1, complete1e-0663.9BLASTN svgBLASTP svg
NC_011757:51700051700055359936600Methylobacterium chloromethanicum CM4, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_011894:31612893161289320428142993Methylobacterium nodulans ORS 2060, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014972:2798670*2798670282159922930Desulfobulbus propionicus DSM 2032 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015376:33208183320818335828337466Burkholderia gladioli BSR3 chromosome chromosome 2, complete1e-0663.9BLASTN svgBLASTP svg
NC_015947:19373411937341196618728847Burkholderia sp. JV3 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_007498:10721121072112109809925988Pelobacter carbinolicus DSM 2380, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_007517:1561466*1561466159339431929Geobacter metallireducens GS-15, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_008095:86987668698766872823629471Myxococcus xanthus DK 1622, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_011901:24663602466360251915552796Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete5e-0661.9BLASTN svgBLASTP svg
NC_014972:25031072503107252314120035Desulfobulbus propionicus DSM 2032 chromosome, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_015138:4205986*4205986423312827143Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete5e-0661.9BLASTN svgBLASTP svg
NC_015733:443122*44312246159918478Pseudomonas putida S16 chromosome, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_004578:568236*56823659272224487Pseudomonas syringae pv. tomato str. DC3000, complete genome5e-0661.9BLASTN svgBLASTP svg