Pre_GI: BLASTP Hits

Some Help

Query: NC_017249:18493:39323 Bradyrhizobium japonicum USDA 6, complete genome

Start: 39323, End: 40498, Length: 1176

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004463:18497:3932939329412031875Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein0771
NC_009720:4406991:4436904443690444386431740Xanthobacter autotrophicus Py2, complete genomehypothetical protein2e-170598
NC_014834:959986:9609979609979627361740Rhodopseudomonas palustris DX-1 chromosome, complete genometype IV secretory pathway VirD2 component1e-167589
NC_008686:1472899:1472899147289914746531755Paracoccus denitrificans PD1222 chromosome 1, complete sequencehypothetical protein1e-159562
NC_010125:381711:4023154023154040541740Gluconacetobacter diazotrophicus PAl 5, complete genomehypothetical protein5e-145514
NC_016027:2512297:2516500251650025182421743Gluconacetobacter xylinus NBRC 3288, complete genomehypothetical protein3e-134478
NC_011365:1135750:1157246115724611590001755Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomehypothetical protein5e-113407
NC_007643:955362:9709319709319727421812Rhodospirillum rubrum ATCC 11170, complete genomehypothetical protein6e-108390
NC_010338:2443765:2446096244609624478171722Caulobacter sp. K31, complete genomehypothetical protein2e-96353
NC_014100:2782000:2797176279717627988821707Caulobacter segnis ATCC 21756 chromosome, complete genomehypothetical protein2e-86320
NC_015381:2859000:2890870289087028928311962Burkholderia gladioli BSR3 chromosome 1, complete sequencetype IV secretory pathway VirD2 component5e-63241
NC_015556:2265940:2284506228450622864551950Pseudomonas fulva 12-X chromosome, complete genomehypothetical protein8e-62237
NC_008577:1455000:1481079148107914830521974Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein9e-51201
NC_009719:1972545:1973557197355719755421986Parvibaculum lavamentivorans DS-1 chromosome, complete genomehypothetical protein2e-50199
NC_011386:3723019:20620622632058Oligotropha carboxidovorans OM5, complete genomehypothetical protein1e-49197
NC_003295:2787371:2804432280443228064832052Ralstonia solanacearum GMI1000, complete genomeHYPOTHETICAL/UNKNOWN PROTEIN1e-46187
NC_011365:1865687:186676018667601867389630Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome6e-45181
NC_017249:3119000:312451831245183125219702Bradyrhizobium japonicum USDA 6, complete genometransposase2e-44180
NC_008752:725189:7501817501817521691989Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein8e-44177
NC_007925:3933765:3950567395056739526182052Rhodopseudomonas palustris BisB18, complete genomehypothetical protein5e-36152
NC_016027:2446806:2463166246316624652772112Gluconacetobacter xylinus NBRC 3288, complete genomehypothetical protein2e-35150
NC_006526:1976779:1998005199800519992641260Zymomonas mobilis subsp. mobilis ZM4, complete genomeVirD2 components relaxase2e-35150
NC_014910:242845:2601642601642621461983Alicycliphilus denitrificans BC chromosome, complete genomehypothetical protein2e-35150
NC_010943:1332243:1345632134563213475961965Stenotrophomonas maltophilia K279a, complete genomehypothetical protein2e-35150
NC_011992:3752867:3773366377336637753331968Acidovorax ebreus TPSY, complete genomehypothetical protein2e-35150
NC_015186:2908387:2910505291050529125502046Acidiphilium multivorum AIU301, complete genomehypothetical protein7e-34145
NC_010170:4800000:4824978482497848269391962Bordetella petrii, complete genomeprobable conjugal transfer protein VirD21e-33144
NC_014500:842493:8679708679708699371968Dickeya dadantii 3937 chromosome, complete genomeVirD2 components relaxase4e-33142
NC_010125:1538335:1552113155211315542242112Gluconacetobacter diazotrophicus PAl 5, complete genomehypothetical protein2e-32140
NC_011365:1171536:1197201119720111993122112Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomehypothetical protein1e-32140
NC_011662:2320100:235038623503862351012627Thauera sp. MZ1T, complete genome2e-31137
NC_007802:3575739:3580699358069935827832085Jannaschia sp. CCS1, complete genomehypothetical protein1e-29130
NC_012668:3037345:305165530516553052539885Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein6e-28125
NC_016445:89500:971099710997930822Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein5e-28125
NC_014006:344331:3584373584373605002064Sphingobium japonicum UT26S chromosome 1, complete genometype IV secretory pathway VirD2 component4e-28125
NC_017249:3119000:312406831240683124460393Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein4e-26119
NC_012791:2233098:2233098223309822348101713Variovorax paradoxus S110 chromosome 1, complete genomehypothetical protein6e-25115
NC_011059:670345:6729736729736749041932Prosthecochloris aestuarii DSM 271, complete genomehypothetical protein7e-2098.6
NC_010410:3606826:367497536749753675871897Acinetobacter baumannii AYE, complete genome6e-1995.5
NC_012982:711122:7261567261567280961941Hirschia baltica ATCC 49814, complete genomehypothetical protein8e-1995.1
NC_013422:1755875:1774266177426617757471482Halothiobacillus neapolitanus c2, complete genomeType IV secretory pathway VirD2 pilin (relaxase)-like protein1e-1894.7
NC_014414:2540189:2544170254417025461071938Parvularcula bermudensis HTCC2503 chromosome, complete genomehypothetical protein2e-1687
NC_015850:1242010:1255351125535112570961746Acidithiobacillus caldus SM-1 chromosome, complete genomehypothetical protein9e-1271.6
NC_011206:1264639:1279646127964612811961551Acidithiobacillus ferrooxidans ATCC 53993, complete genomeType IV secretory pathway VirD2 pilin (relaxase)-like protein1e-1067.8