Some Help

Query: NC_017249:8510121:8538185 Bradyrhizobium japonicum USDA 6, complete genome

Start: 8538185, End: 8539384, Length: 1200

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007964:3638415:3655484365548436566981215Nitrobacter hamburgensis X14, complete genomephage integrase4e-99362
NC_017249:8510121:855152085515208552374855Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein2e-79296
NC_004463:1717890:174180817418081742662855Bradyrhizobium japonicum USDA 110, complete genomeprobable site-specific integrase/recombinase2e-79296
NC_012988:4262631:4283693428369342850181326Methylobacterium extorquens DM4, complete genomePhage integrase3e-62239
NC_012988:4262631:428275942827594283718960Methylobacterium extorquens DM4, complete genomePhage integrase2e-59229
NC_007626:3996000:400655640065564007533978Magnetospirillum magneticum AMB-1, complete genomeIntegrase1e-1997.8
NC_012808:1979000:1994483199448319958051323Methylobacterium extorquens AM1, complete genomeputative Integrase1e-1791.3
NC_011369:1135592:1180073118007311811791107Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, completeintegrase family protein8e-1168.6
NC_006350:3957454:396679739667973967651855Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative bacteriophage integrase5e-0962.8
NC_004463:1717890:174264017426401743035396Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein1e-0861.6