Pre_GI: BLASTP Hits

Some Help

Query: NC_017249:18493:36852 Bradyrhizobium japonicum USDA 6, complete genome

Start: 36852, End: 37238, Length: 387

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004463:18497:368573685737297441Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein2e-50197
NC_014834:959986:970130970130970558429Rhodopseudomonas palustris DX-1 chromosome, complete genomehelix-turn-helix domain-containing protein8e-32135
NC_009720:4406991:443446044344604434894435Xanthobacter autotrophicus Py2, complete genomehypothetical protein9e-27118
NC_007643:955362:967217967217967687471Rhodospirillum rubrum ATCC 11170, complete genomeHelix-turn-helix protein, CopG4e-21100
NC_014100:2782000:279479527947952795211417Caulobacter segnis ATCC 21756 chromosome, complete genomehypothetical protein5e-1683.2
NC_011365:1865687:186750518675051867954450Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomehelix-turn-helix protein, CopG8e-1682.4
NC_015556:2265940:226999122699912270425435Pseudomonas fulva 12-X chromosome, complete genomeCopG/DNA-binding domain-containing protein1e-1581.6
NC_003295:2787371:279155627915562792032477Ralstonia solanacearum GMI1000, complete genomeHYPOTHETICAL/UNKNOWN PROTEIN2e-1580.9
NC_011365:1135750:115378011537801154214435Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomehypothetical protein5e-1579.7
NC_008577:1489643:149307214930721493536465Shewanella sp. ANA-3 chromosome 1, complete sequenceCopG domain protein DNA-binding domain protein8e-1579
NC_014910:242845:242845242845243291447Alicycliphilus denitrificans BC chromosome, complete genomecopg/DNA-binding domain-containing protein1e-1479
NC_010002:2933909:296865029686502969114465Delftia acidovorans SPH-1, complete genomeCopG domain protein DNA-binding domain protein1e-1478.6
NC_018691:3082000:309781930978193098283465Alcanivorax dieselolei B5 chromosome, complete genomeDNA-binding helix-turn-helix domain-containing protein1e-1478.2
NC_010943:1332243:133392913339291334375447Stenotrophomonas maltophilia K279a, complete genomehypothetical protein1e-1478.2
NC_015381:2859000:288116028811602881636477Burkholderia gladioli BSR3 chromosome 1, complete sequenceCopG family transcriptional regulator2e-1477.8
NC_011992:3752867:375703637570363757500465Acidovorax ebreus TPSY, complete genomeCopG domain protein DNA-binding domain protein2e-1477.8
NC_014910:2930860:293503529350352935499465Alicycliphilus denitrificans BC chromosome, complete genomecopg/DNA-binding domain-containing protein3e-1477.4
NC_010125:2998619:300084930008493001298450Gluconacetobacter diazotrophicus PAl 5, complete genomehypothetical protein2e-1271.2
NC_010338:2443765:245234224523422452758417Caulobacter sp. K31, complete genomehypothetical protein7e-1269.3
NC_007925:3933765:394633439463343946798465Rhodopseudomonas palustris BisB18, complete genomeCopG-like DNA-binding1e-1168.6
NC_010170:4800000:487873948787394879242504Bordetella petrii, complete genomeputative DNA-binding protein5e-1166.6
NC_012982:711122:713618713618713986369Hirschia baltica ATCC 49814, complete genomehypothetical protein6e-0959.3
NC_009719:1972545:198632419863241986743420Parvibaculum lavamentivorans DS-1 chromosome, complete genomeCopG/DNA-binding domain-containing protein3e-0650.4