Pre_GI: BLASTP Hits

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Query: NC_017249:8358438:8359627 Bradyrhizobium japonicum USDA 6, complete genome

Start: 8359627, End: 8360178, Length: 552

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004463:1872537:189431218943121894863552Bradyrhizobium japonicum USDA 110, complete genomeHupH protein homolog3e-103373
NC_009720:2424975:243917024391702440024855Xanthobacter autotrophicus Py2, complete genomeHupH hydrogenase expression protein7e-32136
NC_008340:2272692:229540122954012296237837Alkalilimnicola ehrlichei MLHE-1, complete genomeHupH hydrogenase expression protein1e-27122
NC_010067:1414000:1428973142897314300341062Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein9e-22103
NC_011745:1055354:107997010799701080827858Escherichia coli ED1a chromosome, complete genomeprotein involved in nickel incorporation into hydrogenase-1 proteins2e-2099