Query: NC_017249:8137586 Bradyrhizobium japonicum USDA 6, complete genome
Start: 8137586, End: 8160961, Length: 23376
Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria
General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_004463:2118000 | 2118000 | 2140099 | 22100 | Bradyrhizobium japonicum USDA 110, complete genome | 0 | 28660 | BLASTN svg | BLASTP svg |
NC_004463:2059500 | 2059500 | 2077839 | 18340 | Bradyrhizobium japonicum USDA 110, complete genome | 0 | 5858 | BLASTN svg | BLASTP svg |
NC_004463:1872537 | 1872537 | 1894863 | 22327 | Bradyrhizobium japonicum USDA 110, complete genome | 0 | 1907 | BLASTN svg | BLASTP svg |
NC_004463:1898648 | 1898648 | 1964255 | 65608 | Bradyrhizobium japonicum USDA 110, complete genome | 0 | 1873 | BLASTN svg | BLASTP svg |
NC_004463:1992000* | 1992000 | 2043697 | 51698 | Bradyrhizobium japonicum USDA 110, complete genome | 0 | 1653 | BLASTN svg | BLASTP svg |
NC_004463:1749000 | 1749000 | 1768599 | 19600 | Bradyrhizobium japonicum USDA 110, complete genome | 0 | 1637 | BLASTN svg | BLASTP svg |
NC_004463:2158116 | 2158116 | 2236099 | 77984 | Bradyrhizobium japonicum USDA 110, complete genome | 0 | 1265 | BLASTN svg | BLASTP svg |
NC_004463:9031331 | 9031331 | 9049790 | 18460 | Bradyrhizobium japonicum USDA 110, complete genome | 2e-59 | 238 | BLASTN svg | BLASTP svg |
NC_015684:3157941 | 3157941 | 3184099 | 26159 | Oligotropha carboxidovorans OM5 chromosome, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_011386:931140 | 931140 | 962307 | 31168 | Oligotropha carboxidovorans OM5, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_019892:5613436 | 5613436 | 5636387 | 22952 | Singulisphaera acidiphila DSM 18658 chromosome, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_015563:1951368 | 1951368 | 1996176 | 44809 | Delftia sp. Cs1-4 chromosome, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_012483:3731542 | 3731542 | 3807085 | 75544 | Acidobacterium capsulatum ATCC 51196, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_007406:2615916 | 2615916 | 2638523 | 22608 | Nitrobacter winogradskyi Nb-255, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_007406:3354000 | 3354000 | 3378556 | 24557 | Nitrobacter winogradskyi Nb-255, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_016023:579000* | 579000 | 606770 | 27771 | Bacillus coagulans 36D1 chromosome, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_011146:3426500 | 3426500 | 3478588 | 52089 | Geobacter bemidjiensis Bem, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_015057:361902 | 361902 | 384099 | 22198 | Acidobacterium sp. MP5ACTX9 plasmid pACIX901, complete sequence | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_003919:2956404 | 2956404 | 2978074 | 21671 | Xanthomonas axonopodis pv. citri str. 306, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_011758:247666 | 247666 | 266638 | 18973 | Methylobacterium chloromethanicum CM4 plasmid pMCHL01, complete | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_014836:1052214* | 1052214 | 1076589 | 24376 | Desulfurispirillum indicum S5 chromosome, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015160:4356686 | 4356686 | 4378145 | 21460 | Odoribacter splanchnicus DSM 20712 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_008435:1131242* | 1131242 | 1180222 | 48981 | Rhodopseudomonas palustris BisA53, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_007508:3065621 | 3065621 | 3091258 | 25638 | Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_007508:2756945 | 2756945 | 2779317 | 22373 | Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_007406:857625 | 857625 | 887291 | 29667 | Nitrobacter winogradskyi Nb-255, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |