Pre_GI: BLASTN Hits

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Query: NC_017223:2618535 Bordetella pertussis CS chromosome, complete genome

Start: 2618535, End: 2638685, Length: 20151

Host Lineage: Bordetella pertussis; Bordetella; Alcaligenaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This group of organisms is capable of invading the respiratory tract of animals and causing severe diseases. They express a number of virulence factors in order to do this including filamentous hemagglutins for attachment, cytotoxins, and proteins that form a type III secretion system for transport of effector molecules into host cells. This organism, which is unable to persist in the environment, is a strict human pathogen that causes whooping cough. Once a common cause of death in children the development of a vaccine has greatly decreased the number of deaths due to Bordetella pertussis. However, this organism infects and estimated 39 million people and kills hundreds of thousands of people each year.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002929:2589202*2589202261209922898Bordetella pertussis Tohama I, complete genome031990BLASTN svgBLASTP svg
NC_002927:4130697*4130697415192921233Bordetella bronchiseptica RB50, complete genome029670BLASTN svgBLASTP svg
NC_002928:3715492*3715492373400118510Bordetella parapertussis 12822, complete genome025840BLASTN svgBLASTP svg
NC_002929:52500*525008147528976Bordetella pertussis Tohama I, complete genome01996BLASTN svgBLASTP svg
NC_002929:3305682*3305682333485129170Bordetella pertussis Tohama I, complete genome01996BLASTN svgBLASTP svg
NC_002929:3568106*3568106359523227127Bordetella pertussis Tohama I, complete genome01980BLASTN svgBLASTP svg
NC_014931:5088125*5088125512272134597Variovorax paradoxus EPS chromosome, complete genome2e-81311BLASTN svgBLASTP svg
NC_008781:3508784*3508784353338924606Polaromonas naphthalenivorans CJ2, complete genome1e-69272BLASTN svgBLASTP svg
NC_015138:4205986*4205986423312827143Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete2e-68268BLASTN svgBLASTP svg
NC_015422:1116359*1116359114310426746Alicycliphilus denitrificans K601 chromosome, complete genome1e-60242BLASTN svgBLASTP svg
NC_010943:20911992091199211510023902Stenotrophomonas maltophilia K279a, complete genome7e-53216BLASTN svgBLASTP svg
NC_011071:18775001877500190261425115Stenotrophomonas maltophilia R551-3, complete genome2e-50208BLASTN svgBLASTP svg
NC_013446:4281250*4281250430762526376Comamonas testosteroni CNB-2, complete genome6e-47196BLASTN svgBLASTP svg
NC_015856:3170771*3170771319449023720Collimonas fungivorans Ter331 chromosome, complete genome1e-45192BLASTN svgBLASTP svg
NC_016002:1326500*1326500135490028401Pseudogulbenkiania sp. NH8B, complete genome1e-38168BLASTN svgBLASTP svg
NC_009074:2914053*2914053293925825206Burkholderia pseudomallei 668 chromosome I, complete sequence3e-27131BLASTN svgBLASTP svg
NC_003295:2507850*2507850254415436305Ralstonia solanacearum GMI1000, complete genome5e-26127BLASTN svgBLASTP svg
NC_016010:1822212*1822212190411881907Xanthomonas axonopodis pv. citrumelo F1 chromosome, complete2e-22115BLASTN svgBLASTP svg
NC_003902:1858349*1858349191581657468Xanthomonas campestris pv. campestris str. ATCC 33913, complete1e-20109BLASTN svgBLASTP svg
NC_015733:3736104*37361043837697101594Pseudomonas putida S16 chromosome, complete genome4e-20107BLASTN svgBLASTP svg
NC_008380:4968492*4968492498809919608Rhizobium leguminosarum bv. viciae 3841, complete genome3e-18101BLASTN svgBLASTP svg
NC_010682:2642269*2642269266509922831Ralstonia pickettii 12J chromosome 1, complete sequence3e-18101BLASTN svgBLASTP svg
NC_007925:138927*13892717109932173Rhodopseudomonas palustris BisB18, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_008435:604772*60477264849843727Rhodopseudomonas palustris BisA53, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_012856:2266187*2266187228576319577Ralstonia pickettii 12D chromosome 1, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_009720:216589*21658924097524387Xanthobacter autotrophicus Py2, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_013446:2237854*2237854227259934746Comamonas testosteroni CNB-2, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_008061:21068482106848213789431047Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence1e-1489.7BLASTN svgBLASTP svg
NC_008543:12767512767515311825444Burkholderia cenocepacia HI2424 chromosome 2, complete sequence1e-1489.7BLASTN svgBLASTP svg
NC_010515:26910002691000272570834709Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence1e-1489.7BLASTN svgBLASTP svg
NC_009648:22527572252757228316130405Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_008702:1432952*1432952147997747026Azoarcus sp. BH72, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014831:8965*89654370634742Thermaerobacter marianensis DSM 12885 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_008781:26550712655071268316628096Polaromonas naphthalenivorans CJ2, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_002678:3210751*3210751323209921349Mesorhizobium loti MAFF303099, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_002947:4484824*4484824451609931276Pseudomonas putida KT2440, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_012483:30784*307848496154178Acidobacterium capsulatum ATCC 51196, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_012559:1228280*1228280127461346334Laribacter hongkongensis HLHK9, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_013851:1866523*1866523188892822406Allochromatium vinosum DSM 180 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_014923:1249267*1249267127291123645Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete4e-1177.8BLASTN svgBLASTP svg
NC_010515:11242981124298115292928632Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_015563:3979500*3979500400273623237Delftia sp. Cs1-4 chromosome, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_010512:95152795152797635724831Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_000911:240863*24086326409923237Synechocystis sp. PCC 6803, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007494:1*12004420044Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence6e-0763.9BLASTN svgBLASTP svg
NC_009050:567209*56720959401626808Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequence6e-0763.9BLASTN svgBLASTP svg
NC_015975:267994*26799428810120108Lactobacillus ruminis ATCC 27782 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015161:162000*16200018601224013Deinococcus proteolyticus MRP chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_007643:791500*79150081271221213Rhodospirillum rubrum ATCC 11170, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_003869:14153*141533317319021Thermoanaerobacter tengcongensis MB4, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_002927:43927684392768441559922832Bordetella bronchiseptica RB50, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_007519:1782067*1782067181840436338Desulfovibrio alaskensis G20 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_007644:3229*32292661523387Moorella thermoacetica ATCC 39073, complete genome9e-0660BLASTN svgBLASTP svg
NC_007952:19342491934249195801423766Burkholderia xenovorans LB400 chromosome 2, complete sequence9e-0660BLASTN svgBLASTP svg
NC_008009:4421992*4421992444911527124Acidobacteria bacterium Ellin345, complete genome9e-0660BLASTN svgBLASTP svg
NC_010424:14657*146574330928653Candidatus Desulforudis audaxviator MP104C, complete genome9e-0660BLASTN svgBLASTP svg
NC_015850:10069801006980104635039371Acidithiobacillus caldus SM-1 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_019978:39000*390005838419385Halobacteroides halobius DSM 5150, complete genome9e-0660BLASTN svgBLASTP svg
NC_006177:835459*83545985883523377Symbiobacterium thermophilum IAM 14863, complete genome9e-0660BLASTN svgBLASTP svg