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Query: NC_017249:4365935 Bradyrhizobium japonicum USDA 6, complete genome

Start: 4365935, End: 4385176, Length: 19242

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011757:39881*398817409934219Methylobacterium chloromethanicum CM4, complete genome5e-35157BLASTN svgBLASTP svg
NC_016027:17763001776300179534419045Gluconacetobacter xylinus NBRC 3288, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_011894:50569015056901510729350393Methylobacterium nodulans ORS 2060, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_010505:55254615525461557227846818Methylobacterium radiotolerans JCM 2831, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_004463:90313319031331904979018460Bradyrhizobium japonicum USDA 110, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015376:32497733249773327345123679Burkholderia gladioli BSR3 chromosome chromosome 2, complete1e-0765.9BLASTN svgBLASTP svg
NC_015976:24060362406036242731421279Sphingobium sp. SYK-6, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_016027:2387832*2387832241009922268Gluconacetobacter xylinus NBRC 3288, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015259:1803266*1803266182644223177Polymorphum gilvum SL003B-26A1 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_010172:37120003712000373446522466Methylobacterium extorquens PA1, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_007964:2762000*2762000278109919100Nitrobacter hamburgensis X14, complete genome2e-0661.9BLASTN svgBLASTP svg