Pre_GI: BLASTN Hits

Some Help

Query: NC_017221:441948 Bifidobacterium longum subsp. longum KACC 91563 chromosome,

Start: 441948, End: 465361, Length: 23414

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010816:2252732*2252732227470521974Bifidobacterium longum DJO10A, complete genome019670BLASTN svgBLASTP svg
NC_010816:2326453*2326453235368827236Bifidobacterium longum DJO10A, complete genome02696BLASTN svgBLASTP svg
NC_004307:18158251815825184877532951Bifidobacterium longum NCC2705, complete genome6e-143515BLASTN svgBLASTP svg
NC_015052:2383865*2383865240599922135Bifidobacterium longum subsp. infantis 157F, complete genome2e-68268BLASTN svgBLASTP svg
NC_013521:3204250*3204250324548941240Sanguibacter keddieii DSM 10542, complete genome2e-31145BLASTN svgBLASTP svg
NC_014924:33343863334386336113526750Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome8e-22113BLASTN svgBLASTP svg
NC_013235:13259751325975134970523731Nakamurella multipartita DSM 44233, complete genome2e-19105BLASTN svgBLASTP svg
NC_007963:81414881414884084326696Chromohalobacter salexigens DSM 3043, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_008463:12930791293079133019337115Pseudomonas aeruginosa UCBPP-PA14, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_015733:11799771179977119809918123Pseudomonas putida S16 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_011071:18775001877500190261425115Stenotrophomonas maltophilia R551-3, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_007005:14159621415962143723321272Pseudomonas syringae pv. syringae B728a, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_010407:31744703174470319754523076Clavibacter michiganensis subsp. sepedonicus chromosome, complete2e-1385.7BLASTN svgBLASTP svg
NC_002516:1031386*1031386109196460579Pseudomonas aeruginosa PAO1, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_008618:10950001095000111462019621Bifidobacterium adolescentis ATCC 15703, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_015566:40490004049000406909920100Serratia sp. AS12 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_015947:18778871877887190023222346Burkholderia sp. JV3 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_015957:10505870105058701052808222213Streptomyces violaceusniger Tu 4113 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_012779:30163273016327304089024564Edwardsiella ictaluri 93-146, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015138:20697392069739210074231004Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete3e-1281.8BLASTN svgBLASTP svg
NC_018681:1021063*1021063104680525743Nocardia brasiliensis ATCC 700358 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014844:26389942638994265855019557Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_019960:1198067*1198067122826330197Prevotella dentalis DSM 3688 chromosome 1, complete sequence7e-1073.8BLASTN svgBLASTP svg
NC_014973:3290545*3290545331870328159Geobacter sp. M18 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_002950:155873*15587318325427382Porphyromonas gingivalis W83, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010729:265791*26579129310327313Porphyromonas gingivalis ATCC 33277, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014836:1052214*1052214107658924376Desulfurispirillum indicum S5 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014910:966761*96676199256725807Alicycliphilus denitrificans BC chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015422:910292*91029293677826487Alicycliphilus denitrificans K601 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015571:440605*44060546793427330Porphyromonas gingivalis TDC60, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_018681:53781975378197541859940403Nocardia brasiliensis ATCC 700358 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010943:20911992091199211510023902Stenotrophomonas maltophilia K279a, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014532:722151*72215174114018990Halomonas elongata DSM 2581, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_020126:46223714622371465424731877Myxococcus stipitatus DSM 14675, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_019673:7738588*7738588775761819031Saccharothrix espanaensis DSM 44229 complete genome7e-0763.9BLASTN svgBLASTP svg
NC_002928:13517501351750137549523746Bordetella parapertussis 12822, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_020064:35175003517500354133523836Serratia marcescens FGI94, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014910:2015627*2015627203840722781Alicycliphilus denitrificans BC chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008786:2687688*2687688271388926202Verminephrobacter eiseniae EF01-2, complete genome3e-0661.9BLASTN svgBLASTP svg