Pre_GI: BLASTP Hits

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Query: NC_017249:8358438:8370204 Bradyrhizobium japonicum USDA 6, complete genome

Start: 8370204, End: 8371151, Length: 948

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004463:1872537:1883214188321418842781065Bradyrhizobium japonicum USDA 110, complete genomeRSalpha putative transposase0654
NC_004463:2059500:2066222206622220672861065Bradyrhizobium japonicum USDA 110, complete genomeRSalpha putative transposase0654
NC_017249:908500:920362920362921309948Bradyrhizobium japonicum USDA 6, complete genometransposase0653
NC_017249:8137586:816001481600148160961948Bradyrhizobium japonicum USDA 6, complete genometransposase0653
NC_004463:1898648:1904949190494919060131065Bradyrhizobium japonicum USDA 110, complete genomeRSalpha putative transposase0648
NC_004463:1898648:1962417196241719634811065Bradyrhizobium japonicum USDA 110, complete genomeputative transposase0648
NC_017249:8283701:829388982938898294836948Bradyrhizobium japonicum USDA 6, complete genometransposase0648
NC_010170:3944228:3945315394531539463821068Bordetella petrii, complete genomeputative transposase3e-91335
NC_014836:497350:5037095037095047761068Desulfurispirillum indicum S5 chromosome, complete genomeputative transposase2e-86319
NC_014836:497350:5052555052555063221068Desulfurispirillum indicum S5 chromosome, complete genomeputative transposase2e-86319
NC_015572:1:4060140601416711071Methylomonas methanica MC09 chromosome, complete genomeputative transposase7e-76284
NC_013757:3717500:3718592371859237197041113Geodermatophilus obscurus DSM 43160, complete genomeISMsm5, transposase2e-64246
NC_013441:5025444:5025444502544450265171074Gordonia bronchialis DSM 43247, complete genomeISRSO5-transposase protein2e-62239
NC_007517:2241104:2282539228253922835791041Geobacter metallireducens GS-15, complete genomeputative transposase4e-61234
NC_016111:5515462:5522640552264055237281089Streptomyces cattleya NRRL 8057, complete genometransposase9e-60230
NC_016111:4003290:4012859401285940139471089Streptomyces cattleya NRRL 8057, complete genometransposase9e-60230
NC_016111:3308310:3330282333028233313701089Streptomyces cattleya NRRL 8057, complete genometransposase9e-60230
NC_010511:6067000:6132310613231061334311122Methylobacterium sp. 4-46 chromosome, complete genomeputative transposase3e-59229
NC_016111:3308310:3329151332915133302391089Streptomyces cattleya NRRL 8057, complete genometransposase3e-59228
NC_009142:5425763:5433158543315854342521095Saccharopolyspora erythraea NRRL 2338, complete genomeputative transposase2e-58226
NC_007964:2762000:2769198276919827702921095Nitrobacter hamburgensis X14, complete genometISRso5; ISRSO5-transposase protein1e-58226
NC_009255:1890112:1908471190847119095411071Burkholderia vietnamiensis G4 chromosome 2, complete sequenceputative transposase3e-58225
NC_008269:577111:5771115771115781931083Rhodococcus sp. RHA1 plasmid pRHL1, complete sequencetransposase8e-58224
NC_012791:2386000:2403297240329724043881092Variovorax paradoxus S110 chromosome 1, complete genomeIntegrase catalytic region4e-57221
NC_009953:3509229:3531373353137335324611089Salinispora arenicola CNS-205 chromosome, complete genomeputative transposase6e-57221
NC_007951:1042291:1047582104758210486521071Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative transposase1e-56220
NC_015656:1618329:1628835162883516299231089Frankia symbiont of Datisca glomerata chromosome, complete genomeputative transposase2e-56219
NC_015656:2484749:2507008250700825080961089Frankia symbiont of Datisca glomerata chromosome, complete genomeputative transposase2e-56219
NC_015656:632960:6426266426266437141089Frankia symbiont of Datisca glomerata chromosome, complete genomeputative transposase2e-56219
NC_015656:4850833:4854067485406748551551089Frankia symbiont of Datisca glomerata chromosome, complete genomeputative transposase2e-56219
NC_015656:1653450:1668188166818816692761089Frankia symbiont of Datisca glomerata chromosome, complete genomeputative transposase2e-56219
NC_008782:2781229:2781490278149027825691080Acidovorax sp. JS42, complete genomeIntegrase, catalytic region4e-56218
NC_015724:129331:1308041308041319071104Cupriavidus necator N-1 plasmid BB2p, complete sequencetransposase2e-55216
NC_009921:8648994:8662007866200786630951089Frankia sp. EAN1pec, complete genomeputative transposase6e-55214
NC_009921:3473854:3481826348182634829141089Frankia sp. EAN1pec, complete genomeputative transposase6e-55214
NC_009921:3255833:3263570326357032647391170Frankia sp. EAN1pec, complete genomeputative transposase6e-55214
NC_015656:105840:1098501098501109381089Frankia symbiont of Datisca glomerata chromosome, complete genomeputative transposase5e-55214
NC_015656:132633:1537311537311548191089Frankia symbiont of Datisca glomerata chromosome, complete genomeputative transposase5e-55214
NC_009921:3384116:3392563339256333936541092Frankia sp. EAN1pec, complete genomeIntegrase catalytic region4e-54212
NC_009921:3473854:3480622348062234817131092Frankia sp. EAN1pec, complete genomeIntegrase catalytic region3e-54212
NC_009921:8648994:8660847866084786619381092Frankia sp. EAN1pec, complete genomeIntegrase catalytic region3e-54212
NC_009921:2605721:2613266261326626143571092Frankia sp. EAN1pec, complete genomeIntegrase catalytic region3e-54212
NC_010087:376918:4319304319304330151086Burkholderia multivorans ATCC 17616 chromosome 3, completetransposase7e-54211
NC_010801:550270:5557985557985568831086Burkholderia multivorans ATCC 17616 chromosome 3, completeISBmu8 transposase7e-54211
NC_010801:481601:4918434918434929281086Burkholderia multivorans ATCC 17616 chromosome 3, completeISBmu8 transposase7e-54211
NC_015422:3513689:3547993354799335491201128Alicycliphilus denitrificans K601 chromosome, complete genomeISRSO5-transposase protein6e-54211
NC_008554:4586543:4604255460425546053431089Syntrophobacter fumaroxidans MPOB, complete genomeputative transposase1e-53210
NC_017904:2379387:238034723803472381252906Mycobacterium sp. MOTT36Y chromosome, complete genomeISMsm2, transposase1e-53210
NC_010623:72500:1035361035361046271092Burkholderia phymatum STM815 chromosome 2, complete sequenceISRSO5-transposase protein1e-52207
NC_008786:2850736:2851717285171728527781062Verminephrobacter eiseniae EF01-2, complete genomeIntegrase, catalytic region2e-52206
NC_009921:4035225:4053138405313840542321095Frankia sp. EAN1pec, complete genomeputative transposase1e-52206
NC_013929:3953046:3960222396022239612831062Streptomyces scabiei 87.22 chromosome, complete genometransposase3e-52205
NC_013929:6663889:6664724666472466658151092Streptomyces scabiei 87.22 chromosome, complete genometransposase3e-52205
NC_011982:130199:1454811454811465811101Agrobacterium vitis S4 plasmid pTiS4, complete sequencetransposase5e-52204
NC_008786:2809985:2814159281415928151901032Verminephrobacter eiseniae EF01-2, complete genomeIntegrase, catalytic region8e-52204
NC_010625:229478:2434062434062444761071Burkholderia phymatum STM815 plasmid pBPHY01, complete sequenceintegrase, catalytic region2e-50199
NC_009620:1307932:1307932130793213090201089Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequenceferuloyl esterase2e-50199
NC_009342:135500:1679201679201690111092Corynebacterium glutamicum R chromosome, complete genomehypothetical protein3e-50198
NC_004463:18497:2197221972230811110Bradyrhizobium japonicum USDA 110, complete genomeputative transposase1e-49197
NC_003295:112778:1279031279031289941092Ralstonia solanacearum GMI1000, complete genomeISRSO5-TRANSPOSASE PROTEIN2e-49196
NC_003296:262118:2697812697812708721092Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completeISRSO5-TRANSPOSASE PROTEIN2e-49196
NC_003295:112778:1179921179921190831092Ralstonia solanacearum GMI1000, complete genomeISRSO5-TRANSPOSASE PROTEIN2e-49196
NC_017249:18493:221332213323077945Bradyrhizobium japonicum USDA 6, complete genometransposase3e-48192
NC_015572:4063150:4084032408403240850991068Methylomonas methanica MC09 chromosome, complete genomeintegrase catalytic subunit4e-48191
NC_014355:2775979:2791725279172527927771053Candidatus Nitrospira defluvii, complete genomeputative transposase7e-48191
NC_005773:4899252:4934372493437249354451074Pseudomonas syringae pv. phaseolicola 1448A, complete genomeISPsy25, transposase7e-48191
NC_008554:956003:9638469638469648861041Syntrophobacter fumaroxidans MPOB, complete genomeferuloyl esterase9e-48190
NC_009255:1890112:189511218951121896026915Burkholderia vietnamiensis G4 chromosome 2, complete sequenceputative transposase4e-47188
NC_011982:130199:1402221402221413211100Agrobacterium vitis S4 plasmid pTiS4, complete sequence2e-46186
NC_021177:7815791:782802778280277828764738Streptomyces fulvissimus DSM 40593, complete genomePutative transposase2e-45183
NC_008786:1553833:1563177156317715642321056Verminephrobacter eiseniae EF01-2, complete genomeputative transposase2e-42172
NC_016906:408720:430799430799431692894Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative transposase5e-42171
NC_015422:2858228:2899937289993729010671131Alicycliphilus denitrificans K601 chromosome, complete genomeputative transposase5e-40164
NC_015422:4508028:4508028450802845091581131Alicycliphilus denitrificans K601 chromosome, complete genomeputative transposase5e-40164
NC_011892:77975:9320393203942731071Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completeputative transposase6e-39161
NC_011982:130199:135413135413136204792Agrobacterium vitis S4 plasmid pTiS4, complete sequence1e-38160
NC_013595:5221330:522965252296525230521870Streptosporangium roseum DSM 43021, complete genome1e-36154
NC_008786:2850736:285317828531782854035858Verminephrobacter eiseniae EF01-2, complete genomeputative transposase1e-34147
NC_007777:2186000:2207079220707922082091131Frankia sp. CcI3, complete genomeputative IS630 family transposase2e-33143
NC_009921:3384116:3401958340195834031331176Frankia sp. EAN1pec, complete genomeputative transposase2e-33142
NC_003296:556836:562296562296562835540Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completeREMNANT OF ISRSO5-TRANSPOSASE PROTEIN2e-30133
NC_009921:5681677:569703456970345697882849Frankia sp. EAN1pec, complete genomeputative transposase2e-30133
NC_008786:2809985:281787428178742818458585Verminephrobacter eiseniae EF01-2, complete genomeputative transposase1e-30133
NC_009921:4035225:404906740490674049702636Frankia sp. EAN1pec, complete genomeputative transposase2e-28126
NC_015312:5240653:5245208524520852463111104Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeIntegrase catalytic region1e-27124
NC_014098:2225174:2233762223376222349071146Bacillus tusciae DSM 2912 chromosome, complete genomehypothetical protein2e-27122
NC_008554:956003:972935972935973336402Syntrophobacter fumaroxidans MPOB, complete genomeputative transposase4e-27122
NC_006361:3047788:305867530586753059424750Nocardia farcinica IFM 10152, complete genomeputative transposase3e-26119
NC_007489:42500:495504955050038489Rhodobacter sphaeroides 2.4.1 plasmid C, complete sequence3e-26119
NC_019673:8161242:8181272818127281823301059Saccharothrix espanaensis DSM 44229 complete genomeTransposase, IS630 family5e-26118
NC_016027:1851737:188045018804501880983534Gluconacetobacter xylinus NBRC 3288, complete genometransposase1e-25117
NC_013216:4097056:4099180409918041003131134Desulfotomaculum acetoxidans DSM 771, complete genomehypothetical protein3e-24112
NC_013216:1442044:1468312146831214694451134Desulfotomaculum acetoxidans DSM 771, complete genomehypothetical protein3e-24112
NC_009485:1487485:1495408149540814965801173Bradyrhizobium sp. BTAi1 chromosome, complete genometransposase2e-21103
NC_016906:1458158:146980714698071470394588Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative transposase6e-21101
NC_016027:54305:786597865979180522Gluconacetobacter xylinus NBRC 3288, complete genometransposase6e-21101
NC_015656:1947810:195399819539981954762765Frankia symbiont of Datisca glomerata chromosome, complete genomeputative transposase2e-2099.8
NC_013194:1631134:1649249164924916503881140Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completehypothetical protein7e-2098.2
NC_015957:7301546:730834073083407308813474Streptomyces violaceusniger Tu 4113 chromosome, complete genome9e-2097.8
NC_010572:1:1950019500206331134Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative transposase3e-1995.9
NC_010572:8493946:8525297852529785264301134Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative transposase3e-1995.9
NC_010524:824145:836012836012836683672Leptothrix cholodnii SP-6, complete genometransposase4e-1892
NC_014623:3029853:305533030553303056112783Stigmatella aurantiaca DW4/3-1 chromosome, complete genometransposase6e-1891.7
NC_010172:4064087:408429440842944084764471Methylobacterium extorquens PA1, complete genomehypothetical protein5e-1788.6
NC_007951:1042291:104664910466491047188540Burkholderia xenovorans LB400 chromosome 1, complete sequence2e-1686.7
NC_008554:956003:972392972392972700309Syntrophobacter fumaroxidans MPOB, complete genomehypothetical protein4e-1685.5
NC_015957:7408466:744860574486057449471867Streptomyces violaceusniger Tu 4113 chromosome, complete genomeputative transposase1e-1584.3
NC_015416:2785514:279739527973952798000606Methanosaeta concilii GP-6 chromosome, complete genometransposase6e-1582
NC_003552:1234712:123726212372621237921660Methanosarcina acetivorans C2A, complete genome1e-1480.9
NC_003155:320979:336652336652337179528Streptomyces avermitilis MA-4680, complete genomeIS630 family transposase2e-1480.1
NC_008553:1038344:105185810518581052481624Methanosaeta thermophila PT, complete genometransposase2e-1376.6
NC_015635:3860570:388549938854993885855357Microlunatus phosphovorus NM-1, complete genomehypothetical protein8e-1374.7
NC_013595:8162181:8179090817909081801241035Streptosporangium roseum DSM 43021, complete genomehypothetical protein4e-1272.4
NC_016027:54305:791977919779562366Gluconacetobacter xylinus NBRC 3288, complete genometransposase4e-1272.4
NC_015416:1832759:183915418391541839768615Methanosaeta concilii GP-6 chromosome, complete genometransposase3e-1169.7
NC_008536:9538891:9573048957304895741691122Solibacter usitatus Ellin6076, complete genomehypothetical protein6e-1168.6
NC_003901:2906493:292085429208542921513660Methanosarcina mazei Go1, complete genometransposase8e-1168.2
NC_015675:6464000:646897064689706469923954Mesorhizobium opportunistum WSM2075 chromosome, complete genome9e-1167.8
NC_003296:556836:564871564871565455585Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completeREMNANT OF ISRSO5 TRANSPOSASE PROTEIN1e-1067
NC_015635:2001539:201470720147072015051345Microlunatus phosphovorus NM-1, complete genomehypothetical protein2e-1066.6
NC_014623:6809000:681692568169256817668744Stigmatella aurantiaca DW4/3-1 chromosome, complete genometransposase4e-1065.9
NC_014254:132957:134105134105134698594Methanohalobium evestigatum Z-7303 plasmid pMETEV01, completetransposase7e-1065.1
NC_020126:8512908:852167485216748522066393Myxococcus stipitatus DSM 14675, complete genometransposase6e-1065.1
NC_014253:142026:163556163556164149594Methanohalobium evestigatum Z-7303 chromosome, complete genometransposase6e-1065.1
NC_005126:5188976:5188976518897651899891014Photorhabdus luminescens subsp. laumondii TTO1, complete genomeTransposase, IS630 family8e-1064.7
NC_016943:3270308:331252233125223313142621Blastococcus saxobsidens DD2, complete genomeputative transposase9e-1064.7
NC_019892:9280367:928552892855289286325798Singulisphaera acidiphila DSM 18658 chromosome, complete genomehypothetical protein1e-0963.9
NC_007489:42500:492574925749529273Rhodobacter sphaeroides 2.4.1 plasmid C, complete sequence2e-0963.5
NC_007759:1028977:105511710551171055737621Syntrophus aciditrophicus SB, complete genometransposase and inactivated derivatives2e-0963.2
NC_011060:1538375:154562215456221546245624Pelodictyon phaeoclathratiforme BU-1, complete genometransposase2e-0963.2
NC_011894:983572:100650810065081007044537Methylobacterium nodulans ORS 2060, complete genomehypothetical protein3e-0962.8
NC_013595:9994000:9994889999488999960101122Streptosporangium roseum DSM 43021, complete genomehypothetical protein3e-0962.8
NC_020210:1275031:1342816134281613438591044Geobacillus sp. GHH01, complete genometransposase4e-0962.4
NC_009485:1604942:164366516436651644285621Bradyrhizobium sp. BTAi1 chromosome, complete genometransposase4e-0962.4
NC_005125:4062025:406516940651694065420252Gloeobacter violaceus PCC 7421, complete genomeputative transposase5e-0962
NC_011060:514874:528575528575529138564Pelodictyon phaeoclathratiforme BU-1, complete genometransposase1e-0860.8
NC_009921:3473854:348477834847783485440663Frankia sp. EAN1pec, complete genomehypothetical protein1e-0860.5
NC_013595:7302888:730714773071477307701555Streptosporangium roseum DSM 43021, complete genomehypothetical protein2e-0860.1
NC_015656:1618329:162811016281101628718609Frankia symbiont of Datisca glomerata chromosome, complete genomehypothetical protein2e-0859.7
NC_016861:22256:3292232922339591038Salmonella enterica subsp. enterica serovar Typhimurium strputative integrase4e-0859.3
NC_003277:22257:3292932929339661038Salmonella typhimurium LT2 plasmid pSLT, complete sequenceputative integrase protein4e-0859.3
NC_008278:5855401:5883223588322358842301008Frankia alni ACN14a, complete genomeTransposase5e-0858.9
NC_013595:3541012:3550637355063735517671131Streptosporangium roseum DSM 43021, complete genomehypothetical protein5e-0858.5
NC_003888:8594500:861249886124988613085588Streptomyces coelicolor A3(2), complete genomehypothetical protein1e-0757.8
NC_016111:3052494:3078576307857630796971122Streptomyces cattleya NRRL 8057, complete genometransposase1e-0757.8
NC_016906:408720:431689431689431895207Gordonia polyisoprenivorans VH2 chromosome, complete genomehypothetical protein2e-0756.6
NC_007951:1042291:104722510472251047428204Burkholderia xenovorans LB400 chromosome 1, complete sequence2e-0756.6
NC_008639:2968000:301191030119103012470561Chlorobium phaeobacteroides DSM 266, complete genometransposase4e-0755.8
NC_016822:3485631:3497894349789434989251032Shigella sonnei 53G, complete genomeIS630 orf4e-0755.8
NC_007384:2007467:2014725201472520157561032Shigella sonnei Ss046, complete genomeIS630 ORF5e-0755.5
NC_007384:1737885:1748054174805417490851032Shigella sonnei Ss046, complete genomeIS630 ORF5e-0755.5
NC_007384:307013:3185883185883196191032Shigella sonnei Ss046, complete genomeIS630 ORF5e-0755.5
NC_007384:3383983:3383983338398333850141032Shigella sonnei Ss046, complete genomeIS630 ORF5e-0755.5
NC_016822:1818897:1827376182737618284071032Shigella sonnei 53G, complete genomeIS630 orf5e-0755.5
NC_016822:3282654:3298701329870132997321032Shigella sonnei 53G, complete genomeIS630 orf5e-0755.5
NC_007385:157516:1607221607221617531032Shigella sonnei Ss046 plasmid pSS_046, complete sequenceIS630 ORF5e-0755.5
NC_020210:1275031:130365813036581304146489Geobacillus sp. GHH01, complete genometransposase1e-0653.9
NC_016593:3249767:326731032673103267798489Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein1e-0653.9
NC_012793:1718000:1732449173244917335161068Geobacillus sp. WCH70, complete genomeIntegrase catalytic region2e-0653.5
NC_017080:1335407:134165113416511342322672Phycisphaera mikurensis NBRC 102666, complete genomeputative transposase for insertion sequence element2e-0653.1
NC_011059:65414:785297852979089561Prosthecochloris aestuarii DSM 271, complete genometransposase4e-0652.4
NC_004851:191709:195760195760196716957Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceIS630 ORF4e-0652.4
NC_017319:192482:195688195688196644957Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceIS630 ORF5e-0652.4