Pre_GI: BLASTP Hits

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Query: NC_017249:8510121:8510121 Bradyrhizobium japonicum USDA 6, complete genome

Start: 8510121, End: 8514059, Length: 3939

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008786:1298817:1303927130392713082854359Verminephrobacter eiseniae EF01-2, complete genomehypothetical protein01149
NC_009076:3564500:3588455358845535928404386Burkholderia pseudomallei 1106a chromosome I, complete sequencehypothetical protein01130
NC_009648:5119271:5147740514774051518104071Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeATP phosphoribosyltransferase01108
NC_012731:600518:6340556340556380864032Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeATP phosphoribosyltransferase01103
NC_008782:2326439:2326439232643923289792541Acidovorax sp. JS42, complete genomehypothetical protein0972
NC_014365:2843126:2868884286888428729844101Desulfarculus baarsii DSM 2075 chromosome, complete genomehypothetical protein0850
NC_011880:56543:7357773577778064230Cyanothece sp. PCC 7425 plasmid pP742501, complete sequencehypothetical protein0840
NC_006350:845513:8818058818058860494245Burkholderia pseudomallei K96243 chromosome 1, complete sequencehypothetical protein0763
NC_014210:3248526:3256610325661032607014092Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,hypothetical protein3e-162573
NC_013510:2937530:2948060294806029521004041Thermomonospora curvata DSM 43183, complete genomehypothetical protein1e-151538
NC_014830:3387479:3405417340541734095024086Intrasporangium calvum DSM 43043 chromosome, complete genomehypothetical protein7e-144512
NC_013235:508585:5085855085855126284044Nakamurella multipartita DSM 44233, complete genomehypothetical protein7e-141502
NC_008782:2326439:2330411233041123319491539Acidovorax sp. JS42, complete genomehypothetical protein7e-140499
NC_018581:2768743:2814836281483628188914056Gordonia sp. KTR9 chromosome, complete genomeType II restriction enzyme, methylase subunits1e-139498
NC_008278:256427:2599032599032642224320Frankia alni ACN14a, complete genomeconserved hypothetical protein; putative N-6 Adenine-specific DNA methylase domain.9e-137489
NC_013530:2492312:2517212251721225213124101Xylanimonas cellulosilytica DSM 15894, complete genomehypothetical protein7e-136486
NC_008146:861319:8923588923588963774020Mycobacterium sp. MCS, complete genomehypothetical protein3e-131470
NC_008705:868623:9010879010879051064020Mycobacterium sp. KMS, complete genomeconserved hypothetical protein3e-131470
NC_013521:345308:3562673562673603104044Sanguibacter keddieii DSM 10542, complete genomehypothetical protein5e-126453
NC_004463:925140:9283659283659322703906Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein4e-121436
NC_020126:2979959:3002814300281430067433930Myxococcus stipitatus DSM 14675, complete genomehypothetical protein2e-115417
NC_008639:1462000:1480653148065314845013849Chlorobium phaeobacteroides DSM 266, complete genomehypothetical protein2e-62241
NC_015510:3543352:3550469355046935551394671Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomehypothetical protein4e-62240
NC_010831:931961:9501289501289540003873Chlorobium phaeobacteroides BS1, complete genomehypothetical protein1e-61239
NC_013510:465188:4737794737794753891611Thermomonospora curvata DSM 43183, complete genomehypothetical protein4e-37157
NC_013440:971717:9717179717179768465130Haliangium ochraceum DSM 14365, complete genomehypothetical protein1e-34149
NC_019974:1115553:1136317113631711405644248Natronococcus occultus SP4, complete genometype I restriction-modification system methyltransferase subunit2e-33145
NC_019792:153661:1605111605111647524242Natronobacterium gregoryi SP2 chromosome, complete genomeN-6 DNA Methylase/Eco57I restriction endonuclease9e-33143
NC_010424:422029:4280804280804328254746Candidatus Desulforudis audaxviator MP104C, complete genomehypothetical protein1e-31139
NC_013946:415028:4218694218694261494281Meiothermus ruber DSM 1279 chromosome, complete genomehypothetical protein1e-30136
NC_005125:2887319:2904118290411829084464329Gloeobacter violaceus PCC 7421, complete genomehypothetical protein2e-30135
NC_012856:2815797:2815797281579728197173921Ralstonia pickettii 12D chromosome 1, complete genomeputative type II DNA modification enzyme1e-29132
NC_013158:1686239:1703027170302717070584032Halorhabdus utahensis DSM 12940, complete genomerestriction/modification enzyme7e-29130
NC_014151:3663295:3666135366613536701033969Cellulomonas flavigena DSM 20109 chromosome, complete genomeputative type II DNA modification enzyme3e-28128
NC_007333:810381:8465718465718505363966Thermobifida fusca YX, complete genomeputative type II DNA modification enzyme8e-28127
NC_012030:165071:1845441845441886714128Halorubrum lacusprofundi ATCC 49239 plasmid pHLAC01, completehypothetical protein6e-27124
NC_008697:55406:7324973249772443996Nocardioides sp. JS614 plasmid pNOCA01, complete sequenceputative type II DNA modification enzyme1e-26123
NC_007645:3934239:3942388394238839466324245Hahella chejuensis KCTC 2396, complete genomeType II restriction enzyme, methylase subunit2e-26122
NC_013595:8603188:8626853862685386309294077Streptosporangium roseum DSM 43021, complete genomeputative type II DNA modification enzyme2e-26122
NC_017278:48630:7631176311803093999Thermus sp. CCB_US3_UF1 chromosome, complete genomehypothetical protein4e-26121
NC_013929:1799594:1808943180894318129744032Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein5e-26120
NC_015572:3091707:3104253310425331086954443Methylomonas methanica MC09 chromosome, complete genomehypothetical protein6e-24114
NC_012030:345837:3835923835923868883297Halorubrum lacusprofundi ATCC 49239 plasmid pHLAC01, completehypothetical protein9e-24113
NC_006677:1596560:1654143165414316589754833Gluconobacter oxydans 621H, complete genomePutative type II DNA modification enzyme1e-23112
NC_008686:1472899:1485429148542914898084380Paracoccus denitrificans PD1222 chromosome 1, complete sequencehypothetical protein1e-23112
NC_007426:1840670:1871431187143118754594029Natronomonas pharaonis DSM 2160, complete genomeprobable restriction/modification enzyme3e-23112
NC_015576:808926:8261128261128286612550Mycobacterium sp. JDM601 chromosome, complete genomehypothetical protein4e-23111
NC_015573:2323268:2323268232326823273084041Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehypothetical protein7e-22107
NC_015711:3122000:3132062313206231360123951Myxococcus fulvus HW-1 chromosome, complete genometype II DNA modification enzyme5e-22107
NC_009921:8215996:8232858823285882369074050Frankia sp. EAN1pec, complete genomeconserved hypothetical protein2e-21105
NC_009434:3611738:3728588372858837334954908Pseudomonas stutzeri A1501, complete genometype II restriction enzyme, methylase subunit9e-21103
NC_004369:3082691:3091247309124730958214575Corynebacterium efficiens YS-314, complete genomehypothetical protein2e-20102
NC_012811:1105395:1108154110815411121433990Methylobacterium extorquens AM1 megaplasmid, complete sequenceputative type II DNA modification enzyme5e-20101
NC_013216:1442044:1450321145032114549944674Desulfotomaculum acetoxidans DSM 771, complete genomehypothetical protein1e-19100
NC_008278:6854759:6877269687726968820534785Frankia alni ACN14a, complete genomeputative Type II restriction enzyme, methylase subunit6e-20100
NC_015576:612164:6209636209636255584596Mycobacterium sp. JDM601 chromosome, complete genomeputative type II restriction enzyme methylase subunit1e-1999.8
NC_015167:2663686:2672070267207026768244755Cellulophaga lytica DSM 7489 chromosome, complete genomeplasmid-like protein2e-1999
NC_010172:280092:2957902957902997583969Methylobacterium extorquens PA1, complete genomeputative type II DNA modification enzyme3e-1998.6
NC_015865:1468689:1478571147857114823893819Thermococcus sp. 4557 chromosome, complete genomehypothetical protein4e-1998.2
NC_013521:345308:360493360493361449957Sanguibacter keddieii DSM 10542, complete genome5e-1997.8
NC_015588:1213873:1242115124211512470674953Isoptericola variabilis 225 chromosome, complete genomehypothetical protein3e-1895.5
NC_017279:29737:4623146231500043774Campylobacter jejuni subsp. jejuni IA3902 chromosome, completetype II restriction-modification enzyme2e-1792.8
NC_014820:1517927:1527616152761615315873972Cenarchaeum symbiosum A, complete genometype II restriction enzyme, methylase subunit2e-1792.4
NC_019962:2736815:2752702275270227566673966Natrinema pellirubrum DSM 15624, complete genometype I restriction-modification system methyltransferase subunit2e-1792.4
NC_019902:2306961:2319086231908623241075022Thioalkalivibrio nitratireducens DSM 14787, complete genomeType II restriction enzyme, methylase subunit2e-1792
NC_014659:1731121:1742631174263117472204590Rhodococcus equi 103S, complete genomehypothetical protein3e-1791.7
NC_017281:30261:4469744697481193423Campylobacter jejuni subsp. jejuni S3 chromosome, complete genomePutative type IIS restriction /modification enzyme, N-terminal protein9e-1790.1
NC_019968:1147409:1158767115876711629424176Prevotella dentalis DSM 3688 chromosome 2, complete sequencehypothetical protein1e-1689.7
NC_011353:5426793:5450290545029054552244935Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein4e-1688.2
NC_013008:5382917:5406351540635154112854935Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein4e-1688.2
NC_013941:5192500:5214907521490752198414935Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein4e-1688.2
NC_013441:27877:3596535965399633999Gordonia bronchialis DSM 43247, complete genomehypothetical protein6e-1687.8
NC_010554:2646806:2713633271363327186034971Proteus mirabilis HI4320, complete genomeplasmid-related protein8e-1687
NC_020388:252500:2734882734882770723585Natronomonas moolapensis 8.8.11 complete genomeprobable restriction/modification enzyme2e-1585.5
NC_013757:3897413:3918472391847239231994728Geodermatophilus obscurus DSM 43160, complete genomehypothetical protein3e-1585.5
NC_006513:148950:1489501489501534854536Azoarcus sp. EbN1, complete genomeN6 adenine-specific DNA methyltransferase4e-1584.7
NC_018679:1738126:1742905174290517478664962Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completeplasmid-like protein9e-1583.6
NC_013929:7278414:7288198728819872933725175Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein1e-1483.2
NC_010815:40357:4147441474442302757Geobacter lovleyi SZ plasmid pGLOV01, complete sequencehypothetical protein2e-1482.4
NC_008740:1459747:1477293147729314825485256Marinobacter aquaeolei VT8, complete genomehypothetical protein3e-1482
NC_013222:1536203:1543931154393115469513021Robiginitalea biformata HTCC2501, complete genometype II restriction enzyme, methylase subunit5e-1481.3
NC_017093:6461486:6467914646791464728604947Actinoplanes missouriensis 431, complete genomehypothetical protein9e-1480.5
NC_014926:1381152:1393971139397113978073837Thermovibrio ammonificans HB-1 chromosome, complete genomehypothetical protein8e-1480.5
NC_015434:3755560:3768253376825337732895037Verrucosispora maris AB-18-032 chromosome, complete genomehypothetical protein3e-1379
NC_013929:2375613:2419372241937224248975526Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein4e-1378.2
NC_014934:219000:2213082213082245083201Cellulophaga algicola DSM 14237 chromosome, complete genomen-6 DNA methylase9e-1377
NC_006347:3390193:3412654341265434164633810Bacteroides fragilis YCH46, complete genomeputative type IIS restriction/modification enzyme1e-1276.3
NC_015957:2755709:2762477276247727674294953Streptomyces violaceusniger Tu 4113 chromosome, complete genomeputative type II restriction enzyme, methylase subunit3e-1275.1
NC_020156:2750000:2753388275338827566093222Nonlabens dokdonensis DSW-6, complete genometype II restriction enzyme, methylase3e-1172
NC_017080:1981788:1992712199271219961883477Phycisphaera mikurensis NBRC 102666, complete genomerestriction endonuclease/modification methylase5e-1171.2
NC_015578:3371171:3379332337933233821872856Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein6e-1067.8
NC_018607:805966:8231478231478261793033Brachyspira pilosicoli B2904 chromosome, complete genomebifunctional endonuclease/methyltransferase9e-0963.9
NC_018939:1583653:1590672159067215945113840Helicobacter pylori 26695 chromosome, complete genometype IIS restriction enzyme R and M protein (ECO57IR)9e-0963.9
NC_000915:1583967:1590649159064915944883840Helicobacter pylori 26695, complete genometype IIS restriction enzyme R and M protein (ECO57IR)9e-0963.9
NC_019908:21970:4149341493445313039Brachyspira pilosicoli P43/6/78 chromosome, complete genomebifunctional endonuclease/methyltransferase1e-0863.5
NC_014330:609982:6197376197376224572721Brachyspira pilosicoli 95/1000 chromosome, complete genomefused endonuclease-methyltransferase1e-0863.5
NC_018604:2053585:2065813206581320686502838Brachyspira pilosicoli WesB complete genomefused endonuclease-methyltransferase9e-0963.5
NC_003911:2042389:2047955204795520508522898Silicibacter pomeroyi DSS-3, complete genomehypothetical protein1e-0863.2
NC_017243:599814:6074866074866103022817Brachyspira intermedia PWS/A chromosome, complete genomebifunctional endonuclease/methyltransferase2e-0862.8
NC_014150:2146887:2150714215071421538903177Brachyspira murdochii DSM 12563 chromosome, complete genomeprotein of unknown function DUF4502e-0862.4
NC_015499:1097432:1117758111775811210663309Thermodesulfobium narugense DSM 14796 chromosome, complete genomehypothetical protein5e-0861.2
NC_012225:1497934:1516857151685715198923036Brachyspira hyodysenteriae WA1, complete genomerestriction enzyme methylase subunit6e-0861.2
NC_010730:1724443:1726422172642217300513630Sulfurihydrogenibium sp. YO3AOP1, complete genomehypothetical protein2e-0758.9
NC_014011:1354261:1360055136005513635013447Aminobacterium colombiense DSM 12261 chromosome, complete genomehypothetical protein3e-0758.5
NC_013890:191616:2058982058982092453348Dehalococcoides sp. GT chromosome, complete genomehypothetical protein5e-0758.2
NC_008554:484267:4926344926344960773444Syntrophobacter fumaroxidans MPOB, complete genomehypothetical protein6e-0757.8
NC_007722:168937:1777891777891803532565Erythrobacter litoralis HTCC2594, complete genometype II restriction enzyme, methylase subunit6e-0757.8
NC_009051:1118486:1143895114389511470053111Methanoculleus marisnigri JR1, complete genomeprotein of unknown function DUF4505e-0654.7
NC_007493:1:5531553168231293Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequenceRNA-binding region RNP-16e-0654.3