Pre_GI: BLASTN Hits

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Query: NC_017219:2646157 Bifidobacterium longum subsp. infantis ATCC 15697, complete genome

Start: 2646157, End: 2696123, Length: 49967

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015052:21815142181514221381832305Bifidobacterium longum subsp. infantis 157F, complete genome06096BLASTN svgBLASTP svg
NC_010816:18524061852406187962927224Bifidobacterium longum DJO10A, complete genome05933BLASTN svgBLASTP svg
NC_004307:18158251815825184877532951Bifidobacterium longum NCC2705, complete genome03870BLASTN svgBLASTP svg
NC_015067:21360482136048216896932922Bifidobacterium longum subsp. longum JCM 1217, complete genome01287BLASTN svgBLASTP svg
NC_008618:20001720001722396823952Bifidobacterium adolescentis ATCC 15703, complete genome0948BLASTN svgBLASTP svg
NC_012815:1757992*1757992178040722416Bifidobacterium animalis subsp. lactis DSM 10140, complete genome2e-169605BLASTN svgBLASTP svg
NC_012814:1757753*1757753178063522883Bifidobacterium animalis subsp. lactis Bl-04, complete genome2e-169605BLASTN svgBLASTP svg
NC_013714:22943422294342232581731476Bifidobacterium dentium Bd1, complete genome1e-68270BLASTN svgBLASTP svg
NC_004307:11083251108325114340935085Bifidobacterium longum NCC2705, complete genome1e-53220BLASTN svgBLASTP svg
NC_013204:23714992371499240814536647Eggerthella lenta DSM 2243, complete genome9e-39170BLASTN svgBLASTP svg
NC_018720:357716*35771638686729152Bifidobacterium asteroides PRL2011 chromosome, complete genome2e-36163BLASTN svgBLASTP svg
NC_015145:26937492693749273661842870Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome5e-34155BLASTN svgBLASTP svg
NC_015389:1298689*1298689133142232734Coriobacterium glomerans PW2 chromosome, complete genome8e-30141BLASTN svgBLASTP svg
NC_013714:2086526*2086526215532168796Bifidobacterium dentium Bd1, complete genome1e-28137BLASTN svgBLASTP svg
NC_008541:29895002989500300743117932Arthrobacter sp. FB24 chromosome 1, complete sequence1e-25127BLASTN svgBLASTP svg
NC_013530:28195692819569285198132413Xylanimonas cellulosilytica DSM 15894, complete genome2e-21113BLASTN svgBLASTP svg
NC_012815:16039161603916165709953184Bifidobacterium animalis subsp. lactis DSM 10140, complete genome3e-1799.6BLASTN svgBLASTP svg
NC_012814:15992411599241165827959039Bifidobacterium animalis subsp. lactis Bl-04, complete genome3e-1799.6BLASTN svgBLASTP svg
NC_011886:26966712696671271597719307Arthrobacter chlorophenolicus A6, complete genome4e-1695.6BLASTN svgBLASTP svg
NC_018581:11809511180951122156540615Gordonia sp. KTR9 chromosome, complete genome4e-1695.6BLASTN svgBLASTP svg
NC_013715:1750403*1750403177144221040Rothia mucilaginosa DY-18, complete genome4e-1385.7BLASTN svgBLASTP svg
NC_008711:34543593454359349427739919Arthrobacter aurescens TC1, complete genome4e-1385.7BLASTN svgBLASTP svg
NC_007613:86408486408489531131228Shigella boydii Sb227, complete genome4e-1385.7BLASTN svgBLASTP svg
NC_013446:3147202*3147202318258835387Comamonas testosteroni CNB-2, complete genome2e-1283.8BLASTN svgBLASTP svg
NC_013093:125363*12536314809922737Actinosynnema mirum DSM 43827, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_021064:20852312085231211080625576Propionibacterium avidum 44067, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_014363:645397*64539768181236416Olsenella uli DSM 7084 chromosome, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_015520:224136*22413626409939964Mahella australiensis 50-1 BON chromosome, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_010162:78248787824878785192027043Sorangium cellulosum 'So ce 56', complete genome2e-0973.8BLASTN svgBLASTP svg
NC_013947:2113941*2113941214484730907Stackebrandtia nassauensis DSM 44728 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_014924:32705473270547329089620350Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_015424:16895001689500172544435945Aeromonas veronii B565 chromosome, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_008618:1456000*1456000148109925100Bifidobacterium adolescentis ATCC 15703, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_010658:10901041090104112159931496Shigella boydii CDC 3083-94, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_009051:16510216510219763632535Methanoculleus marisnigri JR1, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_013235:46189084618908464215923252Nakamurella multipartita DSM 44233, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_009439:47342374734237475635022114Pseudomonas mendocina ymp, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014727:88913288913290727818147Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,6e-0661.9BLASTN svgBLASTP svg
NC_005125:48050048050051032729828Gloeobacter violaceus PCC 7421, complete genome6e-0661.9BLASTN svgBLASTP svg