Pre_GI: BLASTP Hits

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Query: NC_017249:4365935:4376785 Bradyrhizobium japonicum USDA 6, complete genome

Start: 4376785, End: 4377621, Length: 837

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017249:5255967:525596752559675256803837Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein2e-112405
NC_016027:1776300:178071717807171781520804Gluconacetobacter xylinus NBRC 3288, complete genomeDNA recombinase8e-2097.8
NC_013729:2287884:229122822912282292154927Kribbella flavida DSM 17836, complete genomeBifunctional DNA primase/polymerase5e-1788.2
NC_015275:4055148:4096380409638040976301251Clostridium lentocellum DSM 5427 chromosome, complete genomeBifunctional DNA primase/polymerase6e-1684.7
NC_017030:8599515:8615278861527886180072730Corallococcus coralloides DSM 2259 chromosome, complete genomeBifunctional DNA Primase/polymerase9e-1684.3
NC_009012:2356500:2366420236642023685732154Clostridium thermocellum ATCC 27405, complete genomephage / plasmid primase, P4 family9e-1477.4
NC_009012:3324000:333976333397633340554792Clostridium thermocellum ATCC 27405, complete genomehypothetical protein8e-1374.3
NC_009012:3354477:3383076338307633852292154Clostridium thermocellum ATCC 27405, complete genomephage / plasmid primase, P4 family2e-1272.8
NC_010572:3363830:340155534015553402439885Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein8e-1271.2
NC_009012:3354477:3362822336282233649752154Clostridium thermocellum ATCC 27405, complete genomephage / plasmid primase, P4 family7e-1271.2
NC_020126:2381380:2397905239790524004542550Myxococcus stipitatus DSM 14675, complete genomeBifunctional DNA Primase/polymerase3e-1169.3
NC_009012:2356500:236035523603552361155801Clostridium thermocellum ATCC 27405, complete genomehypothetical protein8e-1167.8
NC_008060:476861:4895804895804918202241Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencePhage-plasmid primase P4-like8e-1167.8
NC_008542:1021848:1034227103422710364672241Burkholderia cenocepacia HI2424 chromosome 1, complete sequencephage/plasmid primase, P4 family8e-1167.8
NC_016111:613729:620521620521621390870Streptomyces cattleya NRRL 8057, complete genomebifunctional DNA primase/polymerase1e-1067
NC_015520:3038770:305657330565733057388816Mahella australiensis 50-1 BON chromosome, complete genomebifunctional DNA primase/polymerase3e-1066.2
NC_012803:3691:296482964830592945Micrococcus luteus NCTC 2665, complete genomehypothetical protein2e-1066.2
NC_009012:3354477:337019433701943370994801Clostridium thermocellum ATCC 27405, complete genomeprophage Lp4 protein 7, DNA replication7e-1064.7
NC_010511:1273610:129396712939671294836870Methylobacterium sp. 4-46 chromosome, complete genomebifunctional DNA primase/polymerase8e-1064.3
NC_014815:3272791:329106232910623291961900Micromonospora sp. L5 chromosome, complete genomebifunctional DNA primase/polymerase5e-0858.5
NC_013929:5952380:595784059578405958745906Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein6e-0858.2
NC_013729:380312:397209397209398081873Kribbella flavida DSM 17836, complete genomeBifunctional DNA primase/polymerase4e-0755.8
NC_013729:5982000:599219759921975993075879Kribbella flavida DSM 17836, complete genomeBifunctional DNA primase/polymerase5e-0755.5
NC_014393:1022843:1027660102766010303412682Clostridium cellulovorans 743B chromosome, complete genomeBifunctional DNA primase/polymerase2e-0653.5
NC_015312:1191633:119453211945321195479948Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeBifunctional DNA primase/polymerase3e-0652.8
NC_019673:1988853:202206520220652022901837Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein3e-0652.8
NC_015656:5084767:509173950917395092617879Frankia symbiont of Datisca glomerata chromosome, complete genomeBifunctional DNA primase/polymerase3e-0652.4
NC_015656:132633:159042159042159680639Frankia symbiont of Datisca glomerata chromosome, complete genomeBifunctional DNA primase/polymerase3e-0652.4
NC_013729:3573000:359049435904943591417924Kribbella flavida DSM 17836, complete genomeBifunctional DNA primase/polymerase5e-0652
NC_009142:7820251:7835759783575978367721014Saccharopolyspora erythraea NRRL 2338, complete genomehypothetical protein6e-0651.6