Pre_GI: BLASTP Hits

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Query: NC_017219:711431:711431 Bifidobacterium longum subsp. infantis ATCC 15697, complete genome

Start: 711431, End: 712018, Length: 588

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017221:495088:496425496425497156732Bifidobacterium longum subsp. longum KACC 91563 chromosome,AcrR family transcriptional regulator7e-33140
NC_015389:1858732:187731018773101877954645Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, TetR family1e-31136
NC_017221:495088:514700514700515314615Bifidobacterium longum subsp. longum KACC 91563 chromosome,transcriptional regulator3e-29128
NC_008618:1487000:149429714942971494932636Bifidobacterium adolescentis ATCC 15703, complete genomepossible TetR-type transcriptional regulator2e-26119
NC_008618:1487000:150279615027961503530735Bifidobacterium adolescentis ATCC 15703, complete genomepossible TetR-type transcriptional regulator2e-25115
NC_013929:2583849:258533825853382585931594Streptomyces scabiei 87.22 chromosome, complete genomeTetR family transcriptional regulator2e-2099
NC_009921:3666898:370507837050783705695618Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family2e-1892.4
NC_009921:522000:551311551311551880570Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family4e-1890.9
NC_009480:99640:128542128542129288747Clavibacter michiganensis subsp. michiganensis NCPPB 382, completetranscriptional regulator, TetR family5e-1684.3
NC_009664:4423829:445172844517284452351624Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, TetR family3e-1581.6
NC_013093:5791961:581324958132495813830582Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, TetR family3e-1581.6
NC_009921:3666898:373621137362113736819609Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family5e-1580.9
NC_008618:1487000:149108814910881491390303Bifidobacterium adolescentis ATCC 15703, complete genomepossible TetR-type transcriptional regulator3e-1374.7
NC_013929:8525000:853867185386718539318648Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein1e-1273.2
NC_009921:5275694:529638452963845297010627Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family6e-1270.5
NC_014246:611275:636808636808637455648Mobiluncus curtisii ATCC 43063 chromosome, complete genomeTetR family transcriptional regulator1e-1169.3
NC_009921:5275694:529173252917325292325594Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family4e-1167.8
NC_005773:866157:882507882507883145639Pseudomonas syringae pv. phaseolicola 1448A, complete genometranscriptional regulator, TetR family3e-0961.6
NC_016629:415711:433527433527434234708Desulfovibrio africanus str. Walvis Bay chromosome, completeTranscriptional regulator TetR4e-0754.7
NC_011898:2509267:253223225322322532846615Clostridium cellulolyticum H10, complete genometranscriptional regulator, TetR family5e-0754.3
NC_011887:72364:813868138681883498Methylobacterium nodulans ORS 2060 plasmid pMNOD02, completetranscriptional regulator, TetR family3e-0651.6
NC_006177:2398482:242190624219062422553648Symbiobacterium thermophilum IAM 14863, complete genomeTetR family transcriptional regulator3e-0651.6