Pre_GI: BLASTP Hits

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Query: NC_017249:3229500:3233748 Bradyrhizobium japonicum USDA 6, complete genome

Start: 3233748, End: 3234140, Length: 393

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017249:4398000:440589244058924406293402Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein7e-50195
NC_004463:5722468:574022157402215740616396Bradyrhizobium japonicum USDA 110, complete genometwo-component response regulator2e-36150
NC_004463:8401060:840190384019038402280378Bradyrhizobium japonicum USDA 110, complete genometwo-component response regulator2e-27120
NC_004463:2344128:235585723558572356150294Bradyrhizobium japonicum USDA 110, complete genomeresponse regulator2e-22104
NC_017249:7917586:792609379260937926326234Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein1e-2098.6
NC_018000:2054098:205832620583262058583258Sinorhizobium fredii USDA 257 chromosome, complete genomehypothetical protein9e-1682.4
NC_016010:1822212:1896930189693018997852856Xanthomonas axonopodis pv. citrumelo F1 chromosome, completesensory box histidine kinase/response regulator hybrid5e-0959.7
NC_011757:3486283:3521250352125035240782829Methylobacterium chloromethanicum CM4, complete genomePAS/PAC sensor hybrid histidine kinase2e-0858.2
NC_020209:2838582:2838582283858228424063825Pseudomonas poae RE*1-1-14, complete genomesensor histidine kinase4e-0857
NC_007761:3047321:305125730512573051790534Rhizobium etli CFN 42, complete genomeprobable two-component response regulator protein4e-0856.6
NC_017249:7917586:7930165793016579321591995Bradyrhizobium japonicum USDA 6, complete genometwo-component hybrid sensor and regulator1e-0755.5
NC_004463:2344128:2350024235002423519281905Bradyrhizobium japonicum USDA 110, complete genometwo-component hybrid sensor and regulator1e-0755.1
NC_011146:2485625:2485625248562524894073783Geobacter bemidjiensis Bem, complete genomemulti-sensor hybrid histidine kinase2e-0754.7
NC_016010:1822212:189990018999001900274375Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeresponse regulator2e-0754.7
NC_012918:1814000:183116018311601831861702Geobacter sp. M21 chromosome, complete genomeXRE family transcriptional regulator2e-0754.3
NC_014314:238043:278609278609279148540Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeresponse regulator receiver protein3e-0753.9
NC_017062:508500:525799525799526467669Rickettsia typhi str. B9991CWPP chromosome, complete genomeresponse regulator protein OmpR4e-0753.5
NC_015732:2680182:2699034269903427016432610Spirochaeta caldaria DSM 7334 chromosome, complete genomemulti-sensor hybrid histidine kinase6e-0752.8
NC_017249:7917586:7926765792676579284471683Bradyrhizobium japonicum USDA 6, complete genometwo-component hybrid sensor and regulator9e-0752.4
NC_000963:506500:524650524650525327678Rickettsia prowazekii str. Madrid E, complete genomePETR PROTEIN (ompR)8e-0752.4
NC_017049:505000:522767522767523444678Rickettsia prowazekii str. Chernikova chromosome, complete genomePETR protein (ompR)8e-0752.4
NC_017050:506500:524653524653525330678Rickettsia prowazekii str. Katsinyian chromosome, complete genomePETR protein (ompR)8e-0752.4
NC_017051:505000:522778522778523455678Rickettsia prowazekii str. Dachau chromosome, complete genomePETR protein (ompR)8e-0752.4
NC_017056:506500:524632524632525309678Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genomePETR protein (ompR)8e-0752.4
NC_017057:507500:524854524854525531678Rickettsia prowazekii str. RpGvF24 chromosome, complete genomePETR protein (ompR)1e-0652
NC_017048:849000:866789866789867466678Rickettsia prowazekii str. GvV257 chromosome, complete genomePETR protein (ompR)1e-0652
NC_010511:1351000:1376832137683213781901359Methylobacterium sp. 4-46 chromosome, complete genometwo component sigma-54 specific Fis family transcriptional regulator1e-0652
NC_007759:964000:9817439817439831161374Syntrophus aciditrophicus SB, complete genomeresponse regulator containing sigma 54 interaction domain1e-0651.6
NC_004463:2344128:2353736235373623554181683Bradyrhizobium japonicum USDA 110, complete genometwo-component hybrid sensor and regulator2e-0651.2
NC_014006:611592:6125216125216145842064Sphingobium japonicum UT26S chromosome 1, complete genomesignal transduction histidine kinase2e-0651.2
NC_008609:1976403:2056927205692720599112985Pelobacter propionicus DSM 2379, complete genomemulti-sensor hybrid histidine kinase2e-0651.2
NC_015164:1158796:117254411725441173254711Bacteroides salanitronis DSM 18170 chromosome, complete genometwo component transcriptional regulator, winged helix family2e-0651.2
NC_011071:1178423:1178423117842311804922070Stenotrophomonas maltophilia R551-3, complete genomePAS/PAC sensor hybrid histidine kinase3e-0650.8
NC_010505:5525461:5554984555498455578242841Methylobacterium radiotolerans JCM 2831, complete genomemulti-sensor hybrid histidine kinase2e-0650.8
NC_014924:2399524:2397876239787623995371662Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomehistidine kinase3e-0650.4
NC_010511:3106418:3113004311300431157872784Methylobacterium sp. 4-46 chromosome, complete genomeintegral membrane sensor hybrid histidine kinase4e-0650.1
NC_007606:3842708:3859899385989938621632265Shigella dysenteriae Sd197, complete genomeputative histidine kinase4e-0650.1
NC_011757:517000:5364535364535397223270Methylobacterium chloromethanicum CM4, complete genomemulti-sensor hybrid histidine kinase5e-0650.1
NC_011146:3376816:3393758339375833975973840Geobacter bemidjiensis Bem, complete genomemulti-sensor hybrid histidine kinase6e-0649.7
NC_002655:5194804:5196438519643851987082271Escherichia coli O157:H7 EDL933, complete genomeputative histidine kinase6e-0649.7
NC_002695:5164819:5166453516645351687232271Escherichia coli O157:H7 str. Sakai, complete genomeputative histidine protein kinase6e-0649.7
NC_011353:5240020:5241654524165452439242271Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein6e-0649.7
NC_013008:5196080:5197714519771451999842271Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehistidine kinase6e-0649.7
NC_013941:5013695:5015233501523350175902358Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeIntegral membrane sensor hybrid histidine kinase5e-0649.7
NC_013223:1090397:1100795110079511030052211Desulfohalobium retbaense DSM 5692, complete genomePAS/PAC sensor hybrid histidine kinase5e-0649.7
NC_010172:798923:8172928172928189051614Methylobacterium extorquens PA1, complete genomeATP-binding region ATPase domain protein8e-0649.3