Pre_GI: BLASTN Hits

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Query: NC_017223:3608749 Bordetella pertussis CS chromosome, complete genome

Start: 3608749, End: 3635417, Length: 26669

Host Lineage: Bordetella pertussis; Bordetella; Alcaligenaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This group of organisms is capable of invading the respiratory tract of animals and causing severe diseases. They express a number of virulence factors in order to do this including filamentous hemagglutins for attachment, cytotoxins, and proteins that form a type III secretion system for transport of effector molecules into host cells. This organism, which is unable to persist in the environment, is a strict human pathogen that causes whooping cough. Once a common cause of death in children the development of a vaccine has greatly decreased the number of deaths due to Bordetella pertussis. However, this organism infects and estimated 39 million people and kills hundreds of thousands of people each year.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002929:3568106*3568106359523227127Bordetella pertussis Tohama I, complete genome049880BLASTN svgBLASTP svg
NC_002927:23385492338549238749248944Bordetella bronchiseptica RB50, complete genome012440BLASTN svgBLASTP svg
NC_002927:37168943716894377039253499Bordetella bronchiseptica RB50, complete genome09416BLASTN svgBLASTP svg
NC_002929:52500*525008147528976Bordetella pertussis Tohama I, complete genome02056BLASTN svgBLASTP svg
NC_002929:3305682*3305682333485129170Bordetella pertussis Tohama I, complete genome02048BLASTN svgBLASTP svg
NC_002929:2589202*2589202261209922898Bordetella pertussis Tohama I, complete genome02032BLASTN svgBLASTP svg
NC_010682:70191270191272480022889Ralstonia pickettii 12J chromosome 1, complete sequence4e-55224BLASTN svgBLASTP svg
NC_014910:966761*96676199256725807Alicycliphilus denitrificans BC chromosome, complete genome8e-47196BLASTN svgBLASTP svg
NC_002516:1031386*1031386109196460579Pseudomonas aeruginosa PAO1, complete genome3e-46194BLASTN svgBLASTP svg
NC_015422:910292*91029293677826487Alicycliphilus denitrificans K601 chromosome, complete genome2e-44188BLASTN svgBLASTP svg
NC_010804:450130*45013047811127982Burkholderia multivorans ATCC 17616 chromosome 1, complete3e-43184BLASTN svgBLASTP svg
NC_014532:1481787*1481787151013928353Halomonas elongata DSM 2581, complete genome3e-37165BLASTN svgBLASTP svg
NC_012856:737170*73717079740260233Ralstonia pickettii 12D chromosome 1, complete genome5e-36161BLASTN svgBLASTP svg
NC_008060:34185134185136409922249Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence4e-33151BLASTN svgBLASTP svg
NC_010645:15238671523867154936425498Bordetella avium 197N, complete genome1e-30143BLASTN svgBLASTP svg
NC_010645:406794*40679445127044477Bordetella avium 197N, complete genome2e-26129BLASTN svgBLASTP svg
NC_007973:2888824*2888824291938730564Ralstonia metallidurans CH34 chromosome 1, complete sequence6e-23117BLASTN svgBLASTP svg
NC_008786:2687688*2687688271388926202Verminephrobacter eiseniae EF01-2, complete genome1e-20109BLASTN svgBLASTP svg
NC_008781:30564073056407308270026294Polaromonas naphthalenivorans CJ2, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_004129:5481629*5481629550572324095Pseudomonas fluorescens Pf-5, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_020211:4168189*4168189419217623988Serratia marcescens WW4, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_014973:3290545*3290545331870328159Geobacter sp. M18 chromosome, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_014924:72538072538075060925230Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_012779:610509*61050963687526367Edwardsiella ictaluri 93-146, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010682:3313944*3313944336341949476Ralstonia pickettii 12J chromosome 1, complete sequence2e-1385.7BLASTN svgBLASTP svg
NC_008061:21068482106848213789431047Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence3e-1281.8BLASTN svgBLASTP svg
NC_008543:12767512767515311825444Burkholderia cenocepacia HI2424 chromosome 2, complete sequence3e-1281.8BLASTN svgBLASTP svg
NC_010515:26910002691000272570834709Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence3e-1281.8BLASTN svgBLASTP svg
NC_014217:80040680040682559925194Starkeya novella DSM 506 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008463:4566976*4566976460307636101Pseudomonas aeruginosa UCBPP-PA14, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012856:3000839*3000839302487724039Ralstonia pickettii 12D chromosome 1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015566:4205854*4205854422474018887Serratia sp. AS12 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010002:35479583547958356621218255Delftia acidovorans SPH-1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_002927:5327094*5327094535399926906Bordetella bronchiseptica RB50, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011770:4763506*4763506478993126426Pseudomonas aeruginosa LESB58, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_009092:3057319*3057319308409726779Shewanella loihica PV-4, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004578:4465247*4465247448346018214Pseudomonas syringae pv. tomato str. DC3000, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015563:3979500*3979500400273623237Delftia sp. Cs1-4 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_008340:27722327722330180624584Alkalilimnicola ehrlichei MLHE-1, complete genome3e-0661.9BLASTN svgBLASTP svg