Pre_GI: BLASTP Hits

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Query: NC_017249:3119000:3133550 Bradyrhizobium japonicum USDA 6, complete genome

Start: 3133550, End: 3134740, Length: 1191

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004463:5540924:5540924554092455421141191Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein0701
NC_012560:3416451:3424243342424334255321290Azotobacter vinelandii DJ, complete genomeesterase, poly(3-hydroxybutyrate) depolymerase9e-98357
NC_021150:3416450:3424242342424234255311290Azotobacter vinelandii CA6, complete genomeesterase, poly(3-hydroxybutyrate) depolymerase9e-98357
NC_018012:1076839:1082648108264810837541107Thiocystis violascens DSM 198 chromosome, complete genomeesterase, PHB depolymerase family2e-78293
NC_015727:764744:7660787660787672681191Cupriavidus necator N-1 plasmid BB1p, complete sequencepoly(3-hydroxyalkanoate) depolymerase1e-72273
NC_012808:1122341:112641111264111127316906Methylobacterium extorquens AM1, complete genomeEsterase, PHB depolymerase (C-terminal fragment)1e-71270
NC_013757:1212308:1237229123722912384611233Geodermatophilus obscurus DSM 43160, complete genomeesterase, PHB depolymerase family2e-64246
NC_016590:548312:5564955564955576371143Burkholderia sp. YI23 chromosome 3, complete sequenceesterase, poly(3-hydroxybutyrate) depolymerase8e-61234
NC_010801:238430:2442422442422453661125Burkholderia multivorans ATCC 17616 chromosome 3, completepoly(3-hydroxybutyrate) depolymerase1e-27124
NC_008314:2686851:2711012271101227121091098Ralstonia eutropha H16 chromosome 2, complete sequencePoly(3-hydroxybutyrate) depolymerase9e-28124
NC_008062:81338:9294992949942141266Burkholderia cenocepacia AU 1054 chromosome 3, complete sequencepoly(3-hydroxybutyrate) depolymerase-like4e-27122
NC_008544:55451:7076770767720321266Burkholderia cenocepacia HI2424 chromosome 3, complete sequencepoly(3-hydroxybutyrate) depolymerase-like protein5e-27122
NC_012721:2021885:2044340204434020453741035Burkholderia glumae BGR1 chromosome 2, complete genomePolyhydroxybutyrate depolymerase domain protein4e-26119
NC_018681:867230:895793895793896755963Nocardia brasiliensis ATCC 700358 chromosome, complete genomeesterase, PHB depolymerase1e-20100
NC_015711:2050360:205346620534662054344879Myxococcus fulvus HW-1 chromosome, complete genomePHB depolymerase family esterase3e-2099.8
NC_013159:3423500:344169934416993442694996Saccharomonospora viridis DSM 43017, complete genomeesterase, PHB depolymerase family3e-1479.7
NC_007164:1495804:1510283151028315113711089Corynebacterium jeikeium K411, complete genomeputative polyhydroxybutyrate depolymerase3e-0756.6