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Query: NC_017249:8510121 Bradyrhizobium japonicum USDA 6, complete genome

Start: 8510121, End: 8552599, Length: 42479

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004463:17178901717890174815230263Bradyrhizobium japonicum USDA 110, complete genome013000BLASTN svgBLASTP svg
NC_004463:17490001749000176859919600Bradyrhizobium japonicum USDA 110, complete genome011290BLASTN svgBLASTP svg
NC_008786:1298817*1298817132410025284Verminephrobacter eiseniae EF01-2, complete genome9e-54220BLASTN svgBLASTP svg
NC_009076:35645003564500360973145232Burkholderia pseudomallei 1106a chromosome I, complete sequence4e-31145BLASTN svgBLASTP svg
NC_010172:38946523894652393647541824Methylobacterium extorquens PA1, complete genome4e-1695.6BLASTN svgBLASTP svg
NC_004463:16830001683000171788734888Bradyrhizobium japonicum USDA 110, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_010172:3946644*3946644397036123718Methylobacterium extorquens PA1, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_011757:4030346*4030346406130430959Methylobacterium chloromethanicum CM4, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_020453:68215006821500685438832889Agromonas oligotrophica S58 DNA, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_014365:28431262843126287814035015Desulfarculus baarsii DSM 2075 chromosome, complete genome9e-1487.7BLASTN svgBLASTP svg
NC_007964:36384153638415366224323829Nitrobacter hamburgensis X14, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_009648:5119271*5119271515776838498Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome1e-0663.9BLASTN svgBLASTP svg