Pre_GI: BLASTP Hits

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Query: NC_017249:18493:41530 Bradyrhizobium japonicum USDA 6, complete genome

Start: 41530, End: 42072, Length: 543

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004463:18497:415374153742445909Bradyrhizobium japonicum USDA 110, complete genomeprobable transglycosylase4e-92336
NC_007925:3933765:395291039529103953635726Rhodopseudomonas palustris BisB18, complete genomeLytic transglycosylase, catalytic2e-42171
NC_009720:4406991:444047844404784441275798Xanthobacter autotrophicus Py2, complete genomelytic transglycosylase catalytic3e-42171
NC_017249:3119000:312077331207733121489717Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein5e-39160
NC_008686:1472899:147489714748971475661765Paracoccus denitrificans PD1222 chromosome 1, complete sequenceLytic transglycosylase, catalytic7e-38156
NC_011386:3723019:257725773497921Oligotropha carboxidovorans OM5, complete genomelytic transglycosylase, catalytic5e-33140
NC_011365:1135750:116084511608451161546702Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomelytic transglycosylase1e-32139
NC_016027:2512297:2515110251511025162521143Gluconacetobacter xylinus NBRC 3288, complete genomemurein transglycosylase3e-32137
NC_014834:959986:959986959986960753768Rhodopseudomonas palustris DX-1 chromosome, complete genomelytic transglycosylase3e-32137
NC_010125:381711:399853399853400524672Gluconacetobacter diazotrophicus PAl 5, complete genomeputative lytic transglycosylase5e-31134
NC_014100:2782000:279910827991082799737630Caulobacter segnis ATCC 21756 chromosome, complete genomelytic transglycosylase7e-31133
NC_016027:1647110:1669092166909216702611170Gluconacetobacter xylinus NBRC 3288, complete genomemurein transglycosylase3e-29127
NC_013209:2476039:2490068249006824913991332Acetobacter pasteurianus IFO 3283-01, complete genomemurein transglycosylase9e-27119
NC_017100:2476822:2491275249127524926061332Acetobacter pasteurianus IFO 3283-03, complete genomemurein transglycosylase9e-27119
NC_017108:2474583:2488612248861224899431332Acetobacter pasteurianus IFO 3283-12, complete genomemurein transglycosylase9e-27119
NC_017111:2474601:2488630248863024899611332Acetobacter pasteurianus IFO 3283-32, complete genomemurein transglycosylase9e-27119
NC_017121:2474588:2488617248861724899481332Acetobacter pasteurianus IFO 3283-07, complete genomemurein transglycosylase9e-27119
NC_017125:2476802:2491255249125524925861332Acetobacter pasteurianus IFO 3283-22, complete genomemurein transglycosylase9e-27119
NC_017146:2476844:2491297249129724926281332Acetobacter pasteurianus IFO 3283-26, complete genomemurein transglycosylase9e-27119
NC_017150:2383361:2397814239781423991451332Acetobacter pasteurianus IFO 3283-01-42C, complete genomemurein transglycosylase9e-27119
NC_009719:1972545:197254519725451973300756Parvibaculum lavamentivorans DS-1 chromosome, complete genomelytic transglycosylase catalytic subunit2e-26118
NC_010338:2443765:244503624450362445866831Caulobacter sp. K31, complete genomeLytic transglycosylase catalytic4e-26117
NC_015186:2908387:291296029129602913463504Acidiphilium multivorum AIU301, complete genomehypothetical protein5e-25114
NC_007760:4055860:409261540926154093244630Anaeromyxobacter dehalogenans 2CP-C, complete genomeLytic transglycosylase, catalytic1e-1272.8
NC_014733:1073540:107696010769601077583624Methylovorus sp. MP688 chromosome, complete genomelytic transglycosylase catalytic2e-1272
NC_014972:137184:158025158025158633609Desulfobulbus propionicus DSM 2032 chromosome, complete genomelytic transglycosylase catalytic2e-1271.6
NC_009483:5113729:512062851206285121383756Geobacter uraniireducens Rf4 chromosome, complete genomelytic transglycosylase2e-1271.6
NC_014972:544146:547516547516548247732Desulfobulbus propionicus DSM 2032 chromosome, complete genomelytic transglycosylase catalytic3e-1271.2
NC_011891:4104000:412519141251914125820630Anaeromyxobacter dehalogenans 2CP-1, complete genomeLytic transglycosylase catalytic7e-1270.1
NC_009675:4281249:429915642991564299785630Anaeromyxobacter sp. Fw109-5 chromosome, complete genomelytic transglycosylase catalytic subunit1e-1169.3
NC_014220:1858747:187483218748321875473642Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeLytic transglycosylase catalytic2e-1168.6
NC_007644:1638083:164380416438041644424621Moorella thermoacetica ATCC 39073, complete genomeLytic transglycosylase, catalytic3e-1167.8
NC_014311:1888686:189788118978811898510630Ralstonia solanacearum PSI07 chromosome, complete genometransglycosylase8e-1166.6
NC_015850:2048251:211015521101552111087933Acidithiobacillus caldus SM-1 chromosome, complete genomelytic transglycosylase3e-1064.7
NC_014150:446359:453240453240453983744Brachyspira murdochii DSM 12563 chromosome, complete genomeLytic transglycosylase catalytic8e-1063.5
NC_015850:1155376:117330311733031173821519Acidithiobacillus caldus SM-1 chromosome, complete genomelytic transglycosylase1e-0962.4
NC_011894:2184956:220462022046202205339720Methylobacterium nodulans ORS 2060, complete genomeLytic transglycosylase catalytic1e-0962.4
NC_017179:281069:299909299909300577669Clostridium difficile BI1, complete genometransglycosylase1e-0962.4
NC_008593:2020473:203784220378422038495654Clostridium novyi NT, complete genomelytic murein transglycosylase, putative2e-0962
NC_018607:1803500:180877418087741809490717Brachyspira pilosicoli B2904 chromosome, complete genomelytic transglycosylase2e-0961.6
NC_007517:2165657:217968121796812180292612Geobacter metallireducens GS-15, complete genomeLytic transglycosylase, catalytic3e-0961.6
NC_004757:2412161:241216124121612413066906Nitrosomonas europaea ATCC 19718, complete genomeSLT domain3e-0961.2
NC_010718:1959517:198001019800101980597588Natranaerobius thermophilus JW/NM-WN-LF, complete genomeLytic transglycosylase catalytic4e-0961.2
NC_017243:1229597:124215712421571242882726Brachyspira intermedia PWS/A chromosome, complete genomelytic transglycosylase5e-0960.5
NC_013792:109203:1174391174391196102172Bacillus pseudofirmus OF4 plasmid pBpOF4-01, complete sequenceSPbeta phage protein; lytic transglycosylase5e-0960.5
NC_014376:3671441:368650836865083687230723Clostridium saccharolyticum WM1 chromosome, complete genomeLytic transglycosylase catalytic6e-0960.5
NC_018604:1045774:105879510587951059511717Brachyspira pilosicoli WesB complete genomelytic transglycosylase7e-0960.1
NC_012225:787737:794109794109794822714Brachyspira hyodysenteriae WA1, complete genomelytic transglycosylase8e-0960.1
NC_013173:1231213:123625212362521236854603Desulfomicrobium baculatum DSM 4028, complete genomeLytic transglycosylase catalytic1e-0859.3
NC_019908:982471:989710989710990426717Brachyspira pilosicoli P43/6/78 chromosome, complete genomelytic transglycosylase1e-0858.9
NC_014330:2268773:228178822817882282501714Brachyspira pilosicoli 95/1000 chromosome, complete genomelytic transglycosylase1e-0858.9
NC_015425:2277570:229041522904152291074660Clostridium botulinum BKT015925 chromosome, complete genomelytic murein transglycosylase2e-0858.9
NC_012914:1824955:182495518249551825521567Paenibacillus sp. JDR-2, complete genomeLytic transglycosylase catalytic2e-0858.9
NC_007759:1571425:157745515774551578108654Syntrophus aciditrophicus SB, complete genomesoluble lytic murein transglycosylase3e-0858.2
NC_015318:1455444:147780914778091478426618Hippea maritima DSM 10411 chromosome, complete genomelytic transglycosylase catalytic subunit3e-0858.2
NC_013173:1356526:137746913774691377996528Desulfomicrobium baculatum DSM 4028, complete genomeLytic transglycosylase catalytic3e-0858.2
NC_009483:2854500:287564628756462876242597Geobacter uraniireducens Rf4 chromosome, complete genomelytic transglycosylase9e-0856.6
NC_015437:697051:7302427302427320621821Selenomonas sputigena ATCC 35185 chromosome, complete genomeLytic transglycosylase catalytic8e-0856.6
NC_009664:533021:5479845479845490901107Kineococcus radiotolerans SRS30216, complete genomeLytic transglycosylase catalytic8e-0856.6
NC_013194:963735:997671997671998336666Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeLytic transglycosylase catalytic1e-0756.2
NC_014733:1857020:188059718805971881241645Methylovorus sp. MP688 chromosome, complete genomelytic transglycosylase catalytic1e-0756.2
NC_010511:2079744:2132561213256121335831023Methylobacterium sp. 4-46 chromosome, complete genomelytic transglycosylase2e-0755.5
NC_015572:1421782:143602314360231436871849Methylomonas methanica MC09 chromosome, complete genomelytic transglycosylase catalytic subunit3e-0754.7
NC_015580:3252534:3252534325253432545011968Novosphingobium sp. PP1Y, complete genomelytic transglycosylase catalytic subunit subunit3e-0754.7
NC_011283:4170369:4194180419418041961051926Klebsiella pneumoniae 342 chromosome, complete genometransglycosylase SLT domain-containing protein3e-0754.7
NC_010511:6067000:6100598610059861016201023Methylobacterium sp. 4-46 chromosome, complete genomelytic transglycosylase4e-0754.3
NC_000964:2146000:2248350224835022552076858Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein8e-0753.1
NC_014219:1736000:175182117518211752510690Bacillus selenitireducens MLS10 chromosome, complete genomeLytic transglycosylase catalytic1e-0652.8
NC_010172:57500:9066790667917581092Methylobacterium extorquens PA1, complete genomeLytic transglycosylase catalytic2e-0652.4
NC_014550:3377834:3386168338616833872981131Arthrobacter arilaitensis Re117, complete genomeputative M23 family peptidase2e-0652
NC_017030:8766757:877403587740358774856822Corallococcus coralloides DSM 2259 chromosome, complete genometransglycosylase2e-0652
NC_009012:3224000:323867632386763239362687Clostridium thermocellum ATCC 27405, complete genomeLytic transglycosylase, catalytic2e-0652
NC_007760:3735749:374974437497443750202459Anaeromyxobacter dehalogenans 2CP-C, complete genomeLytic transglycosylase, catalytic2e-0652
NC_015850:110364:123790123790124380591Acidithiobacillus caldus SM-1 chromosome, complete genomelytic transglycosylase4e-0650.8
NC_016845:2306744:2309391230939123113942004Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,lytic transglycosylase, catalytic6e-0650.4
NC_014121:3627588:3644135364413536459041770Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein6e-0650.4
NC_016845:1285435:1323839132383913257641926Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,transglycosylase9e-0649.7