Pre_GI: BLASTP Hits

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Query: NC_017249:1476500:1486887 Bradyrhizobium japonicum USDA 6, complete genome

Start: 1486887, End: 1487303, Length: 417

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020453:1785473:179139217913921791775384Agromonas oligotrophica S58 DNA, complete genomeresponse regulator receiver domain-containing protein4e-28123
NC_010172:3712000:372749337274933727873381Methylobacterium extorquens PA1, complete genomeresponse regulator receiver3e-26117
NC_020453:1785473:1792687179268717938231137Agromonas oligotrophica S58 DNA, complete genomesignal transduction histidine kinase1e-24111
NC_010511:7024412:705057470505747050954381Methylobacterium sp. 4-46 chromosome, complete genomeresponse regulator receiver protein3e-24110
NC_017249:3181976:318796131879613188287327Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein4e-22103
NC_012988:4075429:409341640934164093715300Methylobacterium extorquens DM4, complete genome2e-2097.4
NC_014640:4532095:453331345333134533702390Achromobacter xylosoxidans A8 chromosome, complete genomeresponse regulator 121e-1788.6
NC_007761:3047321:305125730512573051790534Rhizobium etli CFN 42, complete genomeprobable two-component response regulator protein2e-1684.3
NC_010505:3376322:3394677339467733967672091Methylobacterium radiotolerans JCM 2831, complete genomePAS/PAC sensor hybrid histidine kinase2e-1581.3
NC_010322:3315024:334008633400863340448363Pseudomonas putida GB-1 chromosome, complete genomeresponse regulator receiver protein3e-1477.4
NC_010505:2657683:266680126668012667211411Methylobacterium radiotolerans JCM 2831, complete genomeresponse regulator receiver protein2e-1374.3
NC_017249:4365935:4380207438020743825702364Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein1e-1272
NC_011757:39881:4793747937503692433Methylobacterium chloromethanicum CM4, complete genomePAS/PAC sensor hybrid histidine kinase1e-1271.6
NC_003919:3812778:385602138560213856389369Xanthomonas axonopodis pv. citri str. 306, complete genomesingle-domain response regulator2e-1270.9
NC_010634:4463727:4467399446739944699542556Yersinia pseudotuberculosis PB1/+, complete genomemulti-sensor hybrid histidine kinase5e-1269.7
NC_011757:4293000:431211443121144312599486Methylobacterium chloromethanicum CM4, complete genomeresponse regulator receiver protein1e-1168.9
NC_007606:3842708:3859899385989938621632265Shigella dysenteriae Sd197, complete genomeputative histidine kinase1e-1168.6
NC_013008:5196080:5197714519771451999842271Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehistidine kinase2e-1167.8
NC_011353:5240020:5241654524165452439242271Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein2e-1167.8
NC_002695:5164819:5166453516645351687232271Escherichia coli O157:H7 str. Sakai, complete genomeputative histidine protein kinase2e-1167.8
NC_002655:5194804:5196438519643851987082271Escherichia coli O157:H7 EDL933, complete genomeputative histidine kinase2e-1167.8
NC_013941:5013695:5015233501523350175902358Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeIntegral membrane sensor hybrid histidine kinase2e-1167.8
NC_010725:4035397:4040090404009040425132424Methylobacterium populi BJ001, complete genomemulti-sensor hybrid histidine kinase2e-1167.4
NC_011894:6259649:6272210627221062742312022Methylobacterium nodulans ORS 2060, complete genomePAS/PAC sensor hybrid histidine kinase3e-1167.4
NC_007951:2045830:2054351205435120567202370Burkholderia xenovorans LB400 chromosome 1, complete sequencePAS/PAC Sensor Hybrid Histidine Kinase2e-1064.3
NC_010172:798923:8172928172928189051614Methylobacterium extorquens PA1, complete genomeATP-binding region ATPase domain protein2e-1064.3
NC_013223:1090397:1100795110079511030052211Desulfohalobium retbaense DSM 5692, complete genomePAS/PAC sensor hybrid histidine kinase2e-1064.3
NC_020209:2838582:2838582283858228424063825Pseudomonas poae RE*1-1-14, complete genomesensor histidine kinase3e-1063.9
NC_011757:4293000:4334529433452943362501722Methylobacterium chloromethanicum CM4, complete genomePAS/PAC sensor hybrid histidine kinase3e-1063.5
NC_014924:2399524:2397876239787623995371662Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomehistidine kinase7e-1062.8
NC_016626:1699500:1709507170950717110331527Burkholderia sp. YI23 plasmid byi_1p, complete sequencePAS/PAC sensor hybrid histidine kinase1e-0962
NC_011146:3426500:3428824342882434314332610Geobacter bemidjiensis Bem, complete genomemulti-sensor hybrid histidine kinase2e-0961.6
NC_015740:3678342:371320437132043713704501Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein2e-0961.2
NC_012988:1817000:1843203184320318447081506Methylobacterium extorquens DM4, complete genomehybrid histidine kinase2e-0960.8
NC_012918:1444333:1471010147101014736192610Geobacter sp. M21 chromosome, complete genomePAS/PAC sensor hybrid histidine kinase2e-0960.8
NC_012660:5571500:558993655899365590346411Pseudomonas fluorescens SBW25 chromosome, complete genomeputative two-component system response regulator3e-0960.8
NC_007912:2768363:2786848278684827883411494Saccharophagus degradans 2-40, complete genomediguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)3e-0960.5
NC_012988:4633930:463700246370024637391390Methylobacterium extorquens DM4, complete genomeresponse regulator3e-0960.5
NC_010172:4185904:419029441902944190683390Methylobacterium extorquens PA1, complete genomeresponse regulator receiver3e-0960.5
NC_011757:4293000:429384442938444294233390Methylobacterium chloromethanicum CM4, complete genomeresponse regulator receiver protein3e-0960.5
NC_011894:3623500:3624775362477536267631989Methylobacterium nodulans ORS 2060, complete genomePAS/PAC sensor hybrid histidine kinase6e-0959.7
NC_014355:2210884:2230879223087922322971419Candidatus Nitrospira defluvii, complete genomesigma-54 dependent response regulator FleR6e-0959.3
NC_014844:2828370:2846565284656528477011137Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeresponse regulator receiver6e-0959.3
NC_011757:3486283:3521250352125035240782829Methylobacterium chloromethanicum CM4, complete genomePAS/PAC sensor hybrid histidine kinase8e-0958.9
NC_017249:7917586:7926765792676579284471683Bradyrhizobium japonicum USDA 6, complete genometwo-component hybrid sensor and regulator1e-0858.9
NC_011757:5048714:5074765507476550768222058Methylobacterium chloromethanicum CM4, complete genomehistidine kinase1e-0858.5
NC_012808:4235567:423864042386404239029390Methylobacterium extorquens AM1, complete genomeputative response regulator; (CheY-like protein)1e-0858.5
NC_012225:569590:579548579548579916369Brachyspira hyodysenteriae WA1, complete genomechemotaxis response regulator CheY2e-0858.2
NC_017243:1698000:170772417077241708092369Brachyspira intermedia PWS/A chromosome, complete genomechemotaxis response regulator CheY2e-0858.2
NC_004463:2344128:2353736235373623554181683Bradyrhizobium japonicum USDA 110, complete genometwo-component hybrid sensor and regulator2e-0857.8
NC_011894:6708970:6710443671044367124251983Methylobacterium nodulans ORS 2060, complete genomePAS/PAC sensor hybrid histidine kinase2e-0857.8
NC_011757:517000:5364535364535397223270Methylobacterium chloromethanicum CM4, complete genomemulti-sensor hybrid histidine kinase2e-0857.8
NC_015376:3249773:3264864326486432672962433Burkholderia gladioli BSR3 chromosome chromosome 2, completesensory box sensor histidine kinase/response regulator2e-0857.8
NC_020209:1903830:1920733192073319224031671Pseudomonas poae RE*1-1-14, complete genomeputative two-component sensor histidine kinase2e-0857.4
NC_011757:3540992:3552751355275135544931743Methylobacterium chloromethanicum CM4, complete genomehistidine kinase3e-0857.4
NC_010505:5525461:5540340554034055425082169Methylobacterium radiotolerans JCM 2831, complete genomeintegral membrane sensor hybrid histidine kinase3e-0857.4
NC_010511:3160123:3164569316456931677423174Methylobacterium sp. 4-46 chromosome, complete genomePAS/PAC sensor hybrid histidine kinase4e-0857
NC_012988:4075429:4091338409133840933351998Methylobacterium extorquens DM4, complete genomesensor hybrid histidine kinase with multiple PAS and response regulator receiver domains4e-0856.6
NC_017249:2073558:2073998207399820757671770Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein5e-0856.2
NC_016010:1822212:189990018999001900274375Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeresponse regulator5e-0856.2
NC_016010:1822212:1896930189693018997852856Xanthomonas axonopodis pv. citrumelo F1 chromosome, completesensory box histidine kinase/response regulator hybrid6e-0856.2
NC_007626:3522265:3595421359542135977692349Magnetospirillum magneticum AMB-1, complete genomeSignal transduction histidine kinase9e-0855.8
NC_011146:482440:5050885050885079552868Geobacter bemidjiensis Bem, complete genomemulti-sensor hybrid histidine kinase8e-0855.8
NC_014330:505412:518494518494518862369Brachyspira pilosicoli 95/1000 chromosome, complete genomechemotaxis response regulator CheY8e-0855.8
NC_018607:921923:946184946184946552369Brachyspira pilosicoli B2904 chromosome, complete genomechemotaxis response regulator CheY8e-0855.8
NC_019908:121178:145904145904146272369Brachyspira pilosicoli P43/6/78 chromosome, complete genomechemotaxis response regulator CheY8e-0855.8
NC_018604:1943561:195231119523111952679369Brachyspira pilosicoli WesB complete genomechemotaxis response regulator CheY8e-0855.8
NC_010505:5525461:5554984555498455578242841Methylobacterium radiotolerans JCM 2831, complete genomemulti-sensor hybrid histidine kinase1e-0755.5
NC_012881:4097552:4118624411862441200151392Desulfovibrio salexigens DSM 2638, complete genometwo component, sigma54 specific, transcriptional regulator, Fis family1e-0755.5
NC_009439:3104000:3104096310409631055081413Pseudomonas mendocina ymp, complete genometwo component, sigma54 specific, Fis family transcriptional regulator1e-0755.5
NC_009485:7021228:704724970472497047653405Bradyrhizobium sp. BTAi1 chromosome, complete genometwo-component response regulator1e-0755.5
NC_012808:3711806:3728812372881237304761665Methylobacterium extorquens AM1, complete genome1e-0755.1
NC_007484:130896:1332091332091384855277Nitrosococcus oceani ATCC 19707, complete genomeCheA signal transduction histidine kinase1e-0755.1
NC_010511:5169338:5182175518217551842262052Methylobacterium sp. 4-46 chromosome, complete genomePAS/PAC sensor hybrid histidine kinase2e-0754.7
NC_010172:3712000:3725376372537637274122037Methylobacterium extorquens PA1, complete genomePAS sensor protein2e-0754.7
NC_010322:3315024:334099633409963341412417Pseudomonas putida GB-1 chromosome, complete genomeresponse regulator receiver protein2e-0754.7
NC_013946:879199:8932778932778960122736Meiothermus ruber DSM 1279 chromosome, complete genomeCheA signal transduction histidine kinase2e-0754.7
NC_011757:5742290:5768649576864957713212673Methylobacterium chloromethanicum CM4, complete genomemulti-sensor hybrid histidine kinase2e-0754.3
NC_007517:1561466:1565515156551515668911377Geobacter metallireducens GS-15, complete genometwo component, sigma54 specific, transcriptional regulator, Fis family2e-0754.3
NC_010814:1390817:1412795141279514141831389Geobacter lovleyi SZ, complete genometwo component, sigma54 specific, transcriptional regulator, Fis family3e-0753.9
NC_008340:2272692:2284341228434122857951455Alkalilimnicola ehrlichei MLHE-1, complete genometwo component, sigma54 specific, transcriptional regulator, Fis family3e-0753.9
NC_016815:844350:8461738461738475161344Sinorhizobium fredii HH103 plasmid pSfHH103e complete sequencetwo component, sigma54 specific, transcriptional regulator, Fis family3e-0753.9
NC_012881:4097552:4103347410334741057222376Desulfovibrio salexigens DSM 2638, complete genomePAS/PAC sensor hybrid histidine kinase3e-0753.5
NC_014614:284005:287079287079287765687Clostridium sticklandii, complete genomeDNA-binding response regulator4e-0753.5
NC_009512:2238437:226216822621682262518351Pseudomonas putida F1, complete genomeresponse regulator receiver protein4e-0753.5
NC_015945:218326:2202842202842216121329Muricauda ruestringensis DSM 13258 chromosome, complete genometwo component sigma-54 specific Fis family transcriptional regulator4e-0753.5
NC_003911:253400:271676271676272377702Silicibacter pomeroyi DSS-3, complete genomeDNA-binding response regulator PetR4e-0753.5
NC_008705:3201817:321045032104503211082633Mycobacterium sp. KMS, complete genomeresponse regulator receiver and ANTAR domain protein6e-0753.1
NC_011071:1178423:1178423117842311804922070Stenotrophomonas maltophilia R551-3, complete genomePAS/PAC sensor hybrid histidine kinase5e-0753.1
NC_014355:3248386:3246938324693832483891452Candidatus Nitrospira defluvii, complete genomesigma-54 dependent transcriptional regulator4e-0753.1
NC_012811:959725:973030973030973848819Methylobacterium extorquens AM1 megaplasmid, complete sequencehypothetical protein4e-0753.1
NC_015185:875324:8855678855678868921326Desulfurobacterium thermolithotrophum DSM 11699 chromosome,two component, sigma54 specific, transcriptional regulator, Fis family6e-0752.8
NC_008278:5012000:501680750168075017406600Frankia alni ACN14a, complete genomeTwo-component system transcriptional regulator.6e-0752.8
NC_009445:1453132:145313214531321453536405Bradyrhizobium sp. ORS 278 chromosome, complete genometwo-component response regulator8e-0752.4
NC_010622:249625:2517062517062530641359Burkholderia phymatum STM815 chromosome 1, complete sequencetwo component, sigma54 specific, transcriptional regulator, Fis family8e-0752.4
NC_002939:1634843:1640718164071816420941377Geobacter sulfurreducens PCA, complete genomesigma-54 dependent DNA-binding response regulator1e-0652
NC_014844:2056943:207194420719442072312369Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeresponse regulator receiver1e-0652
NC_007517:2241104:2277374227737422787231350Geobacter metallireducens GS-15, complete genometwo component, sigma54 specific, transcriptional regulator, Fis family1e-0652
NC_015850:1497998:1520348152034815216911344Acidithiobacillus caldus SM-1 chromosome, complete genometwo component sigma-54 specific Fis family transcriptional regulator1e-0651.6
NC_014315:114151:1179431179431232315289Nitrosococcus watsoni C-113 chromosome, complete genomeCheA signal transduction histidine kinase1e-0651.6
NC_017096:779550:7851687851687865801413Caldisericum exile AZM16c01, complete genomeNtrC family two-component system response regulator1e-0651.6
NC_015656:2484749:251097625109762511590615Frankia symbiont of Datisca glomerata chromosome, complete genomeresponse regulator receiver and ANTAR domain-containing protein2e-0651.6
NC_003869:1643682:1669838166983816708421005Thermoanaerobacter tengcongensis MB4, complete genomeResponse regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain2e-0651.6
NC_016843:547149:5611735611735625491377Treponema pallidum subsp. pertenue str. Gauthier chromosome,sigma-54 dependent response regulator2e-0651.2
NC_016842:546661:5606855606855620611377Treponema pallidum subsp. pertenue str. SamoaD chromosome, completesigma-54 dependent response regulator2e-0651.2
NC_000919:545141:5591655591655605411377Treponema pallidum subsp. pallidum str. Nichols, complete genomeresponse regulatory protein (atoC)2e-0651.2
NC_010741:546573:5605975605975619731377Treponema pallidum subsp. pallidum SS14, complete genomeresponse regulatory protein2e-0651.2
NC_012660:5571500:559795255979525598320369Pseudomonas fluorescens SBW25 chromosome, complete genomeputative chemotaxis two-component system response regulator2e-0651.2
NC_016844:547069:5610935610935624691377Treponema pallidum subsp. pallidum DAL-1 chromosome, completesigma-54 dependent response regulator2e-0651.2
NC_016848:547115:5611395611395625151377Treponema pallidum subsp. pertenue str. CDC2 chromosome, completesigma-54 dependent response regulator2e-0651.2
NC_004578:3241618:3258416325841632600201605Pseudomonas syringae pv. tomato str. DC3000, complete genomesensory box histidine kinase/response regulator2e-0651.2
NC_004129:5373886:545217354521735452583411Pseudomonas fluorescens Pf-5, complete genomeresponse regulator2e-0651.2
NC_015714:542679:5567085567085580841377Treponema paraluiscuniculi Cuniculi A chromosome, complete genomesigma-54 dependent response regulator2e-0651.2
NC_021508:546592:5606165606165619921377Treponema pallidum subsp. pallidum SS14, complete genomesigma-54 dependent response regulator2e-0651.2
NC_017268:546376:5604005604005617761377Treponema pallidum subsp. pallidum str. Chicago chromosome,acetoacetate metabolism regulatory protein AtoC2e-0651.2
NC_008554:2308500:2324965232496523268241860Syntrophobacter fumaroxidans MPOB, complete genomeintegral membrane sensor hybrid histidine kinase2e-0650.8
NC_014158:2561441:257668325766832577300618Tsukamurella paurometabola DSM 20162 chromosome, complete genomeresponse regulator receiver and ANTAR domain protein3e-0650.8
NC_014006:611592:6125216125216145842064Sphingobium japonicum UT26S chromosome 1, complete genomesignal transduction histidine kinase3e-0650.8
NC_011296:1086223:1086223108622310875631341Thermodesulfovibrio yellowstonii DSM 11347, complete genomeacetoacetate metabolism regulatory protein AtoC3e-0650.4
NC_005070:2133380:214635021463502147096747Synechococcus sp. WH 8102, complete genometwo-component response regulator3e-0650.4
NC_005773:951744:951744951744952112369Pseudomonas syringae pv. phaseolicola 1448A, complete genomechemotaxis protein CheY3e-0650.4
NC_011979:1683964:1687718168771816890821365Geobacter sp. FRC-32, complete genometwo component, sigma54 specific, transcriptional regulator, Fis family4e-0650.1
NC_020209:1903830:191001719100171910394378Pseudomonas poae RE*1-1-14, complete genomeresponse regulator4e-0650.1
NC_004113:1026886:1048486104848610511012616Thermosynechococcus elongatus BP-1, complete genometwo-component hybrid sensor & regulator4e-0650.1
NC_007413:2312735:233057223305722331300729Anabaena variabilis ATCC 29413, complete genomeTwo component Transcriptional regulator, Winged helix family4e-0650.1
NC_013929:7606749:762775876277587628411654Streptomyces scabiei 87.22 chromosome, complete genometwo-component system response regulator9e-0648.9
NC_012918:1660477:1683690168369016861222433Geobacter sp. M21 chromosome, complete genomePAS/PAC sensor hybrid histidine kinase9e-0648.9
NC_014924:2517068:2518503251850325204191917Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomePAS/PAC sensor hybrid histidine kinase1e-0548.9