Pre_GI: BLASTP Hits

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Query: NC_017249:18493:34574 Bradyrhizobium japonicum USDA 6, complete genome

Start: 34574, End: 34855, Length: 282

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004463:18497:345793457934860282Bradyrhizobium japonicum USDA 110, complete genomeprobable transcriptional regulator2e-47187
NC_012808:4137000:413802541380254138288264Methylobacterium extorquens AM1, complete genomehypothetical protein6e-1579.7
NC_015590:145353:152549152549152821273Sinorhizobium meliloti AK83 chromosome 1, complete sequencehelix-turn-helix domain-containing protein7e-1579.3
NC_003047:536151:546632546632546901270Sinorhizobium meliloti 1021, complete genomeHYPOTHETICAL TRANSCRIPTION REGULATOR PROTEIN3e-1477.4
NC_012808:58701:745447454474837294Methylobacterium extorquens AM1, complete genomeTranscriptional regulator, XRE family5e-1476.3
NC_009667:1371924:137862013786201378910291Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequenceXRE family transcriptional regulator6e-1476.3
NC_009667:1934818:194392819439281944158231Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequenceXRE family transcriptional regulator3e-1167.4
NC_014618:1103239:112464711246471124898252Enterobacter cloacae SCF1 chromosome, complete genomehelix-turn-helix domain-containing protein4e-1063.5
NC_015186:2908387:292159829215982921819222Acidiphilium multivorum AIU301, complete genomeXre family transcriptional regulator1e-0962
NC_009720:622262:650729650729650977249Xanthobacter autotrophicus Py2, complete genomeXRE family transcriptional regulator1e-0962
NC_014311:3076519:311203031120303112257228Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein3e-0960.5
NC_008358:2638245:269643226964322696641210Hyphomonas neptunium ATCC 15444, complete genomeDNA-binding protein4e-0960.1
NC_010943:1332243:135334013533401353636297Stenotrophomonas maltophilia K279a, complete genomeputative HTH transcriptional regulator5e-0959.7
NC_011667:1:118811881436249Thauera sp. MZ1T plasmid pTha01, complete sequencehelix-turn-helix domain protein5e-0959.7
NC_014500:894136:905379905379905648270Dickeya dadantii 3937 chromosome, complete genomeMunI regulatory protein1e-0858.5
NC_014311:1507945:151246115124611512742282Ralstonia solanacearum PSI07 chromosome, complete genomeHTH-type transcriptional regulator1e-0858.5
NC_010120:1065833:107078010707801071133354Neisseria meningitidis 053442, complete genometranscriptional regulator1e-0858.5
NC_012912:1053618:106326310632631063553291Dickeya zeae Ech1591, complete genometranscriptional regulator, XRE family1e-0858.2
NC_004347:4007847:401423640142364014463228Shewanella oneidensis MR-1, complete genometranscriptional regulator, Cro/CI family2e-0857.8
NC_013446:1648556:169582916958291696128300Comamonas testosteroni CNB-2, complete genometranscriptional regulator, XRE family2e-0857.8
NC_014500:1862000:190350619035061903814309Dickeya dadantii 3937 chromosome, complete genomeMunI regulatory protein3e-0857.4
NC_014500:894136:905690905690905920231Dickeya dadantii 3937 chromosome, complete genomeMunI regulatory protein3e-0857.4
NC_013739:717352:741950741950742222273Conexibacter woesei DSM 14684, complete genometranscriptional regulator, XRE family3e-0857
NC_006569:69939:809618096181179219Silicibacter pomeroyi DSS-3 megaplasmid, complete sequenceDNA-binding protein, putative4e-0857
NC_014217:2987450:299692129969212997139219Starkeya novella DSM 506 chromosome, complete genometranscriptional regulator, XRE family4e-0857
NC_007651:3560652:357327135732713573513243Burkholderia thailandensis E264 chromosome I, complete sequenceDNA-binding protein5e-0856.6
NC_010170:4463000:447427744742774474561285Bordetella petrii, complete genomeconserved hypothetical protein, DNA-binding5e-0856.6
NC_008686:95326:116687116687116923237Paracoccus denitrificans PD1222 chromosome 1, complete sequencetranscriptional regulator, XRE family4e-0856.6
NC_013421:478586:490944490944491180237Pectobacterium wasabiae WPP163, complete genometranscriptional regulator, XRE family7e-0855.8
NC_014618:1103239:112495011249501125180231Enterobacter cloacae SCF1 chromosome, complete genomehelix-turn-helix domain-containing protein1e-0755.5
NC_008542:197500:220256220256220585330Burkholderia cenocepacia HI2424 chromosome 1, complete sequencetranscriptional regulator, XRE family1e-0755.5
NC_012792:627500:637235637235637438204Variovorax paradoxus S110 chromosome 2, complete genometranscriptional regulator, XRE family1e-0755.5
NC_018867:10238:195531955319765213Dehalobacter sp. CF chromosome, complete genomeRegulatory protein C.BcnI1e-0755.1
NC_007651:72952:124305124305124691387Burkholderia thailandensis E264 chromosome I, complete sequencepossible transcriptional regulator, XRE family1e-0755.1
NC_008321:3815940:382182538218253822061237Shewanella sp. MR-4, complete genometranscriptional regulator, XRE family1e-0755.1
NC_007626:506532:513201513201513431231Magnetospirillum magneticum AMB-1, complete genomePredicted transcriptional regulator2e-0754.7
NC_010725:4035397:407959340795934079832240Methylobacterium populi BJ001, complete genometranscriptional regulator, XRE family2e-0754.7
NC_010338:4481356:448954444895444489780237Caulobacter sp. K31, complete genometranscriptional regulator, XRE family2e-0754.3
NC_009253:897684:951074951074951394321Desulfotomaculum reducens MI-1 chromosome, complete genomeXRE family transcriptional regulator2e-0754.3
NC_014216:2860342:286928428692842869517234Desulfurivibrio alkaliphilus AHT2 chromosome, complete genometranscriptional regulator, XRE family2e-0754.3
NC_007964:2762000:277306427730642773324261Nitrobacter hamburgensis X14, complete genometranscriptional regulator, XRE family3e-0753.9
NC_010170:2246993:226460422646042264897294Bordetella petrii, complete genomepredicted transcriptional regulator3e-0753.9
NC_013890:103807:108816108816109031216Dehalococcoides sp. GT chromosome, complete genometranscriptional regulator, XRE family3e-0753.9
NC_009455:273519:308492308492308707216Dehalococcoides sp. BAV1 chromosome, complete genomeXRE family transcriptional regulator3e-0753.9
NC_013739:2106662:211189521118952112176282Conexibacter woesei DSM 14684, complete genometranscriptional regulator, XRE family4e-0753.5
NC_007509:3668:235972359723938342Burkholderia sp. 383 chromosome 3, complete sequencetranscriptional regulator, XRE family4e-0753.5
NC_016641:1530905:154211415421141542458345Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional regulator sinR6e-0753.1
NC_016002:1975000:200038420003842000629246Pseudogulbenkiania sp. NH8B, complete genomeputative transcriptional regulator6e-0752.8
NC_009495:2479465:252113325211332521384252Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeDNA-binding phage protein6e-0752.8
NC_012034:2555447:257888725788872579120234Anaerocellum thermophilum DSM 6725, complete genometranscriptional regulator, XRE family8e-0752.4
NC_013204:2234860:225284522528452253081237Eggerthella lenta DSM 2243, complete genometranscriptional regulator, XRE family8e-0752.4
NC_010170:4463000:448078044807804481085306Bordetella petrii, complete genomepredicted transcriptional regulator9e-0752.4
NC_010002:4572573:461371146137114614031321Delftia acidovorans SPH-1, complete genometranscriptional regulator, XRE family9e-0752.4
NC_011773:1277606:130510913051091305432324Bacillus cereus AH820 chromosome, complete genometranscriptional regulator SinR1e-0652
NC_011004:2457778:247260524726052472874270Rhodopseudomonas palustris TIE-1, complete genometranscriptional regulator, XRE family2e-0651.6
NC_010511:4313769:431880843188084319359552Methylobacterium sp. 4-46 chromosome, complete genomeXRE family transcriptional regulator1e-0651.6
NC_016791:3953972:395870839587083958935228Clostridium sp. BNL1100 chromosome, complete genomeputative transcriptional regulator1e-0651.6
NC_016002:1975000:199208019920801992325246Pseudogulbenkiania sp. NH8B, complete genomeXRE family transcriptional regulator1e-0651.6
NC_020134:1328302:133670913367091337281573Clostridium stercorarium subsp. stercorarium DSM 8532, completeputative cytosolic protein2e-0651.2
NC_009659:1050532:111355311135531113789237Janthinobacterium sp. Marseille chromosome, complete genomesubunit S of type I restriction-modification system2e-0651.2
NC_018868:619113:654559654559654795237Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeCro/CI family transcriptional regulator3e-0650.8
NC_013739:5535945:555957955595795559845267Conexibacter woesei DSM 14684, complete genometranscriptional regulator, XRE family3e-0650.8
NC_020260:440000:450272450272450733462Cronobacter sakazakii Sp291, complete genomeXRE family transcriptional regulator3e-0650.8
NC_012108:946314:962372962372962944573Desulfobacterium autotrophicum HRM2, complete genometranscriptional regulator (Cro/CI family protein)3e-0650.4
NC_010546:4923496:1108711087121721086Cyanothece sp. ATCC 51142 chromosome circular, complete sequencehypothetical protein3e-0650.4
NC_010424:697187:744858744858745595738Candidatus Desulforudis audaxviator MP104C, complete genomeputative prophage repressor4e-0650.1
NC_002678:4618555:464247446424744642701228Mesorhizobium loti MAFF303099, complete genometranscriptional regulatory protein4e-0650.1
NC_013739:717352:726063726063726323261Conexibacter woesei DSM 14684, complete genometranscriptional regulator, XRE family5e-0650.1
NC_009718:1411793:143010814301081430635528Fervidobacterium nodosum Rt17-B1, complete genomecupin 2 domain-containing protein8e-0649.3
NC_010617:774914:806803806803807018216Kocuria rhizophila DC2201, complete genomeXre family DNA-binding protein8e-0649.3
NC_011979:773673:785967785967786287321Geobacter sp. FRC-32, complete genometranscriptional regulator, XRE family8e-0649.3
NC_012918:928903:955145955145955465321Geobacter sp. M21 chromosome, complete genomeXRE family transcriptional regulator9e-0648.9
NC_021182:554000:556374556374557291918Clostridium pasteurianum BC1, complete genomeSOS response transcriptional repressor, RecA-mediated autopeptidase9e-0648.9