Pre_GI: BLASTN Hits

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Query: NC_017249:7917586 Bradyrhizobium japonicum USDA 6, complete genome

Start: 7917586, End: 7991099, Length: 73514

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004463:23441282344128236509920972Bradyrhizobium japonicum USDA 110, complete genome036370BLASTN svgBLASTP svg
NC_004463:22624672262467231174249276Bradyrhizobium japonicum USDA 110, complete genome027330BLASTN svgBLASTP svg
NC_004463:18986481898648196425565608Bradyrhizobium japonicum USDA 110, complete genome01078BLASTN svgBLASTP svg
NC_004463:18497184974626527769Bradyrhizobium japonicum USDA 110, complete genome0835BLASTN svgBLASTP svg
NC_004463:1992000*1992000204369751698Bradyrhizobium japonicum USDA 110, complete genome0783BLASTN svgBLASTP svg
NC_013855:558831*55883158109922269Azospirillum sp. B510 plasmid pAB510a, complete sequence1e-162583BLASTN svgBLASTP svg
NC_011894:31612893161289320428142993Methylobacterium nodulans ORS 2060, complete genome2e-71280BLASTN svgBLASTP svg
NC_009720:44069914406991444791640926Xanthobacter autotrophicus Py2, complete genome2e-31147BLASTN svgBLASTP svg
NC_011892:35265235265237609923448Methylobacterium nodulans ORS 2060 plasmid pMNOD01, complete1e-26131BLASTN svgBLASTP svg
NC_015677:285896*28589630970623811Ramlibacter tataouinensis TTB310 chromosome, complete genome2e-25127BLASTN svgBLASTP svg
NC_012207:83103083103085360922580Mycobacterium bovis BCG str. Tokyo 172, complete genome4e-23119BLASTN svgBLASTP svg
NC_009565:83307683307685178218707Mycobacterium tuberculosis F11, complete genome4e-23119BLASTN svgBLASTP svg
NC_009525:83051383051384921918707Mycobacterium tuberculosis H37Ra, complete genome4e-23119BLASTN svgBLASTP svg
NC_008769:86067086067087969619027Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome4e-23119BLASTN svgBLASTP svg
NC_002945:83102983102985365622628Mycobacterium bovis AF2122/97, complete genome4e-23119BLASTN svgBLASTP svg
NC_002755:83139783139785005418658Mycobacterium tuberculosis CDC1551, complete genome4e-23119BLASTN svgBLASTP svg
NC_007958:830000*83000086140231403Rhodopseudomonas palustris BisB5, complete genome3e-18103BLASTN svgBLASTP svg
NC_008595:25466962546696258480338108Mycobacterium avium 104, complete genome3e-18103BLASTN svgBLASTP svg
NC_003295:27873712787371282580238432Ralstonia solanacearum GMI1000, complete genome1e-17101BLASTN svgBLASTP svg
NC_020453:18819041881904191720635303Agromonas oligotrophica S58 DNA, complete genome4e-1799.6BLASTN svgBLASTP svg
NC_011887:11061811061813688826271Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete6e-1695.6BLASTN svgBLASTP svg
NC_014323:43552664355266437857423309Herbaspirillum seropedicae SmR1 chromosome, complete genome2e-1593.7BLASTN svgBLASTP svg
NC_007517:3751107*3751107377256321457Geobacter metallireducens GS-15, complete genome2e-1593.7BLASTN svgBLASTP svg
NC_009512:59209605920960595518534226Pseudomonas putida F1, complete genome1e-1491.7BLASTN svgBLASTP svg
NC_007925:39337653933765395524721483Rhodopseudomonas palustris BisB18, complete genome2e-1387.7BLASTN svgBLASTP svg
NC_009075:2428248*2428248244904320796Burkholderia pseudomallei 668 chromosome II, complete sequence2e-1283.8BLASTN svgBLASTP svg
NC_007925:42944724294472431768023209Rhodopseudomonas palustris BisB18, complete genome2e-1283.8BLASTN svgBLASTP svg
NC_007643:95536295536297459919238Rhodospirillum rubrum ATCC 11170, complete genome2e-1283.8BLASTN svgBLASTP svg
NC_006351:2398403*2398403241919020788Burkholderia pseudomallei K96243 chromosome 2, complete sequence2e-1283.8BLASTN svgBLASTP svg
NC_004463:76834267683426770287319448Bradyrhizobium japonicum USDA 110, complete genome2e-1283.8BLASTN svgBLASTP svg
NC_018691:30820003082000310649724498Alcanivorax dieselolei B5 chromosome, complete genome9e-1281.8BLASTN svgBLASTP svg
NC_010552:24547762454776248709932324Burkholderia ambifaria MC40-6 chromosome 2, complete sequence4e-1179.8BLASTN svgBLASTP svg
NC_012560:13220001322000135714535146Azotobacter vinelandii DJ, complete genome4e-1179.8BLASTN svgBLASTP svg
NC_021150:13220001322000135715735158Azotobacter vinelandii CA6, complete genome4e-1179.8BLASTN svgBLASTP svg
NC_003317:1030220*1030220105366423445Brucella melitensis 16M chromosome I, complete sequence6e-1075.8BLASTN svgBLASTP svg
NC_012808:1122341*1122341115920936869Methylobacterium extorquens AM1, complete genome6e-1075.8BLASTN svgBLASTP svg
NC_012808:4137000*4137000416801731018Methylobacterium extorquens AM1, complete genome6e-1075.8BLASTN svgBLASTP svg
NC_012808:58701*587018490626206Methylobacterium extorquens AM1, complete genome6e-1075.8BLASTN svgBLASTP svg
NC_012811:11388971138897115709918203Methylobacterium extorquens AM1 megaplasmid, complete sequence6e-1075.8BLASTN svgBLASTP svg
NC_013757:28583272858327287756419238Geodermatophilus obscurus DSM 43160, complete genome6e-1075.8BLASTN svgBLASTP svg
NC_010002:29339092933909297250438596Delftia acidovorans SPH-1, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_007626:10910001091000111043819439Magnetospirillum magneticum AMB-1, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_009720:41242554124255415127427020Xanthobacter autotrophicus Py2, complete genome9e-0971.9BLASTN svgBLASTP svg
NC_014924:2399524*2399524243305533532Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome9e-0971.9BLASTN svgBLASTP svg
NC_015556:2265940*2265940233644770508Pseudomonas fulva 12-X chromosome, complete genome9e-0971.9BLASTN svgBLASTP svg
NC_010943:1332243*1332243137790845666Stenotrophomonas maltophilia K279a, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_007925:39113233911323393315121829Rhodopseudomonas palustris BisB18, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_007963:26449302644930268018935260Chromohalobacter salexigens DSM 3043, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_008435:1215437*1215437131209196655Rhodopseudomonas palustris BisA53, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_009720:12488661248866127253723672Xanthobacter autotrophicus Py2, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_009720:216589*21658924097524387Xanthobacter autotrophicus Py2, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_010801:48160148160150140619806Burkholderia multivorans ATCC 17616 chromosome 3, complete2e-0663.9BLASTN svgBLASTP svg
NC_010805:57570957570964147565767Burkholderia multivorans ATCC 17616 chromosome 2, complete2e-0663.9BLASTN svgBLASTP svg
NC_011992:37528673752867377559922733Acidovorax ebreus TPSY, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_014414:16780316780318582918027Parvularcula bermudensis HTCC2503 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_010086:18163781816378188976873391Burkholderia multivorans ATCC 17616 chromosome 2, complete2e-0663.9BLASTN svgBLASTP svg
NC_010087:376918*37691844748870571Burkholderia multivorans ATCC 17616 chromosome 3, complete2e-0663.9BLASTN svgBLASTP svg
NC_007951:20873852087385211670629322Burkholderia xenovorans LB400 chromosome 1, complete sequence9e-0661.9BLASTN svgBLASTP svg
NC_007951:2206263*2206263222784621584Burkholderia xenovorans LB400 chromosome 1, complete sequence9e-0661.9BLASTN svgBLASTP svg
NC_007951:76950076950079672027221Burkholderia xenovorans LB400 chromosome 1, complete sequence9e-0661.9BLASTN svgBLASTP svg
NC_007952:32382413238241325679118551Burkholderia xenovorans LB400 chromosome 2, complete sequence9e-0661.9BLASTN svgBLASTP svg
NC_014910:24284524284528559942755Alicycliphilus denitrificans BC chromosome, complete genome9e-0661.9BLASTN svgBLASTP svg
NC_007951:19289061928906195286323958Burkholderia xenovorans LB400 chromosome 1, complete sequence9e-0661.9BLASTN svgBLASTP svg