Pre_GI: BLASTP Hits

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Query: NC_017249:8358438:8364483 Bradyrhizobium japonicum USDA 6, complete genome

Start: 8364483, End: 8365574, Length: 1092

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004463:1872537:1888916188891618900071092Bradyrhizobium japonicum USDA 110, complete genomeuptake hydrogenase small subunit precursor homolog0679
NC_007973:1411714:1414328141432814154221095Ralstonia metallidurans CH34 chromosome 1, complete sequencehydrogenase (NiFe) small subunit (hydA)6e-141500
NC_009720:2424975:2433685243368524347971113Xanthobacter autotrophicus Py2, complete genomehydrogenase (NiFe) small subunit HydA4e-139494
NC_013851:2610847:2629413262941326305101098Allochromatium vinosum DSM 180 chromosome, complete genomehydrogenase (NiFe) small subunit HydA2e-136485
NC_008687:256692:2831972831972842821086Paracoccus denitrificans PD1222 chromosome 2, complete sequencehydrogenase (NiFe) small subunit HydA2e-136485
NC_010067:1116148:1119281111928111203991119Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein9e-132470
NC_011745:1055354:1075360107536010764781119Escherichia coli ED1a chromosome, complete genomehydrogenase 1, small subunit8e-130463
NC_015761:1488807:1491306149130614924091104Salmonella bongori NCTC 12419, complete genomeuptake hydrogenase small subunit1e-129462
NC_016856:1621279:1623778162377816248811104Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative hydrogenase-1 small subunit9e-129460
NC_003197:1611302:1613801161380116149041104Salmonella typhimurium LT2, complete genomeputative hydrogenase-1 small subunit9e-129460
NC_011353:1195179:1216292121629212174101119Escherichia coli O157:H7 str. EC4115 chromosome, complete genomenickel-dependent hydrogenase 1, small subunit2e-128459
NC_003198:1463253:1480110148011014812131104Salmonella enterica subsp. enterica serovar Typhi str. CT18,uptake hydrogenase small subunit5e-128457
NC_010067:1414000:143387114338711434863993Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-119428
NC_015557:30622:4921349213502831071Hydrogenobaculum sp. 3684 chromosome, complete genomehydrogenase (NiFe) small subunit HydA3e-115415
NC_011059:921690:9356989356989367921095Prosthecochloris aestuarii DSM 271, complete genomehydrogenase (NiFe) small subunit HydA4e-107388
NC_011060:1947795:1951538195153819526261089Pelodictyon phaeoclathratiforme BU-1, complete genomehydrogenase (NiFe) small subunit HydA2e-105382
NC_018515:3411276:3416846341684634179461101Desulfosporosinus meridiei DSM 13257 chromosome, complete genomehydrogenase (NiFe) small subunit HydA2e-100365
NC_015557:1333158:133315813331581334120963Hydrogenobaculum sp. 3684 chromosome, complete genomehydrogenase (NiFe) small subunit HydA4e-87321
NC_020411:1333352:133335213333521334314963Hydrogenobaculum sp. HO, complete genomehydrogenase (NiFe) small subunit HydA4e-86318
NC_019940:3660754:3664470366447036655671098Thioflavicoccus mobilis 8321 chromosome, complete genomehydrogenase (NiFe) small subunit HydA1e-70267
NC_014541:1165991:1194170119417011953181149Ferrimonas balearica DSM 9799 chromosome, complete genomehydrogenase (NiFe) small subunit HydA1e-69263
NC_009092:1989977:2017409201740920185451137Shewanella loihica PV-4, complete genomehydrogenase (NiFe) small subunit HydA4e-69261
NC_013943:2610902:2615995261599526171011107Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomehydrogenase (NiFe) small subunit HydA8e-69261
NC_013851:2317091:2337830233783023389331104Allochromatium vinosum DSM 180 chromosome, complete genomehydrogenase (NiFe) small subunit HydA2e-68259
NC_017192:1933106:1944229194422919454641236Arcobacter sp. L, complete genomeNi/Fe-hydrogenase small subunit2e-67256
NC_009921:4035225:4034026403402640352281203Frankia sp. EAN1pec, complete genomehydrogenase (NiFe) small subunit HydA6e-67254
NC_012483:3529895:3533668353366835348101143Acidobacterium capsulatum ATCC 51196, complete genomenickel-dependent hydrogenase, small subunit5e-65248
NC_014216:1061265:1072576107257610738321257Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomehydrogenase (NiFe) small subunit HydA4e-65248
NC_010278:1467146:1484733148473314858751143Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,hydrogenase 2 small subunit2e-64246
NC_011740:2986514:3006959300695930080771119Escherichia fergusonii ATCC 35469, complete genomehydrogenase 2, small subunit3e-60232
NC_014166:33138:3444134441368642424Arcobacter nitrofigilis DSM 7299 chromosome, complete genomehydrogenase (NiFe) small subunit HydA2e-55216
NC_018515:937994:9562149562149572901077Desulfosporosinus meridiei DSM 13257 chromosome, complete genomehydrogenase (NiFe) small subunit HydA8e-50197
NC_011830:2940500:2942816294281629439041089Desulfitobacterium hafniense DCB-2, complete genomehydrogenase (NiFe) small subunit HydA7e-49194
NC_015499:352934:3605103605103615801071Thermodesulfobium narugense DSM 14796 chromosome, complete genomehydrogenase (NiFe) small subunit HydA2e-42173
NC_021184:1257722:126379612637961264764969Desulfotomaculum gibsoniae DSM 7213, complete genomehydrogenase (NiFe) small subunit HydA3e-41169
NC_021182:1761789:176965717696571770553897Clostridium pasteurianum BC1, complete genomehydrogenase (NiFe) small subunit HydA2e-39163
NC_013173:2261396:226413822641382265085948Desulfomicrobium baculatum DSM 4028, complete genomehydrogenase (NiFe) small subunit HydA4e-39162
NC_021182:1983456:198973819897381990619882Clostridium pasteurianum BC1, complete genomehydrogenase (NiFe) small subunit HydA1e-37157
NC_014314:1:2201022010230591050Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completehydrogenase (NiFe) small subunit HydA3e-36152
NC_021182:2013500:202827420282742029167894Clostridium pasteurianum BC1, complete genomehydrogenase (NiFe) small subunit HydA1e-35150
NC_014365:1094516:111291211129121113841930Desulfarculus baarsii DSM 2075 chromosome, complete genomehydrogenase (NiFe) small subunit HydA7e-35148
NC_021182:1983456:199100819910081991901894Clostridium pasteurianum BC1, complete genomehydrogenase (NiFe) small subunit HydA2e-34147
NC_003901:2533000:2571365257136525725251161Methanosarcina mazei Go1, complete genomeF420-nonreducing hydrogenase II precursor1e-31137
NC_013741:838243:8451968451968462541059Archaeoglobus profundus DSM 5631, complete genomehydrogenase (NiFe) small subunit HydA3e-28126
NC_014216:608740:610233610233611150918Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomehydrogenase (NiFe) small subunit HydA5e-26119
NC_003272:784437:795536795536796498963Nostoc sp. PCC 7120, complete genome[NiFe] uptake hydrogenase small subunit2e-20100
NC_007413:5742406:575191757519175752879963Anabaena variabilis ATCC 29413, complete genomeNADH ubiquinone oxidoreductase, 20 kDa subunit6e-2098.6
NC_015312:6717973:672773567277356728706972Pseudonocardia dioxanivorans CB1190 chromosome, complete genomecytochrome-c3 hydrogenase5e-1995.5
NC_017192:1933106:194708019470801947970891Arcobacter sp. L, complete genomeNi/Fe-dependent hydrogenase small subunit9e-1788.2
NC_008595:2687245:2716404271640427174591056Mycobacterium avium 104, complete genomeNADH ubiquinone oxidoreductase, 20 kda subunit5e-1685.9
NC_015931:71361:7220772207737121506Pyrolobus fumarii 1A, complete genomeNiFe hydrogenase3e-1169.7
NC_008340:2272692:2283325228332522843441020Alkalilimnicola ehrlichei MLHE-1, complete genomeNADH ubiquinone oxidoreductase, 20 kDa subunit4e-1169.3
NC_008687:256692:278284278284279273990Paracoccus denitrificans PD1222 chromosome 2, complete sequenceNADH ubiquinone oxidoreductase, 20 kDa subunit3e-0963.2