Pre_GI: BLASTP Hits

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Query: NC_017249:7341428:7350855 Bradyrhizobium japonicum USDA 6, complete genome

Start: 7350855, End: 7351496, Length: 642

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002947:2157648:2177762217776221791981437Pseudomonas putida KT2440, complete genomehypothetical protein1e-67255
NC_015856:764651:7720667720667734961431Collimonas fungivorans Ter331 chromosome, complete genometransposase2e-67255
NC_009434:608765:6434746434746449041431Pseudomonas stutzeri A1501, complete genomehypothetical protein6e-67253
NC_012791:4736084:4748063474806347495111449Variovorax paradoxus S110 chromosome 1, complete genometransposase IS4 family protein6e-66250
NC_011000:2831183:2847120284712028484991380Burkholderia cenocepacia J2315 chromosome 1, complete sequence3e-65247
NC_016626:1699500:1734505173450517358721368Burkholderia sp. YI23 plasmid byi_1p, complete sequencetransposase domain-containing protein6e-65246
NC_008825:2889933:2916050291605029174951446Methylibium petroleiphilum PM1, complete genomehypothetical protein1e-64246
NC_020829:940692:9607179607179621531437Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein2e-64245
NC_002516:1474000:1481334148133414827581425Pseudomonas aeruginosa PAO1, complete genomehypothetical protein2e-63241
NC_015856:268034:2745272745272759661440Collimonas fungivorans Ter331 chromosome, complete genometransposase2e-63241
NC_016626:1781956:1791698179169817931281431Burkholderia sp. YI23 plasmid byi_1p, complete sequencetransposase domain-containing protein4e-63240
NC_009050:811358:8435018435018446731173Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequencetransposase, IS4 family protein6e-61233
NC_020911:1353896:135446013544601354984525Octadecabacter antarcticus 307, complete genome1e-56219
NC_010725:4035397:4071817407181740732531437Methylobacterium populi BJ001, complete genometransposase IS4 family protein3e-54211
NC_016626:1825845:1848313184831318496621350Burkholderia sp. YI23 plasmid byi_1p, complete sequencetransposase IS4 family protein7e-52203
NC_007492:3180480:3218775321877532201931419Pseudomonas fluorescens PfO-1, complete genomeTransposase, IS41e-43176
NC_007005:98488:1049511049511063691419Pseudomonas syringae pv. syringae B728a, complete genomeTransposase, IS43e-41168
NC_004578:3849835:3865785386578538668581074Pseudomonas syringae pv. tomato str. DC3000, complete genome6e-41167
NC_004578:1719849:1728650172865017301101461Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPsy6, transposase4e-41167
NC_004578:4204235:4217893421789342193531461Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPsy6, transposase1e-40166
NC_015321:4495394:4498481449848145000551575Fluviicola taffensis DSM 16823 chromosome, complete genometransposase IS4 family protein5e-40164
NC_015321:4287945:4301965430196543035391575Fluviicola taffensis DSM 16823 chromosome, complete genometransposase IS4 family protein5e-40164
NC_018866:1706000:171034917103491710915567Dehalobacter sp. DCA chromosome, complete genomeISPsy6, transposase7e-40163
NC_020156:3670500:367339936733993674313915Nonlabens dokdonensis DSW-6, complete genomeISCps6, transposase7e-39160
NC_020156:3670500:3680407368040736819631557Nonlabens dokdonensis DSW-6, complete genomeISCps6, transposase9e-39159
NC_020156:3050423:3061281306128130628371557Nonlabens dokdonensis DSW-6, complete genomeISCps6, transposase3e-38158
NC_009720:3377071:3377071337707133784921422Xanthobacter autotrophicus Py2, complete genometransposase IS4 family protein5e-38157
NC_020156:3050423:3058082305808230596381557Nonlabens dokdonensis DSW-6, complete genomeISCps6, transposase5e-38157
NC_020156:3670500:3670559367055936721151557Nonlabens dokdonensis DSW-6, complete genomeISCps6, transposase5e-38157
NC_020156:3670500:367659736765973677100504Nonlabens dokdonensis DSW-6, complete genomeISCps6, transposase2e-37155
NC_021182:4829000:4841785484178548432361452Clostridium pasteurianum BC1, complete genometransposase2e-37155
NC_004663:44647:677106771068333624Bacteroides thetaiotaomicron VPI-5482, complete genomehypothetical protein1e-32139
NC_020156:3050423:3054257305425730557501494Nonlabens dokdonensis DSW-6, complete genomeISCps6, transposase1e-32139
NC_016112:1330500:1345125134512513466271503Methylomicrobium alcaliphilum chromosome, complete genometransposase7e-32137
NC_019902:2306961:2308559230855923100611503Thioalkalivibrio nitratireducens DSM 14787, complete genomeISPsy6, transposase2e-30132
NC_010505:4396800:440247644024764402778303Methylobacterium radiotolerans JCM 2831, complete genome1e-29129
NC_009485:5171658:520904452090445209391348Bradyrhizobium sp. BTAi1 chromosome, complete genome8e-22103
NC_016048:308342:3146793146793159351257Oscillibacter valericigenes Sjm18-20, complete genomeputative transposase for insertion sequence element5e-1994.4
NC_016048:2907702:2989988298998829913161329Oscillibacter valericigenes Sjm18-20, complete genomeputative transposase for insertion sequence element5e-1994.4
NC_016048:375676:3824683824683837241257Oscillibacter valericigenes Sjm18-20, complete genomeputative transposase for insertion sequence element5e-1994.4
NC_009040:43791:488814888149420540Rhodobacter sphaeroides ATCC 17029 plasmid pRSPH01, completehypothetical protein1e-1893.2
NC_003552:1234712:1246905124690512483891485Methanosarcina acetivorans C2A, complete genometransposase2e-1892.8
NC_015731:169989:1842751842751856271353Nitrosomonas sp. Is79A3 chromosome, complete genometransposase IS4 family protein1e-1789.7
NC_011892:77975:8459584595859291335Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completetransposase IS4 family protein2e-1789
NC_011894:2747491:2759510275951027608441335Methylobacterium nodulans ORS 2060, complete genometransposase IS4 family protein2e-1789
NC_011894:7702000:7703584770358477049181335Methylobacterium nodulans ORS 2060, complete genometransposase IS4 family protein2e-1789
NC_011894:2125474:2127166212716621285001335Methylobacterium nodulans ORS 2060, complete genometransposase IS4 family protein2e-1789
NC_011894:7563668:7593489759348975948231335Methylobacterium nodulans ORS 2060, complete genometransposase IS4 family protein2e-1789
NC_011894:6888562:6893156689315668944901335Methylobacterium nodulans ORS 2060, complete genometransposase IS4 family protein2e-1789
NC_011887:72364:8861888618899521335Methylobacterium nodulans ORS 2060 plasmid pMNOD02, completetransposase IS4 family protein2e-1789
NC_003552:1234712:124960612496061250430825Methanosarcina acetivorans C2A, complete genometransposase2e-1788.6
NC_011894:3319856:3324019332401933253531335Methylobacterium nodulans ORS 2060, complete genometransposase IS4 family protein3e-1788.2
NC_003552:3479000:3493235349323534948301596Methanosarcina acetivorans C2A, complete genomehypothetical protein5e-1787.8
NC_014153:2077647:2082305208230520836601356Thiomonas intermedia K12 chromosome, complete genometransposase IS4 family protein7e-1787
NC_013223:1349000:1374030137403013753671338Desulfohalobium retbaense DSM 5692, complete genometransposase IS4 family protein8e-1787
NC_013223:724394:7494277494277539054479Desulfohalobium retbaense DSM 5692, complete genome1e-1686.7
NC_011365:2996488:3003025300302530043681344Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genometransposase IS1182 family protein2e-1685.5
NC_011365:1969198:1974888197488819762311344Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genometransposase IS1182 family protein2e-1685.5
NC_010125:3393368:3408953340895334102961344Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transposase2e-1685.5
NC_013223:724394:7500097500097513461338Desulfohalobium retbaense DSM 5692, complete genometransposase IS4 family protein3e-1685.1
NC_006177:2211458:2223057222305722244151359Symbiobacterium thermophilum IAM 14863, complete genometransposase2e-1582.4
NC_006177:3549467:3554328355432835556861359Symbiobacterium thermophilum IAM 14863, complete genometransposase2e-1582.4
NC_006177:2398482:244766624476662448160495Symbiobacterium thermophilum IAM 14863, complete genometransposase2e-1582
NC_006177:2883476:2900678290067829020361359Symbiobacterium thermophilum IAM 14863, complete genometransposase5e-1581.3
NC_014623:3462500:346424134642413464936696Stigmatella aurantiaca DW4/3-1 chromosome, complete genometransposase5e-1581.3
NC_006177:324363:3540793540793552241146Symbiobacterium thermophilum IAM 14863, complete genometransposase5e-1581.3
NC_007336:66000:692186921869592375Ralstonia eutropha JMP134 megaplasmid, complete sequence4e-1581.3
NC_006177:2211458:2220629222062922220051377Symbiobacterium thermophilum IAM 14863, complete genometransposase7e-1580.5
NC_014657:1775929:1784713178471317865391827Caldicellulosiruptor owensensis OL chromosome, complete genometransposase is4 family protein8e-1580.5
NC_008639:2968000:3021369302136930228981530Chlorobium phaeobacteroides DSM 266, complete genometransposase, IS4 family protein9e-1580.1
NC_008609:112340:1202191202191215771359Pelobacter propionicus DSM 2379, complete genometransposase, IS4 family protein2e-1479.3
NC_008609:3011059:3023875302387530252331359Pelobacter propionicus DSM 2379, complete genometransposase, IS4 family protein2e-1479.3
NC_008609:1976403:1976403197640319777611359Pelobacter propionicus DSM 2379, complete genometransposase, IS4 family protein2e-1479.3
NC_008609:1027838:1062510106251010638681359Pelobacter propionicus DSM 2379, complete genometransposase, IS4 family protein2e-1479.3
NC_008609:2787274:2796154279615427975121359Pelobacter propionicus DSM 2379, complete genometransposase, IS4 family protein2e-1479.3
NC_008609:3732192:3762208376220837635661359Pelobacter propionicus DSM 2379, complete genometransposase, IS4 family protein1e-1479.3
NC_006824:109735:1142801142801156351356Azoarcus sp. EbN1 plasmid 2, complete sequencetransposase4e-1478.2
NC_008740:443274:506529506529507020492Marinobacter aquaeolei VT8, complete genometransposase6e-1477.4
NC_012914:4238142:4243847424384742453971551Paenibacillus sp. JDR-2, complete genometransposase IS4 family protein1e-1376.6
NC_009439:442890:450481450481451080600Pseudomonas mendocina ymp, complete genometransposase1e-1376.6
NC_010803:2474554:2486790248679024881571368Chlorobium limicola DSM 245, complete genometransposase IS4 family protein3e-1375.1
NC_010803:242705:2551852551852565521368Chlorobium limicola DSM 245, complete genometransposase IS4 family protein3e-1375.1
NC_010803:2474554:2497545249754524989121368Chlorobium limicola DSM 245, complete genometransposase IS4 family protein3e-1375.1
NC_010803:634497:6450226450226463891368Chlorobium limicola DSM 245, complete genometransposase IS4 family protein3e-1375.1
NC_014724:439594:4674774674774692191743Lactobacillus amylovorus GRL 1112 chromosome, complete genomeTransposase5e-1374.7
NC_007796:1731500:1753568175356817552051638Methanospirillum hungatei JF-1, complete genometransposase3e-1272
NC_007796:3379614:3388462338846233900991638Methanospirillum hungatei JF-1, complete genometransposase3e-1272
NC_015572:65597:8760187601891121512Methylomonas methanica MC09 chromosome, complete genometransposase IS4 family protein8e-1270.5
NC_015572:3091707:3116765311676531182761512Methylomonas methanica MC09 chromosome, complete genometransposase IS4 family protein8e-1270.5
NC_014106:244831:2595082595082612771770Lactobacillus crispatus ST1, complete genomeTransposase1e-1169.7
NC_015578:247266:285433285433286065633Treponema primitia ZAS-2 chromosome, complete genome2e-1169.3
NC_016027:1647110:169304716930471693529483Gluconacetobacter xylinus NBRC 3288, complete genometransposase4e-1167.8
NC_007948:1972290:1988642198864219897031062Polaromonas sp. JS666, complete genometransposase IS4 family8e-1167
NC_010125:3854957:386551238655123865910399Gluconacetobacter diazotrophicus PAl 5, complete genometransposase8e-1167
NC_011059:2478075:2482332248233224836661335Prosthecochloris aestuarii DSM 271, complete genome1e-1066.6
NC_015577:3776295:3781146378114637826841539Treponema azotonutricium ZAS-9 chromosome, complete genometransposase, IS4 family protein2e-1065.9
NC_015577:1974821:1983757198375719852951539Treponema azotonutricium ZAS-9 chromosome, complete genometransposase, IS4 family protein2e-1065.9
NC_007802:1240989:125386212538621254596735Jannaschia sp. CCS1, complete genomeTransposase and inactivated derivatives-like3e-1065.5
NC_017342:1254000:1272885127288512745311647Staphylococcus aureus subsp. aureus TCH60 chromosome, completeIS1272 transposase4e-1065.1
NC_007168:454000:4721854721854738731689Staphylococcus haemolyticus JCSC1435, complete genomeIS1272 transposase8e-1063.9
NC_007168:2415361:2430541243054124319771437Staphylococcus haemolyticus JCSC1435, complete genomeIS1272 transposase8e-1063.9
NC_020164:2219612:2223900222390022256301731Staphylococcus warneri SG1, complete genomeIS1272 transposase8e-1063.9
NC_020164:2329340:2348085234808523497611677Staphylococcus warneri SG1, complete genomeIS1272 transposase7e-1063.9
NC_007168:195638:1978831978831995831701Staphylococcus haemolyticus JCSC1435, complete genomeIS1272 transposase7e-1063.9
NC_007168:1923723:1941999194199919436991701Staphylococcus haemolyticus JCSC1435, complete genomeIS1272 transposase7e-1063.9
NC_015733:864959:866264866264866662399Pseudomonas putida S16 chromosome, complete genomehypothetical protein1e-0963.5
NC_019897:1577015:1591916159191615932801365Thermobacillus composti KWC4 chromosome, complete genometransposase1e-0963.2
NC_011365:1171536:1180468118046811818441377Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genometransposase IS1182 family protein1e-0963.2
NC_004461:73390:7577975779774401662Staphylococcus epidermidis ATCC 12228, complete genometruncated transposase2e-0962.8
NC_012997:1820734:1860101186010118615401440Teredinibacter turnerae T7901, complete genometransposase, IS4 family protein2e-0962.8
NC_017341:1851972:187266818726681873141474Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,truncated transposase for IS12723e-0962
NC_007795:1774725:179558917955891796080492Staphylococcus aureus subsp. aureus NCTC 8325, complete genomehypothetical protein3e-0961.6
NC_009641:1833000:185242818524281852919492Staphylococcus aureus subsp. aureus str. Newman chromosome,putative transposase for IS12723e-0961.6
NC_016912:1732354:175321817532181753709492Staphylococcus aureus subsp. aureus VC40 chromosome, completeputative transposase for IS12723e-0961.6
NC_017347:1852500:187315818731581873649492Staphylococcus aureus subsp. aureus T0131 chromosome, completetransposase for IS12723e-0961.6
NC_015850:169180:1758881758881772821395Acidithiobacillus caldus SM-1 chromosome, complete genomeputative transposase4e-0961.2
NC_012489:4336790:437365843736584374491834Gemmatimonas aurantiaca T-27, complete genomehypothetical protein7e-0960.8
NC_020541:4122852:4160409416040941619231515Rhodanobacter sp. 2APBS1, complete genometransposase7e-0960.8
NC_012997:4906423:4937063493706349385651503Teredinibacter turnerae T7901, complete genometransposase IS4 family protein6e-0960.8
NC_016027:2047954:208998020899802090369390Gluconacetobacter xylinus NBRC 3288, complete genometransposase9e-0960.1
NC_019892:2684793:268833126883312688801471Singulisphaera acidiphila DSM 18658 chromosome, complete genome1e-0860.1
NC_018515:3865522:3865522386552238669491428Desulfosporosinus meridiei DSM 13257 chromosome, complete genometransposase2e-0859.3
NC_007498:3540945:3549778354977835513281551Pelobacter carbinolicus DSM 2380, complete genometransposase IS4 family3e-0858.9
NC_007498:1611986:1622664162266416242141551Pelobacter carbinolicus DSM 2380, complete genomeputative transposase or inactivated derivative3e-0858.9
NC_011894:983572:1002643100264310040251383Methylobacterium nodulans ORS 2060, complete genometransposase IS4 family protein2e-0858.9
NC_011894:6731115:6732889673288967342711383Methylobacterium nodulans ORS 2060, complete genometransposase IS4 family protein2e-0858.9
NC_012997:4906423:4919477491947749209761500Teredinibacter turnerae T7901, complete genometransposase IS4 family protein3e-0858.5
NC_010424:825117:8251178251178268501734Candidatus Desulforudis audaxviator MP104C, complete genometransposase, IS4 family protein3e-0858.5
NC_005957:2196000:221747322174732218045573Bacillus thuringiensis serovar konkukian str. 97-27, completepXO1-120 homology; transposase for IS6604e-0858.2
NC_015437:164194:1766371766371781811545Selenomonas sputigena ATCC 35185 chromosome, complete genomeIS4 family transposase5e-0857.8
NC_007626:3522265:358584035858403586724885Magnetospirillum magneticum AMB-1, complete genomeTransposase and inactivated derivative6e-0857.8
NC_017030:4062699:4075152407515240764321281Corallococcus coralloides DSM 2259 chromosome, complete genometransposase, is4-like protein8e-0857.4
NC_017030:4237034:4241367424136742426471281Corallococcus coralloides DSM 2259 chromosome, complete genometransposase, is4-like protein8e-0857.4
NC_014539:743523:7566597566597580741416Burkholderia sp. CCGE1003 chromosome 1, complete sequencetransposase IS4 family protein8e-0857
NC_005957:4680089:468161246816124682184573Bacillus thuringiensis serovar konkukian str. 97-27, completepXO1-120 homology; transposase for IS6601e-0756.6
NC_014335:1094000:111025411102541110826573Bacillus cereus biovar anthracis str. CI chromosome, completeIS660 transposase1e-0756.2
NC_005773:1675793:168705516870551687915861Pseudomonas syringae pv. phaseolicola 1448A, complete genomeISPsy22, transposase truncated3e-0755.1
NC_008262:227354:2277702277702293351566Clostridium perfringens SM101, complete genomeISCpe5, transposase4e-0754.7
NC_012997:2254000:2273459227345922750181560Teredinibacter turnerae T7901, complete genometransposase, IS4 family protein4e-0754.7
NC_009720:622262:6295886295886309641377Xanthobacter autotrophicus Py2, complete genometransposase IS4 family protein8e-0753.9
NC_009050:212270:2768072768072781891383Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequencetransposase, IS4 family protein1e-0653.5
NC_010514:6000:2045920459218321374Methylobacterium radiotolerans JCM 2831 plasmid pMRAD03, complete9e-0753.5
NC_015589:2480365:2501265250126525029041640Desulfotomaculum ruminis DSM 2154 chromosome, complete genome1e-0653.1
NC_008593:1513107:1533669153366915350931425Clostridium novyi NT, complete genomeISBma2, transposase3e-0652
NC_008593:609723:6264666264666279051440Clostridium novyi NT, complete genomeISBma2, transposase3e-0652
NC_015425:2144639:2174964217496421762831320Clostridium botulinum BKT015925 chromosome, complete genomeISBma2, transposase3e-0652
NC_015425:2144639:2182910218291021841061197Clostridium botulinum BKT015925 chromosome, complete genomeISBma2, transposase3e-0651.6
NC_014483:3339926:334309933430993343671573Paenibacillus polymyxa E681 chromosome, complete genomeTransposase4e-0651.6
NC_007796:2387002:2412642241264224140931452Methanospirillum hungatei JF-1, complete genome5e-0651.2
NC_007796:412000:4266144266144282241611Methanospirillum hungatei JF-1, complete genometransposase, IS45e-0651.2