Pre_GI: BLASTP Hits

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Query: NC_017249:3181976:3187961 Bradyrhizobium japonicum USDA 6, complete genome

Start: 3187961, End: 3188287, Length: 327

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020453:1785473:1792687179268717938231137Agromonas oligotrophica S58 DNA, complete genomesignal transduction histidine kinase6e-39159
NC_017249:1476500:148688714868871487303417Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein4e-22103
NC_010511:7024412:705057470505747050954381Methylobacterium sp. 4-46 chromosome, complete genomeresponse regulator receiver protein1e-21102
NC_010172:3712000:372749337274933727873381Methylobacterium extorquens PA1, complete genomeresponse regulator receiver4e-21100
NC_020453:1785473:179139217913921791775384Agromonas oligotrophica S58 DNA, complete genomeresponse regulator receiver domain-containing protein6e-2199.4
NC_012988:4075429:409341640934164093715300Methylobacterium extorquens DM4, complete genome4e-1993.2
NC_014640:4532095:453331345333134533702390Achromobacter xylosoxidans A8 chromosome, complete genomeresponse regulator 121e-1375.5
NC_011757:4293000:431211443121144312599486Methylobacterium chloromethanicum CM4, complete genomeresponse regulator receiver protein3e-1373.9
NC_010505:2657683:266680126668012667211411Methylobacterium radiotolerans JCM 2831, complete genomeresponse regulator receiver protein6e-1372.8
NC_007761:3047321:305125730512573051790534Rhizobium etli CFN 42, complete genomeprobable two-component response regulator protein9e-1372.4
NC_010505:3376322:3394677339467733967672091Methylobacterium radiotolerans JCM 2831, complete genomePAS/PAC sensor hybrid histidine kinase1e-1168.6
NC_011757:4293000:4334529433452943362501722Methylobacterium chloromethanicum CM4, complete genomePAS/PAC sensor hybrid histidine kinase1e-1065.5
NC_010322:3315024:334008633400863340448363Pseudomonas putida GB-1 chromosome, complete genomeresponse regulator receiver protein2e-1064.3
NC_010172:798923:8172928172928189051614Methylobacterium extorquens PA1, complete genomeATP-binding region ATPase domain protein3e-1063.5
NC_011757:5742290:5768649576864957713212673Methylobacterium chloromethanicum CM4, complete genomemulti-sensor hybrid histidine kinase6e-0959.7
NC_011757:517000:5364535364535397223270Methylobacterium chloromethanicum CM4, complete genomemulti-sensor hybrid histidine kinase7e-0959.3
NC_012988:4633930:463700246370024637391390Methylobacterium extorquens DM4, complete genomeresponse regulator9e-0958.9
NC_010172:4185904:419029441902944190683390Methylobacterium extorquens PA1, complete genomeresponse regulator receiver9e-0958.9
NC_011757:4293000:429384442938444294233390Methylobacterium chloromethanicum CM4, complete genomeresponse regulator receiver protein9e-0958.9
NC_015740:3678342:371320437132043713704501Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein1e-0858.9
NC_011757:3540992:3552751355275135544931743Methylobacterium chloromethanicum CM4, complete genomehistidine kinase1e-0858.5
NC_011757:5048714:5074765507476550768222058Methylobacterium chloromethanicum CM4, complete genomehistidine kinase1e-0858.2
NC_007626:3522265:3595421359542135977692349Magnetospirillum magneticum AMB-1, complete genomeSignal transduction histidine kinase2e-0858.2
NC_012808:4235567:423864042386404239029390Methylobacterium extorquens AM1, complete genomeputative response regulator; (CheY-like protein)3e-0857.4
NC_012811:959725:973030973030973848819Methylobacterium extorquens AM1 megaplasmid, complete sequencehypothetical protein4e-0753.5
NC_011894:6259649:6272210627221062742312022Methylobacterium nodulans ORS 2060, complete genomePAS/PAC sensor hybrid histidine kinase4e-0753.5
NC_004578:3241618:3258416325841632600201605Pseudomonas syringae pv. tomato str. DC3000, complete genomesensory box histidine kinase/response regulator8e-0752.4
NC_010634:4463727:4467399446739944699542556Yersinia pseudotuberculosis PB1/+, complete genomemulti-sensor hybrid histidine kinase1e-0652
NC_003919:3812778:385602138560213856389369Xanthomonas axonopodis pv. citri str. 306, complete genomesingle-domain response regulator2e-0650.8
NC_016626:1699500:1709507170950717110331527Burkholderia sp. YI23 plasmid byi_1p, complete sequencePAS/PAC sensor hybrid histidine kinase3e-0650.8
NC_020209:1903830:1920733192073319224031671Pseudomonas poae RE*1-1-14, complete genomeputative two-component sensor histidine kinase4e-0650.4
NC_014006:611592:6125216125216145842064Sphingobium japonicum UT26S chromosome 1, complete genomesignal transduction histidine kinase4e-0650.4
NC_017249:2073558:2073998207399820757671770Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein4e-0650.1
NC_011757:39881:4793747937503692433Methylobacterium chloromethanicum CM4, complete genomePAS/PAC sensor hybrid histidine kinase6e-0649.3
NC_007606:3842708:3859899385989938621632265Shigella dysenteriae Sd197, complete genomeputative histidine kinase6e-0649.3
NC_013941:5013695:5015233501523350175902358Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeIntegral membrane sensor hybrid histidine kinase8e-0649.3
NC_002695:5164819:5166453516645351687232271Escherichia coli O157:H7 str. Sakai, complete genomeputative histidine protein kinase9e-0648.9
NC_011353:5240020:5241654524165452439242271Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein9e-0648.9
NC_013008:5196080:5197714519771451999842271Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehistidine kinase9e-0648.9
NC_010725:4035397:4040090404009040425132424Methylobacterium populi BJ001, complete genomemulti-sensor hybrid histidine kinase8e-0648.9
NC_002655:5194804:5196438519643851987082271Escherichia coli O157:H7 EDL933, complete genomeputative histidine kinase9e-0648.9