Some Help

Query: NC_017249:8576294 Bradyrhizobium japonicum USDA 6, complete genome

Start: 8576294, End: 8616037, Length: 39744

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004463:16830001683000171788734888Bradyrhizobium japonicum USDA 110, complete genome029420BLASTN svgBLASTP svg
NC_004463:17490001749000176859919600Bradyrhizobium japonicum USDA 110, complete genome01653BLASTN svgBLASTP svg
NC_004463:1992000*1992000204369751698Bradyrhizobium japonicum USDA 110, complete genome01651BLASTN svgBLASTP svg
NC_004463:18725371872537189486322327Bradyrhizobium japonicum USDA 110, complete genome01628BLASTN svgBLASTP svg
NC_004463:20595002059500207783918340Bradyrhizobium japonicum USDA 110, complete genome01618BLASTN svgBLASTP svg
NC_020453:68215006821500685438832889Agromonas oligotrophica S58 DNA, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_011757:4030346*4030346406130430959Methylobacterium chloromethanicum CM4, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_010172:3946644*3946644397036123718Methylobacterium extorquens PA1, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_010172:38946523894652393647541824Methylobacterium extorquens PA1, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_021172:3786725*3786725381099924275Hyphomicrobium denitrificans 1NES1, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_009937:4768500*4768500479259924100Azorhizobium caulinodans ORS 571, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_008027:36775003677500369685019351Pseudomonas entomophila L48, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_014313:3617910*3617910364299925090Hyphomicrobium denitrificans ATCC 51888 chromosome, complete2e-0869.9BLASTN svgBLASTP svg
NC_007964:36384153638415366224323829Nitrobacter hamburgensis X14, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_019973:5899142*5899142593179432653Mesorhizobium australicum WSM2073, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_015675:64934446493444653829644853Mesorhizobium opportunistum WSM2075 chromosome, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_014923:59701825970182600283732656Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete5e-0661.9BLASTN svgBLASTP svg