Pre_GI: BLASTN Hits

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Query: NC_017249:3267500 Bradyrhizobium japonicum USDA 6, complete genome

Start: 3267500, End: 3290591, Length: 23092

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_020453:896458*89645891917822721Agromonas oligotrophica S58 DNA, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020453:68215006821500685438832889Agromonas oligotrophica S58 DNA, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_004463:76834267683426770287319448Bradyrhizobium japonicum USDA 110, complete genome0747BLASTN svgBLASTP svg
NC_004463:17490001749000176859919600Bradyrhizobium japonicum USDA 110, complete genome9e-28133BLASTN svgBLASTP svg
NC_004463:16830001683000171788734888Bradyrhizobium japonicum USDA 110, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_019973:2417000*2417000243959922600Mesorhizobium australicum WSM2073, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014923:2439197*2439197246272623530Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete7e-1073.8BLASTN svgBLASTP svg
NC_015675:2567000*2567000258988822889Mesorhizobium opportunistum WSM2075 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_011757:4030346*4030346406130430959Methylobacterium chloromethanicum CM4, complete genome2e-25125BLASTN svgBLASTP svg
NC_010172:3946644*3946644397036123718Methylobacterium extorquens PA1, complete genome2e-25125BLASTN svgBLASTP svg
NC_010172:38946523894652393647541824Methylobacterium extorquens PA1, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_007761:3047321*3047321306564218322Rhizobium etli CFN 42, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_012587:2326000*2326000234764221643Rhizobium sp. NGR234, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_003047:2477810*2477810250031722508Sinorhizobium meliloti 1021, complete genome7e-1073.8BLASTN svgBLASTP svg