Pre_GI: BLASTN Hits

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Query: NC_017219:1651425 Bifidobacterium longum subsp. infantis ATCC 15697, complete genome

Start: 1651425, End: 1675354, Length: 23930

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015052:1030708*1030708106947238765Bifidobacterium longum subsp. infantis 157F, complete genome04121BLASTN svgBLASTP svg
NC_006361:1547034*1547034157675929726Nocardia farcinica IFM 10152, complete genome2e-22115BLASTN svgBLASTP svg
NC_006177:52005552005554053820484Symbiobacterium thermophilum IAM 14863, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_015859:1099919*1099919113350433586Corynebacterium variabile DSM 44702 chromosome, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_015873:21058472105847214108435238Megasphaera elsdenii DSM 20460, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_012470:853561*85356188426730707Streptococcus equi subsp. zooepidemicus, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_002696:1154996*1154996117718622191Caulobacter crescentus CB15, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_012560:13220001322000135714535146Azotobacter vinelandii DJ, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_021150:13220001322000135715735158Azotobacter vinelandii CA6, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_007761:241900*24190026263520736Rhizobium etli CFN 42, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014844:903877*90387792643122555Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_011769:34347443434744346368228939Desulfovibrio vulgaris str. 'Miyazaki F', complete genome3e-0971.9BLASTN svgBLASTP svg
NC_011134:1222739*1222739124792825190Streptococcus equi subsp. zooepidemicus str. MGCS10565, complete1e-0869.9BLASTN svgBLASTP svg
NC_010617:1467000*1467000148518718188Kocuria rhizophila DC2201, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_016027:2387832*2387832241009922268Gluconacetobacter xylinus NBRC 3288, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007492:33328393332839335417921341Pseudomonas fluorescens PfO-1, complete genome3e-0661.9BLASTN svgBLASTP svg