Pre_GI: BLASTN Hits

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Query: NC_017219:275476 Bifidobacterium longum subsp. infantis ATCC 15697, complete genome

Start: 275476, End: 298099, Length: 22624

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012814:1757753*1757753178063522883Bifidobacterium animalis subsp. lactis Bl-04, complete genome2e-81311BLASTN svgBLASTP svg
NC_012815:1757992*1757992178040722416Bifidobacterium animalis subsp. lactis DSM 10140, complete genome1e-76295BLASTN svgBLASTP svg
NC_018720:357716*35771638686729152Bifidobacterium asteroides PRL2011 chromosome, complete genome9e-71276BLASTN svgBLASTP svg
NC_015067:1528984*1528984156187832895Bifidobacterium longum subsp. longum JCM 1217, complete genome3e-49204BLASTN svgBLASTP svg
NC_010816:18524061852406187962927224Bifidobacterium longum DJO10A, complete genome1e-39172BLASTN svgBLASTP svg
NC_004307:18158251815825184877532951Bifidobacterium longum NCC2705, complete genome1e-39172BLASTN svgBLASTP svg
NC_013714:13765001376500141614039641Bifidobacterium dentium Bd1, complete genome8e-25123BLASTN svgBLASTP svg
NC_010816:62184962184964504823200Bifidobacterium longum DJO10A, complete genome2e-22115BLASTN svgBLASTP svg
NC_015052:1569255*1569255159297923725Bifidobacterium longum subsp. infantis 157F, complete genome2e-22115BLASTN svgBLASTP svg
NC_015052:47194447194450736635423Bifidobacterium longum subsp. infantis 157F, complete genome2e-22115BLASTN svgBLASTP svg
NC_015067:2282000*2282000230417622177Bifidobacterium longum subsp. longum JCM 1217, complete genome2e-22115BLASTN svgBLASTP svg
NC_015067:45962645962649282633201Bifidobacterium longum subsp. longum JCM 1217, complete genome2e-22115BLASTN svgBLASTP svg
NC_011992:1179084*1179084120383024747Acidovorax ebreus TPSY, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_011770:28042182804218282883824621Pseudomonas aeruginosa LESB58, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_013441:45390354539035455886719833Gordonia bronchialis DSM 43247, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_013441:27614592761459278449623038Gordonia bronchialis DSM 43247, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_012803:19809551980955200418223228Micrococcus luteus NCTC 2665, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_013595:8553904*8553904857655422651Streptosporangium roseum DSM 43021, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_004369:1051013*1051013107385922847Corynebacterium efficiens YS-314, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_015671:3470903*3470903349501524113Cellvibrio gilvus ATCC 13127 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_020291:6216000*6216000625247336474Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010723:3530000*3530000357960049601Clostridium botulinum E3 str. Alaska E43, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010674:3674739*3674739372221147473Clostridium botulinum B str. Eklund 17B, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014831:19066911906691195238745697Thermaerobacter marianensis DSM 12885 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014814:3364336*3364336338651822183Mycobacterium sp. Spyr1 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_009434:3611738*36117383748875137138Pseudomonas stutzeri A1501, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_011757:10914861091486111319221707Methylobacterium chloromethanicum CM4, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013169:1058463*1058463108536926907Kytococcus sedentarius DSM 20547, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015422:34933963493396351574822353Alicycliphilus denitrificans K601 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_010520:3526883*3526883355123524353Clostridium botulinum A3 str. Loch Maree, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_009077:3851203*3851203387313021928Mycobacterium sp. JLS, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_014151:37088237088239435823477Cellulomonas flavigena DSM 20109 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009439:91853491853494240823875Pseudomonas mendocina ymp, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009142:827912*82791284912621215Saccharopolyspora erythraea NRRL 2338, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_013169:24238632423863245464230780Kytococcus sedentarius DSM 20547, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014151:40213944021394406852347130Cellulomonas flavigena DSM 20109 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_015740:2692023*2692023271734525323Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete7e-1073.8BLASTN svgBLASTP svg
NC_010602:42028442028444011019827Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'3e-0971.9BLASTN svgBLASTP svg
NC_010842:42585442585444998024127Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosome3e-0971.9BLASTN svgBLASTP svg
NC_011004:1136895*1136895116187724983Rhodopseudomonas palustris TIE-1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015186:36502*365025988323382Acidiphilium multivorum AIU301, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015422:28582282858228292680368576Alicycliphilus denitrificans K601 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_016027:2047954*2047954211021762264Gluconacetobacter xylinus NBRC 3288, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_019974:1909244*1909244194059931356Natronococcus occultus SP4, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008782:15661721566172158601319842Acidovorax sp. JS42, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013169:47485647485649551820663Kytococcus sedentarius DSM 20547, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_021150:18238741823874184285118978Azotobacter vinelandii CA6, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_016011:59070*590708009921030Listeria ivanovii subsp. ivanovii PAM 55, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012560:18238611823861184283818978Azotobacter vinelandii DJ, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_003212:57061*5706110108744027Listeria innocua Clip11262, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_002973:72328*723289511822791Listeria monocytogenes str. 4b F2365, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_003155:64445006444500646671722218Streptomyces avermitilis MA-4680, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007759:2748000*2748000277201124012Syntrophus aciditrophicus SB, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009565:2306574*2306574233169725124Mycobacterium tuberculosis F11, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011757:5693584*5693584571331619733Methylobacterium chloromethanicum CM4, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014033:1062935*1062935108059917665Prevotella ruminicola 23 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014210:56836165683616570702223407Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,2e-0765.9BLASTN svgBLASTP svg
NC_007778:3784104*3784104381456530462Rhodopseudomonas palustris HaA2, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008782:15100001510000154094730948Acidovorax sp. JS42, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008782:28578992857899289359935701Acidovorax sp. JS42, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010674:426256*42625645229426039Clostridium botulinum B str. Eklund 17B, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010723:420025*42002544661626592Clostridium botulinum E3 str. Alaska E43, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_011527:12559981255998129002234025Coxiella burnetii CbuG_Q212, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_011528:14920001492000152159929600Coxiella burnetii CbuK_Q154, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_013730:58840588408228023441Spirosoma linguale DSM 74, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015942:1711026*1711026173659925574Acidithiobacillus ferrivorans SS3 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_020207:2240115*2240115226013620022Enterococcus faecium NRRL B-2354, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010804:2960352*2960352297848118130Burkholderia multivorans ATCC 17616 chromosome 1, complete3e-0661.9BLASTN svgBLASTP svg
NC_002929:3305682*3305682333485129170Bordetella pertussis Tohama I, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002927:960369*96036999159931231Bordetella bronchiseptica RB50, complete genome3e-0661.9BLASTN svgBLASTP svg