Pre_GI: BLASTN Hits

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Query: NC_017249:7341428 Bradyrhizobium japonicum USDA 6, complete genome

Start: 7341428, End: 7365320, Length: 23893

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004463:76834267683426770287319448Bradyrhizobium japonicum USDA 110, complete genome0763BLASTN svgBLASTP svg
NC_008435:1215437*1215437131209196655Rhodopseudomonas palustris BisA53, complete genome0753BLASTN svgBLASTP svg
NC_010524:2761394*2761394278436822975Leptothrix cholodnii SP-6, complete genome1e-26129BLASTN svgBLASTP svg
NC_007298:16664801666480168561319134Dechloromonas aromatica RCB, complete genome2e-22115BLASTN svgBLASTP svg
NC_008313:88624888624891786931622Ralstonia eutropha H16 chromosome 1, complete sequence5e-20107BLASTN svgBLASTP svg
NC_008314:1465643*1465643151598150339Ralstonia eutropha H16 chromosome 2, complete sequence5e-20107BLASTN svgBLASTP svg
NC_014323:24597924597926763821660Herbaspirillum seropedicae SmR1 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_015185:1414453*1414453144663332181Desulfurobacterium thermolithotrophum DSM 11699 chromosome,8e-1693.7BLASTN svgBLASTP svg
NC_015731:3658956*3658956368280423849Nitrosomonas sp. Is79A3 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_004842:1132441*1132441116265130211Anaplasma marginale str. St. Maries, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010501:36715173671517370459933083Pseudomonas putida W619, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_012026:1135041*1135041116545030410Anaplasma marginale str. Florida, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014758:1387470*1387470141004622577Calditerrivibrio nitroreducens DSM 19672 chromosome, complete2e-1385.7BLASTN svgBLASTP svg
NC_020453:17854731785473180825422782Agromonas oligotrophica S58 DNA, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_003911:4001094*4001094403346532372Silicibacter pomeroyi DSS-3, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_010337:565730*56573058815822429Heliobacterium modesticaldum Ice1, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_009937:1733196*1733196175210518910Azorhizobium caulinodans ORS 571, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014973:3151701*3151701317705425354Geobacter sp. M18 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_004310:508483*50848353488526403Brucella suis 1330 chromosome I, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_006932:531000*53100055709926100Brucella abortus biovar 1 str. 9-941 chromosome I, complete2e-1075.8BLASTN svgBLASTP svg
NC_007618:52640052640055279626397Brucella melitensis biovar Abortus 2308 chromosome I, complete2e-1075.8BLASTN svgBLASTP svg
NC_010103:507482*50748253233624855Brucella canis ATCC 23365 chromosome I, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_010169:527500*52750055287125372Brucella suis ATCC 23445 chromosome I, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_010742:529500*52950055481725318Brucella abortus S19 chromosome 1, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_010995:764567*76456778991125345Cellvibrio japonicus Ueda107, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015857:531314*53131455683525522Brucella pinnipedialis B2/94 chromosome chromosome 1, complete2e-1075.8BLASTN svgBLASTP svg
NC_008825:28899332889933292316233230Methylibium petroleiphilum PM1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_010337:2793667*2793667283013736471Heliobacterium modesticaldum Ice1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_011757:51027325102732513806935338Methylobacterium chloromethanicum CM4, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_011757:97281*9728112674229462Methylobacterium chloromethanicum CM4, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_012673:2368971*2368971238860519635Exiguobacterium sp. AT1b, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_016026:19697661969766200354933784Micavibrio aeruginosavorus ARL-13 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_012673:2023297*2023297204277319477Exiguobacterium sp. AT1b, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_002939:20083042008304204522736924Geobacter sulfurreducens PCA, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014006:18620001862000188907327074Sphingobium japonicum UT26S chromosome 1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014829:178000*17800020009922100Bacillus cellulosilyticus DSM 2522 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_013854:16869971686997170921322217Azospirillum sp. B510, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007517:1468719*1468719150798939271Geobacter metallireducens GS-15, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_010424:1563033*1563033159550932477Candidatus Desulforudis audaxviator MP104C, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013446:4723380*4723380475330129922Comamonas testosteroni CNB-2, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015275:566000*56600059144025441Clostridium lentocellum DSM 5427 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012416:852000*85200087409922100Wolbachia sp. wRi, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_016002:3077648*3077648310047122824Pseudogulbenkiania sp. NH8B, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015573:569625*56962560324033616Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg