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Query: NC_017249:8427163:8442938 Bradyrhizobium japonicum USDA 6, complete genome

Start: 8442938, End: 8444284, Length: 1347

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004463:2059500:2071304207130420730641761Bradyrhizobium japonicum USDA 110, complete genomeputative transposase0811
NC_004463:5722468:5740845574084557422181374Bradyrhizobium japonicum USDA 110, complete genomeputative transposase0662
NC_009937:4350132:4358122435812243594531332Azorhizobium caulinodans ORS 571, complete genomeputative transposase1e-164580
NC_010725:4219500:4235860423586042374641605Methylobacterium populi BJ001, complete genometransposase IS4 family protein3e-125449
NC_009720:251703:258268258268258954687Xanthobacter autotrophicus Py2, complete genomeputative transposase4e-79295
NC_009720:2945655:296458729645872965273687Xanthobacter autotrophicus Py2, complete genomeputative transposase4e-79295
NC_008095:2117952:2125939212593921273001362Myxococcus xanthus DK 1622, complete genometransposase, IS4 family1e-64247
NC_008095:7563441:7572835757283575741961362Myxococcus xanthus DK 1622, complete genometransposase, IS4 family1e-64247
NC_015711:4067905:4083783408378340851441362Myxococcus fulvus HW-1 chromosome, complete genomeIS4 family transposase9e-64244
NC_003296:1696958:1710910171091017122711362Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completeISRSO17-TRANSPOSASE PROTEIN1e-61237
NC_003296:1665569:1680720168072016820811362Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completeISRSO17-TRANSPOSASE PROTEIN1e-61237
NC_003296:1419992:1429007142900714303681362Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completeISRSO17-TRANSPOSASE PROTEIN1e-61237
NC_003296:140889:1459251459251472561332Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completeISRSO17-TRANSPOSASE PROTEIN2e-61237
NC_003296:556836:5899275899275912581332Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completeISRSO17-TRANSPOSASE PROTEIN2e-61237
NC_003296:168506:1804841804841818211338Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completeISRSO17-TRANSPOSASE PROTEIN6e-61235
NC_002678:4885790:490998849099884910527540Mesorhizobium loti MAFF303099, complete genometransposase5e-60232
NC_010717:1343000:1346543134654313479251383Xanthomonas oryzae pv. oryzae PXO99A, complete genomeISXo8 transposase5e-60232
NC_007705:755948:7684327684327697511320Xanthomonas oryzae pv. oryzae MAFF 311018, complete genomeISXo8 transposase7e-60231
NC_017267:4232771:4244089424408942454711383Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completeISXo88e-60231
NC_010717:1551000:1578937157893715803191383Xanthomonas oryzae pv. oryzae PXO99A, complete genomeISXo8 transposase1e-59231
NC_010717:1343000:1343429134342913448111383Xanthomonas oryzae pv. oryzae PXO99A, complete genomeISXo8 transposase2e-59230
NC_010717:1343000:1354207135420713555891383Xanthomonas oryzae pv. oryzae PXO99A, complete genomeISXo8 transposase2e-59230
NC_017267:3982619:3995233399523339966751443Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completeISXo83e-59229
NC_010717:1469911:1484258148425814856401383Xanthomonas oryzae pv. oryzae PXO99A, complete genomeISXo8 transposase5e-59228
NC_010717:4626178:4634463463446346358451383Xanthomonas oryzae pv. oryzae PXO99A, complete genomeISXo8 transposase5e-59228
NC_006834:1602994:1619550161955016209321383Xanthomonas oryzae pv. oryzae KACC10331, complete genomeputative ISXo8 transposase1e-58227
NC_007705:1583373:1601721160172116030401320Xanthomonas oryzae pv. oryzae MAFF 311018, complete genomeISXo8 transposase2e-58227
NC_007705:1583373:1586809158680915881281320Xanthomonas oryzae pv. oryzae MAFF 311018, complete genomeISXo8 transposase4e-57222
NC_021150:1627347:1650587165058716519481362Azotobacter vinelandii CA6, complete genomeISRSO17-transposase protein2e-56220
NC_003155:320979:3379113379113391851275Streptomyces avermitilis MA-4680, complete genomeIS4 family transposase2e-53210
NC_003155:365500:3768833768833781571275Streptomyces avermitilis MA-4680, complete genomeIS4 family transposase2e-53210
NC_003155:4592000:4605720460572046070841365Streptomyces avermitilis MA-4680, complete genomeIS4 family transposase9e-52204
NC_006834:1602994:1603225160322516042951071Xanthomonas oryzae pv. oryzae KACC10331, complete genome2e-47190
NC_008095:4189082:4218073421807342192781206Myxococcus xanthus DK 1622, complete genometransposase, IS4 family1e-47190
NC_008095:4189082:4196042419604241972471206Myxococcus xanthus DK 1622, complete genometransposase, IS4 family1e-47190
NC_010717:1469911:1471833147183314728761044Xanthomonas oryzae pv. oryzae PXO99A, complete genomeISXo8 transposase2e-47189
NC_014032:249570:2669792669792684421464Salinibacter ruber M8 chromosome, complete genometransposase6e-45182
NC_013235:1761539:1777446177744617786841239Nakamurella multipartita DSM 44233, complete genometransposase IS4 family protein1e-44181
NC_017093:8518961:8533017853301785342641248Actinoplanes missouriensis 431, complete genomeputative transposase5e-44179
NC_012030:345837:3722553722553736581404Halorubrum lacusprofundi ATCC 49239 plasmid pHLAC01, completetransposase7e-40165
NC_009921:3854969:3876749387674938779211173Frankia sp. EAN1pec, complete genometransposase IS4 family protein2e-38160
NC_018012:4221612:4230525423052542318981374Thiocystis violascens DSM 198 chromosome, complete genometransposase family protein8e-38158
NC_018012:1326553:1344375134437513457811407Thiocystis violascens DSM 198 chromosome, complete genometransposase family protein8e-38158
NC_018012:1789028:1811212181121218126181407Thiocystis violascens DSM 198 chromosome, complete genometransposase family protein8e-38158
NC_018012:3300000:3310515331051533119211407Thiocystis violascens DSM 198 chromosome, complete genometransposase family protein8e-38158
NC_018012:3401854:3412764341276434141701407Thiocystis violascens DSM 198 chromosome, complete genometransposase family protein8e-38158
NC_014623:2962330:2997609299760929986971089Stigmatella aurantiaca DW4/3-1 chromosome, complete genometransposase6e-38158
NC_016582:1639375:1650687165068716518201134Streptomyces bingchenggensis BCW-1 chromosome, complete genomeIS4 family transposase4e-37155
NC_019892:2684793:2693170269317026945611392Singulisphaera acidiphila DSM 18658 chromosome, complete genometransposase family protein7e-36152
NC_019892:376000:3766143766143780051392Singulisphaera acidiphila DSM 18658 chromosome, complete genometransposase family protein7e-36152
NC_009921:3666898:3698724369872436999801257Frankia sp. EAN1pec, complete genometransposase IS4 family protein6e-36152
NC_009921:5531972:5532347553234755335311185Frankia sp. EAN1pec, complete genometransposase IS4 family protein8e-36151
NC_012987:32296:4895548955503131359Methylobacterium extorquens DM4 plasmid p1METDI, complete sequencetransposase of ISMdi28, IS701 family3e-35149
NC_007355:3153386:3166635316663531678251191Methanosarcina barkeri str. fusaro chromosome 1, complete sequencetransposase5e-35149
NC_008343:2020785:2020785202078520219991215Granulibacter bethesdensis CGDNIH1, complete genometransposase7e-35148
NC_011758:247666:2476662476662489191254Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completetransposase3e-34146
NC_012988:2541941:2560108256010825612111104Methylobacterium extorquens DM4, complete genometransposase of IS1357, IS701 family2e-33143
NC_002678:4859111:4875016487501648762301215Mesorhizobium loti MAFF303099, complete genometransposase1e-32141
NC_008268:1748635:1753980175398017551101131Rhodococcus sp. RHA1, complete genomeprobable transposase8e-33141
NC_010511:7553703:7557845755784575590531209Methylobacterium sp. 4-46 chromosome, complete genometransposase1e-31137
NC_021150:3667176:3681872368187236830771206Azotobacter vinelandii CA6, complete genometransposase3e-31136
NC_012560:3667177:3681873368187336830781206Azotobacter vinelandii DJ, complete genomeFOG transposase3e-31136
NC_013855:56344:6070460704619961293Azospirillum sp. B510 plasmid pAB510a, complete sequencetransposase7e-31135
NC_013854:1277106:1282320128232012836121293Azospirillum sp. B510, complete genometransposase8e-31135
NC_018524:2246225:2256521225652122576691149Nocardiopsis alba ATCC BAA-2165 chromosome, complete genometransposase DDE domain protein9e-31135
NC_015312:6717973:6721226672122667224551230Pseudonocardia dioxanivorans CB1190 chromosome, complete genometransposase1e-30134
NC_010125:2813653:2818415281841528196651251Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transposase4e-30132
NC_016109:4645905:4662361466236146635511191Kitasatospora setae KM-6054, complete genomeputative transposase1e-29131
NC_011365:502620:5119225119225131721251Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genometransposase IS7011e-29131
NC_011365:2996488:3004542300454230057921251Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genometransposase IS7011e-29131
NC_011365:1865687:1909799190979919110491251Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genometransposase IS7011e-29131
NC_017030:8667935:8675733867573386769561224Corallococcus coralloides DSM 2259 chromosome, complete genomeIS4 family transposase2e-29130
NC_015957:7408466:744474474447447445733990Streptomyces violaceusniger Tu 4113 chromosome, complete genometransposase3e-29130
NC_009921:3384116:3391103339110333924911389Frankia sp. EAN1pec, complete genomeFOG: Transposase-like protein5e-29129
NC_010717:2360000:238243823824382383430993Xanthomonas oryzae pv. oryzae PXO99A, complete genomeISXo88e-29128
NC_016027:2047954:2080655208065520819051251Gluconacetobacter xylinus NBRC 3288, complete genometransposase7e-29128
NC_016027:2047954:2077703207770320789531251Gluconacetobacter xylinus NBRC 3288, complete genometransposase7e-29128
NC_016027:1357659:1369338136933813705881251Gluconacetobacter xylinus NBRC 3288, complete genometransposase7e-29128
NC_016027:1357659:1395688139568813969381251Gluconacetobacter xylinus NBRC 3288, complete genometransposase7e-29128
NC_013211:163390:1749961749961762461251Acetobacter pasteurianus IFO 3283-01 plasmid pAPA01-020, completetransposase7e-29128
NC_017105:163390:1749961749961762461251Acetobacter pasteurianus IFO 3283-01-42C plasmid pAPA42C_020,transposase7e-29128
NC_017113:163390:1749961749961762461251Acetobacter pasteurianus IFO 3283-12 plasmid pAPA12-020, completetransposase7e-29128
NC_017118:163390:1749961749961762461251Acetobacter pasteurianus IFO 3283-03 plasmid pAPA03-020, completetransposase7e-29128
NC_017122:163390:1749961749961762461251Acetobacter pasteurianus IFO 3283-07 plasmid pAPA07-020, completetransposase7e-29128
NC_017126:163390:1749961749961762461251Acetobacter pasteurianus IFO 3283-22 plasmid pAPA22-020, completetransposase7e-29128
NC_017131:163390:1749961749961762461251Acetobacter pasteurianus IFO 3283-26 plasmid pAPA26-020, completetransposase7e-29128
NC_017149:163390:1749961749961762461251Acetobacter pasteurianus IFO 3283-32 plasmid pAPA32-020, completetransposase7e-29128
NC_015434:2375439:2386848238684823879991152Verrucosispora maris AB-18-032 chromosome, complete genometransposase IS4 family protein1e-27124
NC_006834:139500:148448148448149245798Xanthomonas oryzae pv. oryzae KACC10331, complete genomeputative ISXo8 transposase2e-27124
NC_019673:2051363:208413420841342084946813Saccharothrix espanaensis DSM 44229 complete genomeTransposase, IS4 family5e-27122
NC_013235:4975947:4990976499097649921871212Nakamurella multipartita DSM 44233, complete genometransposase IS4 family protein3e-26120
NC_014391:4644500:4655844465584446571421299Micromonospora aurantiaca ATCC 27029 chromosome, complete genometransposase3e-25117
NC_014391:277555:2916822916822929801299Micromonospora aurantiaca ATCC 27029 chromosome, complete genometransposase3e-25117
NC_007777:1296000:1301636130163613028081173Frankia sp. CcI3, complete genometransposase, IS45e-24112
NC_015388:2211828:222195422219542222576623Desulfobacca acetoxidans DSM 11109 chromosome, complete genome2e-23110
NC_009921:3419978:3419978341997834211471170Frankia sp. EAN1pec, complete genomeFOG: Transposase-like protein1e-22107
NC_010717:1551000:159040015904001590993594Xanthomonas oryzae pv. oryzae PXO99A, complete genomeISXo8 transposase4e-21102
NC_014623:7482229:752195075219507522597648Stigmatella aurantiaca DW4/3-1 chromosome, complete genometransposase4e-2099.8
NC_007796:1731500:1755452175545217564991048Methanospirillum hungatei JF-1, complete genome9e-1995.1
NC_010572:8352462:8376636837663683780601425Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative transposase3e-1790.1
NC_015957:7301546:730745673074567308298843Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-1687.4
NC_017186:6395435:639921863992186399649432Amycolatopsis mediterranei S699 chromosome, complete genometransposase3e-1583.6
NC_014318:6395392:639917563991756399606432Amycolatopsis mediterranei U32 chromosome, complete genometransposase remnant3e-1583.6
NC_016111:6222461:6238220623822062394071188Streptomyces cattleya NRRL 8057, complete genomeTylR regulatory protein-like protein3e-1583.6
NC_012560:4201969:421954342195434220148606Azotobacter vinelandii DJ, complete genometransposase4e-1582.8
NC_021150:4201965:421953942195394220144606Azotobacter vinelandii CA6, complete genometransposase4e-1582.8
NC_019892:5542478:554817155481715548977807Singulisphaera acidiphila DSM 18658 chromosome, complete genome7e-1582.4
NC_017030:5874824:589070858907085891256549Corallococcus coralloides DSM 2259 chromosome, complete genometransposase5e-1479.3
NC_016109:116995:1212311212311224301200Kitasatospora setae KM-6054, complete genomeputative transposase9e-1478.6
NC_011000:1216430:124138312413831241745363Burkholderia cenocepacia J2315 chromosome 1, complete sequence4e-1376.6
NC_015957:196000:200288200288200842555Streptomyces violaceusniger Tu 4113 chromosome, complete genome7e-1375.5
NC_009921:8147947:815532381553238156000678Frankia sp. EAN1pec, complete genometransposase6e-1272.4
NC_009953:4748147:475846247584624758896435Salinispora arenicola CNS-205 chromosome, complete genomehypothetical protein6e-1272.4
NC_019673:6362458:637238063723806372979600Saccharothrix espanaensis DSM 44229 complete genomeTransposase7e-1272
NC_009925:6323996:6336950633695063382601311Acaryochloris marina MBIC11017, complete genometransposase1e-1171.6
NC_009929:3923:1225012250135601311Acaryochloris marina MBIC11017 plasmid pREB4, complete sequencetransposase1e-1171.6
NC_009925:647752:6666456666456679551311Acaryochloris marina MBIC11017, complete genometransposase1e-1171.6
NC_009925:5737000:5743964574396457452741311Acaryochloris marina MBIC11017, complete genometransposase1e-1171.6
NC_008687:388262:411867411867412448582Paracoccus denitrificans PD1222 chromosome 2, complete sequencetransposase1e-1171.2
NC_017030:2263268:227144422714442272091648Corallococcus coralloides DSM 2259 chromosome, complete genometransposase3e-1170.5
NC_016582:1:149721497215466495Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein4e-1170.1
NC_007964:4157500:416860141686014168951351Nitrobacter hamburgensis X14, complete genome2e-1067.4
NC_011892:77975:876038760387887285Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completehypothetical protein2e-0963.9
NC_019673:6362458:637299563729956373432438Saccharothrix espanaensis DSM 44229 complete genomeTransposase5e-0962.8
NC_019892:7822000:787234278723427872974633Singulisphaera acidiphila DSM 18658 chromosome, complete genome3e-0860.1
NC_013161:1801904:1816721181672118178271107Cyanothece sp. PCC 8802, complete genomeFOG: transposase-like protein7e-0858.9
NC_013161:212941:2338632338632349691107Cyanothece sp. PCC 8802, complete genomeFOG: transposase-like protein7e-0858.9
NC_015957:196000:206249206249206647399Streptomyces violaceusniger Tu 4113 chromosome, complete genometransposase9e-0858.5
NC_010717:3933485:393822239382223938797576Xanthomonas oryzae pv. oryzae PXO99A, complete genomeISXo8 transposase2e-0757.4
NC_010125:763141:7716387716387728831246Gluconacetobacter diazotrophicus PAl 5, complete genome2e-0654.3
NC_017030:5874824:589003758900375890711675Corallococcus coralloides DSM 2259 chromosome, complete genometransposase2e-0654.3
NC_016582:1:143321433214853522Streptomyces bingchenggensis BCW-1 chromosome, complete genometransposase2e-0653.9
NC_009142:2480608:252189325218932522189297Saccharopolyspora erythraea NRRL 2338, complete genometransposase5e-0652.8