Pre_GI: BLASTN Hits

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Query: NC_017249:8483159 Bradyrhizobium japonicum USDA 6, complete genome

Start: 8483159, End: 8508908, Length: 25750

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004463:17490001749000176859919600Bradyrhizobium japonicum USDA 110, complete genome017880BLASTN svgBLASTP svg
NC_009076:35645003564500360973145232Burkholderia pseudomallei 1106a chromosome I, complete sequence1e-45192BLASTN svgBLASTP svg
NC_011757:4030346*4030346406130430959Methylobacterium chloromethanicum CM4, complete genome1e-30143BLASTN svgBLASTP svg
NC_010172:3946644*3946644397036123718Methylobacterium extorquens PA1, complete genome1e-30143BLASTN svgBLASTP svg
NC_008786:1298817*1298817132410025284Verminephrobacter eiseniae EF01-2, complete genome6e-29137BLASTN svgBLASTP svg
NC_008782:2326439*2326439236857442136Acidovorax sp. JS42, complete genome1e-23119BLASTN svgBLASTP svg
NC_008554:46995774699577472233422758Syntrophobacter fumaroxidans MPOB, complete genome4e-21111BLASTN svgBLASTP svg
NC_004463:16830001683000171788734888Bradyrhizobium japonicum USDA 110, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_020453:68215006821500685438832889Agromonas oligotrophica S58 DNA, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_010172:38946523894652393647541824Methylobacterium extorquens PA1, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_012587:2326000*2326000234764221643Rhizobium sp. NGR234, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_003047:2477810*2477810250031722508Sinorhizobium meliloti 1021, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_014923:2439197*2439197246272623530Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete1e-1489.7BLASTN svgBLASTP svg
NC_015675:2567000*2567000258988822889Mesorhizobium opportunistum WSM2075 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_019973:2417000*2417000243959922600Mesorhizobium australicum WSM2073, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_007761:3047321*3047321306564218322Rhizobium etli CFN 42, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_014365:28431262843126287814035015Desulfarculus baarsii DSM 2075 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007925:39113233911323393315121829Rhodopseudomonas palustris BisB18, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_004463:17725411772541179709924559Bradyrhizobium japonicum USDA 110, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007964:36384153638415366224323829Nitrobacter hamburgensis X14, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007406:33540003354000337855624557Nitrobacter winogradskyi Nb-255, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007493:546000*54600056875722758Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence8e-0763.9BLASTN svgBLASTP svg
NC_010572:54450815445081548674141661Streptomyces griseus subsp. griseus NBRC 13350, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_006177:14229321422932144704424113Symbiobacterium thermophilum IAM 14863, complete genome3e-0661.9BLASTN svgBLASTP svg