Pre_GI: BLASTP Hits

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Query: NC_017249:4365935:4366746 Bradyrhizobium japonicum USDA 6, complete genome

Start: 4366746, End: 4368578, Length: 1833

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013209:2384826:2402891240289124050262136Acetobacter pasteurianus IFO 3283-01, complete genomealcohol dehydrogenase large subunit7e-1169.3
NC_017150:2290681:2310637231063723127722136Acetobacter pasteurianus IFO 3283-01-42C, complete genomealcohol dehydrogenase large subunit7e-1169.3
NC_017100:2383487:2404098240409824062332136Acetobacter pasteurianus IFO 3283-03, complete genomealcohol dehydrogenase large subunit7e-1169.3
NC_017121:2383375:2401440240144024035752136Acetobacter pasteurianus IFO 3283-07, complete genomealcohol dehydrogenase large subunit7e-1169.3
NC_017108:2383370:2401435240143524035702136Acetobacter pasteurianus IFO 3283-12, complete genomealcohol dehydrogenase large subunit7e-1169.3
NC_017125:2383467:2404078240407824062132136Acetobacter pasteurianus IFO 3283-22, complete genomealcohol dehydrogenase large subunit7e-1169.3
NC_017146:2383509:2404120240412024062552136Acetobacter pasteurianus IFO 3283-26, complete genomealcohol dehydrogenase large subunit7e-1169.3
NC_017111:2383388:2401453240145324035882136Acetobacter pasteurianus IFO 3283-32, complete genomealcohol dehydrogenase large subunit7e-1169.3
NC_015510:2119336:2119336211933621212221887Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomemetallophosphoesterase6e-0653.1
NC_013158:1620761:1624670162467016260431374Halorhabdus utahensis DSM 12940, complete genomePyrrolo-quinoline quinone2e-0861.6
NC_014830:335380:3543473543473559091563Intrasporangium calvum DSM 43043 chromosome, complete genomePyrrolo-quinoline quinone repeat-containing protein8e-51202
NC_008254:3143770:3143770314377031455211752Mesorhizobium sp. BNC1, complete genomePyrrolo-quinoline quinone1e-1068.9
NC_007681:218921:2425782425782438161239Methanosphaera stadtmanae DSM 3091, complete genomeconserved hypothetical membrane-spanning protein1e-0758.5
NC_012988:5516872:5539856553985655416941839Methylobacterium extorquens DM4, complete genomequinoprotein alcohol dehydrogenase4e-0860.1
NC_010172:5036385:5053395505339550552331839Methylobacterium extorquens PA1, complete genomePyrrolo-quinoline quinone3e-0860.8
NC_010172:57500:1033131033131051301818Methylobacterium extorquens PA1, complete genomePQQ-dependent dehydrogenase, methanol/ethanol family9e-0859.3
NC_019974:3013338:3043248304324830445311284Natronococcus occultus SP4, complete genomeWD40-like repeat protein9e-1065.9
NC_019974:1689486:1709960170996017116781719Natronococcus occultus SP4, complete genomeglucose dehydrogenase4e-1170.5
NC_015703:4348545:4352994435299443541811188Runella slithyformis DSM 19594 chromosome, complete genomePyrrolo-quinoline quinone repeat-containing protein2e-0757.8
NC_015594:410454:4176144176144199772364Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completemembrane-bound PQQ-dependent dehydrogenase glucose/quinate/shikimate family3e-0654.3
NC_008048:389645:3906863906863928692184Sphingopyxis alaskensis RB2256, complete genomePyrrolo-quinoline quinone5e-0860.1
NC_014963:5034904:5053002505300250552302229Terriglobus saanensis SP1PR4 chromosome, complete genomeQuinoprotein glucose dehydrogenase7e-0962.8
NC_014931:6203872:6226203622620362283112109Variovorax paradoxus EPS chromosome, complete genomePQQ-dependent dehydrogenase, methanol/ethanol family9e-1789
NC_012791:721813:7593067593067611471842Variovorax paradoxus S110 chromosome 1, complete genomePQQ-dependent dehydrogenase, methanol/ethanol family4e-0653.5
NC_012792:962292:9784659784659802581794Variovorax paradoxus S110 chromosome 2, complete genomePQQ-dependent dehydrogenase, methanol/ethanol family2e-1688.2