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Query: NC_017249:2572000 Bradyrhizobium japonicum USDA 6, complete genome

Start: 2572000, End: 2593717, Length: 21718

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004463:57224685722468574221819751Bradyrhizobium japonicum USDA 110, complete genome3e-175622BLASTN svgBLASTP svg
NC_008435:1215437*1215437131209196655Rhodopseudomonas palustris BisA53, complete genome1e-32149BLASTN svgBLASTP svg
NC_010505:21038872103887213081426928Methylobacterium radiotolerans JCM 2831, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_013093:2599591*2599591261994820358Actinosynnema mirum DSM 43827, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009664:53302153302155868925669Kineococcus radiotolerans SRS30216, complete genome2e-0765.9BLASTN svgBLASTP svg