Pre_GI: BLASTN Hits

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Query: NC_017249:8137586 Bradyrhizobium japonicum USDA 6, complete genome

Start: 8137586, End: 8160961, Length: 23376

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004463:21180002118000214009922100Bradyrhizobium japonicum USDA 110, complete genome028660BLASTN svgBLASTP svg
NC_004463:20595002059500207783918340Bradyrhizobium japonicum USDA 110, complete genome05858BLASTN svgBLASTP svg
NC_004463:18725371872537189486322327Bradyrhizobium japonicum USDA 110, complete genome01907BLASTN svgBLASTP svg
NC_004463:18986481898648196425565608Bradyrhizobium japonicum USDA 110, complete genome01873BLASTN svgBLASTP svg
NC_004463:1992000*1992000204369751698Bradyrhizobium japonicum USDA 110, complete genome01653BLASTN svgBLASTP svg
NC_004463:17490001749000176859919600Bradyrhizobium japonicum USDA 110, complete genome01637BLASTN svgBLASTP svg
NC_004463:21581162158116223609977984Bradyrhizobium japonicum USDA 110, complete genome01265BLASTN svgBLASTP svg
NC_004463:90313319031331904979018460Bradyrhizobium japonicum USDA 110, complete genome2e-59238BLASTN svgBLASTP svg
NC_015684:31579413157941318409926159Oligotropha carboxidovorans OM5 chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_011386:93114093114096230731168Oligotropha carboxidovorans OM5, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_019892:56134365613436563638722952Singulisphaera acidiphila DSM 18658 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_015563:19513681951368199617644809Delftia sp. Cs1-4 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_012483:37315423731542380708575544Acidobacterium capsulatum ATCC 51196, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007406:26159162615916263852322608Nitrobacter winogradskyi Nb-255, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_007406:33540003354000337855624557Nitrobacter winogradskyi Nb-255, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_016023:579000*57900060677027771Bacillus coagulans 36D1 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_011146:34265003426500347858852089Geobacter bemidjiensis Bem, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015057:36190236190238409922198Acidobacterium sp. MP5ACTX9 plasmid pACIX901, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_003919:29564042956404297807421671Xanthomonas axonopodis pv. citri str. 306, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011758:24766624766626663818973Methylobacterium chloromethanicum CM4 plasmid pMCHL01, complete4e-0867.9BLASTN svgBLASTP svg
NC_014836:1052214*1052214107658924376Desulfurispirillum indicum S5 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015160:43566864356686437814521460Odoribacter splanchnicus DSM 20712 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008435:1131242*1131242118022248981Rhodopseudomonas palustris BisA53, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007508:30656213065621309125825638Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007508:27569452756945277931722373Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007406:85762585762588729129667Nitrobacter winogradskyi Nb-255, complete genome3e-0661.9BLASTN svgBLASTP svg