Pre_GI: BLASTP Hits

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Query: NC_017219:2014605:2018835 Bifidobacterium longum subsp. infantis ATCC 15697, complete genome

Start: 2018835, End: 2019284, Length: 450

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011593:2014787:201901720190172019466450Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,regulatory protein GntR4e-81299
NC_015589:3085442:309769230976923098066375Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeregulatory protein GntR6e-1786.3
NC_010001:4250828:426343842634384263818381Clostridium phytofermentans ISDg, complete genometranscriptional regulator, GntR family9e-1785.9
NC_012778:1946924:195058319505831950966384Eubacterium eligens ATCC 27750, complete genomeGntR family transcriptional regulator / MocR family aminotransferase5e-1580.1
NC_013165:329185:374694374694375074381Slackia heliotrinireducens DSM 20476, complete genomepredicted transcriptional regulator8e-1372.8
NC_010999:2450974:245773324577332458107375Lactobacillus casei, complete genomeRegulatory protein GntR, HTH1e-1272
NC_013204:2826500:282801928280192828498480Eggerthella lenta DSM 2243, complete genometranscriptional regulator, GntR family2e-1271.2
NC_013595:41245:542395423954604366Streptosporangium roseum DSM 43021, complete genometranscriptional regulator protein-like protein1e-1168.6
NC_016626:1825845:1851434185143418528551422Burkholderia sp. YI23 plasmid byi_1p, complete sequenceGntR family transcriptional regulator2e-1167.8
NC_017219:2014605:202231920223192022693375Bifidobacterium longum subsp. infantis ATCC 15697, complete genometranscriptional regulator3e-1167.4
NC_011593:2014787:202250120225012022875375Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,regulatory protein GntR3e-1167.4
NC_000853:771746:792240792240792605366Thermotoga maritima MSB8, complete genometranscriptional regulator, GntR family5e-1166.6
NC_014118:1559770:1566130156613015676531524Burkholderia sp. CCGE1002 chromosome chromosome 2, completetranscriptional regulator, GntR family with aminotransferase domain9e-1165.9
NC_018524:1279156:1301474130147413030301557Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomebacterial regulatory s, gntR family protein9e-1165.9
NC_013642:545464:565944565944566309366Thermotoga naphthophila RKU-10, complete genometranscriptional regulator, GntR family2e-1064.7
NC_009486:155651:155651155651156016366Thermotoga petrophila RKU-1 chromosome, complete genomeregulatory protein GntR2e-1064.7
NC_012669:96966:114794114794115174381Beutenbergia cavernae DSM 12333, complete genometranscriptional regulator, GntR family2e-1064.7
NC_018515:1406816:142889914288991429282384Desulfosporosinus meridiei DSM 13257 chromosome, complete genometranscriptional regulator2e-1064.7
NC_009725:2859630:286726728672672867659393Bacillus amyloliquefaciens FZB42, complete genomeYtrA2e-1064.7
NC_002976:1540794:154170815417081542085378Staphylococcus epidermidis RP62A, complete genometranscriptional regulator, GntR family3e-1063.9
NC_004129:2440744:2445027244502724464301404Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, GntR family4e-1063.5
NC_012673:2535427:257491425749142575303390Exiguobacterium sp. AT1b, complete genometranscriptional regulator, GntR family8e-1062.8
NC_014152:1:206392063921016378Thermincola sp. JR, complete genometranscriptional regulator, GntR family8e-1062.8
UCMB5137:2128500:214259721425972142974378Bacillus atrophaeus UCMB-5137GntR family transcriptional regulator7e-1062.8
NC_014639:2169277:217930621793062179683378Bacillus atrophaeus 1942 chromosome, complete genomeGntR family transcriptional regulator1e-0962
CP002207:2169277:217930621793062179683378Bacillus atrophaeus 1942, complete genomeGntR family transcriptional regulator1e-0962
NC_019897:329945:376575376575376955381Thermobacillus composti KWC4 chromosome, complete genometranscriptional regulator1e-0962
NC_015949:47414:482944829448677384Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeGntR family transcriptional regulator1e-0962
NC_008346:2579756:258415125841512584543393Syntrophomonas wolfei subsp. wolfei str. Goettingen, completetranscriptional regulator, GntR family2e-0961.6
NC_020164:887510:906911906911907288378Staphylococcus warneri SG1, complete genomeGntR family transcriptional regulator2e-0961.6
NC_016052:2274427:2288735228873522901621428Tetragenococcus halophilus NBRC 12172, complete genomeputative GntR family transcriptional regulator3e-0960.5
NC_013174:601434:618920618920619279360Jonesia denitrificans DSM 20603, complete genometranscriptional regulator, GntR family4e-0960.5
NC_014363:114239:129522129522129881360Olsenella uli DSM 7084 chromosome, complete genometranscriptional regulator, GntR family6e-0959.7
NC_016625:944925:9569719569719584911521Burkholderia sp. YI23 chromosome 2, complete sequenceGntR family transcriptional regulator7e-0959.3
NC_010001:2836995:285926328592632859625363Clostridium phytofermentans ISDg, complete genometranscriptional regulator, GntR family7e-0959.3
NC_016631:5478098:550109155010915501534444Granulicella mallensis MP5ACTX8 chromosome, complete genomeGntR family transcriptional regulator8e-0959.3
NC_017208:64500:8740587405888171413Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeGntR family transcriptional regulator1e-0858.9
NC_009848:161373:170355170355170726372Bacillus pumilus SAFR-032, complete genomeGntR family transcriptional regulator9e-0958.9
NC_013729:2157785:217111721711172171860744Kribbella flavida DSM 17836, complete genometranscriptional regulator, GntR family1e-0858.5
NC_013947:2351208:236247523624752362864390Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, GntR family2e-0858.2
NC_007677:1872459:188881218888121889792981Salinibacter ruber DSM 13855, complete genometranscriptional regulator, GntR family protein2e-0858.2
NC_012781:2148478:215126721512672151716450Eubacterium rectale ATCC 33656, complete genometranscriptional regulator, GntR family3e-0857.8
NC_009832:3703202:3703202370320237047041503Serratia proteamaculans 568, complete genometranscriptional regulator, GntR family with aminotransferase domain4e-0857
NC_020995:245671:2499292499292513741446Enterococcus casseliflavus EC20, complete genomehypothetical protein4e-0857
NC_016943:1956719:196450919645091964916408Blastococcus saxobsidens DD2, complete genomeGntR family transcriptional regulator4e-0857
NC_011835:1819707:182058218205821821001420Bifidobacterium animalis subsp. lactis AD011 chromosome, completeregulatory protein GntR4e-0857
NC_017216:1092751:109362610936261094045420Bifidobacterium animalis subsp. lactis BLC1, complete genometranscriptional regulator, gntR family protein4e-0857
NC_007947:2447635:245227024522702453046777Methylobacillus flagellatus KT, complete genometranscriptional regulator, GntR family5e-0856.6
NC_014833:1045180:106518010651801065554375Ruminococcus albus 7 chromosome, complete genomeGntR family transcriptional regulator7e-0856.2
NC_012673:1679744:1678344167834416797471404Exiguobacterium sp. AT1b, complete genometranscriptional regulator, GntR family with aminotransferase domain7e-0856.2
NC_013730:3137391:3153355315335531547941440Spirosoma linguale DSM 74, complete genometranscriptional regulator, GntR family with aminotransferase domain6e-0856.2
NC_009482:87193:8719387193882931101Synechococcus sp. RCC307 chromosome, complete genometranscriptional regulator6e-0856.2
NC_012815:1092795:109367010936701094206537Bifidobacterium animalis subsp. lactis DSM 10140, complete genomehypothetical protein6e-0856.2
NC_012814:1092860:109373510937351094271537Bifidobacterium animalis subsp. lactis Bl-04, complete genomehypothetical protein6e-0856.2
NC_017217:1092916:109379110937911094327537Bifidobacterium animalis subsp. lactis V9 chromosome, completehypothetical protein6e-0856.2
NC_017215:1091941:109343310934331094128696Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,GntR family transcriptional regulator8e-0855.8
NC_017214:1727676:172855117285511729246696Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeGntR family transcriptional regulator8e-0855.8
NC_008314:1559102:1578044157804415794771434Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator, MocR family1e-0755.5
NC_013929:7663631:7672321767232176737331413Streptomyces scabiei 87.22 chromosome, complete genomeGntR family transcriptional regulator2e-0755.1
NC_013517:2437574:247965924796592480018360Sebaldella termitidis ATCC 33386, complete genometranscriptional regulator, GntR family1e-0755.1
NC_014393:92500:928219282193204384Clostridium cellulovorans 743B chromosome, complete genometranscriptional regulator, GntR family1e-0755.1
NC_016109:5455060:547507154750715475418348Kitasatospora setae KM-6054, complete genomeGntR family transcriptional regulator2e-0754.7
NC_011146:3537546:3546585354658535479791395Geobacter bemidjiensis Bem, complete genomeputative transcriptional regulator, GntR family2e-0754.7
NC_013235:593289:609126609126609497372Nakamurella multipartita DSM 44233, complete genometranscriptional regulator, GntR family3e-0754.3
NC_014935:836868:8527328527328541231392Nitratifractor saLSUginis DSM 16511 chromosome, complete genometranscriptional regulator, gntr family with aminotransferase domain protein2e-0754.3
NC_011750:2928990:2968066296806629694001335Escherichia coli IAI39 chromosome, complete genomebifunctional aminotransaminase/GntR family transcriptional regulator2e-0754.3
NC_014815:3272791:327794232779423278337396Micromonospora sp. L5 chromosome, complete genometranscriptional regulator, gntr family2e-0754.3
NC_005071:87907:135307135307136296990Prochlorococcus marinus str. MIT 9313, complete genomepossible transcriptional regulator4e-0753.5
NC_017030:9028412:9032465903246590339701506Corallococcus coralloides DSM 2259 chromosome, complete genomeGntR family transcriptional regulator5e-0753.5
NC_008593:1917118:191914919191491919529381Clostridium novyi NT, complete genometranscriptional regulator, gntR family5e-0753.5
NC_013166:82986:869848698487373390Kangiella koreensis DSM 16069, complete genometranscriptional regulator, GntR family6e-0753.1
NC_008786:1767315:1773910177391017753671458Verminephrobacter eiseniae EF01-2, complete genomeputative transcriptional regulator, GntR family8e-0752.8
NC_014098:1670327:1683243168324316846461404Bacillus tusciae DSM 2912 chromosome, complete genometranscriptional regulator, GntR family with aminotransferase domain7e-0752.8
NC_021184:504728:5106275106275121441518Desulfotomaculum gibsoniae DSM 7213, complete genometranscriptional regulator with HTH domain and aminotransferase domain7e-0752.8
NC_017195:517344:5541435541435555341392Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeYdeL7e-0752.8
NC_015425:2144639:214552921455292145924396Clostridium botulinum BKT015925 chromosome, complete genomeGntR family transcriptional regulator9e-0752.4
NC_013173:2261396:226881722688172269518702Desulfomicrobium baculatum DSM 4028, complete genomeGntR domain protein9e-0752.4
NC_014376:4369666:437329843732984374047750Clostridium saccharolyticum WM1 chromosome, complete genometranscriptional regulator, GntR family1e-0652.4
NC_016113:803268:812013812013812744732Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequenceProtein korA1e-0652.4
NC_010002:4073724:4077325407732540788391515Delftia acidovorans SPH-1, complete genometranscriptional regulator, GntR family with aminotransferase domain1e-0652
NC_010623:1871492:1919564191956419211351572Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, GntR family with aminotransferase domain1e-0652
NC_016745:123772:1251211251211265391419Oceanimonas sp. GK1 chromosome, complete genomeGntR family transcriptional regulator1e-0652
NC_011899:1603500:1607699160769916088051107Halothermothrix orenii H 168, complete genomeregulatory protein GntR HTH1e-0652
NC_014479:509919:5384715384715398621392Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative PLP-dependent transcriptional regulator2e-0651.6
NC_016048:4163225:4206076420607642074881413Oscillibacter valericigenes Sjm18-20, complete genomeputative GntR family transcriptional regulator2e-0651.6
NC_009633:1595501:1620053162005316214501398Alkaliphilus metalliredigens QYMF chromosome, complete genomeGntR family transcriptional regulator2e-0651.2
NC_008463:282565:3183323183323197531422Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative transcriptional regulator, GntR family2e-0651.2
NC_014318:9604367:962238796223879622740354Amycolatopsis mediterranei U32 chromosome, complete genomeGntR family transcriptional regulator2e-0651.2
NC_017186:9604427:962244796224479622800354Amycolatopsis mediterranei S699 chromosome, complete genomeGntR family transcriptional regulator2e-0651.2
NC_016047:683368:6849566849566863471392Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completehypothetical protein2e-0651.2
NC_014815:2363460:237886623788662379090225Micromonospora sp. L5 chromosome, complete genometranscriptional regulator, gntr family2e-0651.2
NC_006582:1297039:1310905131090513123201416Bacillus clausii KSM-K16, complete genometranscriptional regulator, GntR family2e-0651.2
NC_009921:1611132:161877516187751619167393Frankia sp. EAN1pec, complete genometranscriptional regulator, GntR family3e-0650.8
NC_020244:516993:5497625497625511531392Bacillus subtilis XF-1, complete genomeputative PLP-dependent transcriptional regulator3e-0650.8
NC_013205:1275012:129900712990071299420414Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transcriptional regulator, GntR family3e-0650.8
NC_014376:3399366:340246434024643402877414Clostridium saccharolyticum WM1 chromosome, complete genometranscriptional regulator, GntR family3e-0650.8
NC_009706:3882500:389714138971413897554414Clostridium kluyveri DSM 555 chromosome, complete genometranscriptional regulator3e-0650.8
NC_011837:3814000:382864438286443829057414Clostridium kluyveri NBRC 12016, complete genomehypothetical protein3e-0650.8
NC_007947:577315:5883245883245898051482Methylobacillus flagellatus KT, complete genometranscriptional regulator, GntR family3e-0650.8
NC_011894:3797500:380047338004733801228756Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, GntR family4e-0650.4
NC_015160:612000:634388634388635122735Odoribacter splanchnicus DSM 20712 chromosome, complete genometranscriptional regulator, GntR family4e-0650.4
NC_009654:91096:9749297492990691578Marinomonas sp. MWYL1, complete genomeGntR family transcriptional regulator4e-0650.4
NC_019673:1275627:129120512912051291603399Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein4e-0650.4
NC_016114:3008500:302031030203103021026717Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeGntR family transcriptional regulator5e-0650.1
NC_013729:380312:391510391510392364855Kribbella flavida DSM 17836, complete genometranscriptional regulator, GntR family5e-0650.1
NC_019673:1420198:143062914306291431012384Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein7e-0649.7
NC_003030:279643:297523297523297888366Clostridium acetobutylicum ATCC 824, complete genomeTranscriptional regulator, GntR family7e-0649.7
NC_015687:279641:297521297521297886366Clostridium acetobutylicum DSM 1731 chromosome, complete genomeGntR family transcriptional regulator7e-0649.7
NC_017295:279633:297513297513297878366Clostridium acetobutylicum EA 2018 chromosome, complete genomeGntR family transcriptional regulator7e-0649.7
NC_009953:1799416:180600218060021806868867Salinispora arenicola CNS-205 chromosome, complete genomeGntR family transcriptional regulator7e-0649.7
NC_014323:1196209:1197605119760511991551551Herbaspirillum seropedicae SmR1 chromosome, complete genomeMocR family transcription regulator protein7e-0649.7
NC_014318:6817860:682515368251536825500348Amycolatopsis mediterranei U32 chromosome, complete genomeGntR family transcriptional regulator6e-0649.7
NC_017186:6817904:682519768251976825544348Amycolatopsis mediterranei S699 chromosome, complete genomeGntR family transcriptional regulator6e-0649.7
NC_016109:116995:143044143044143424381Kitasatospora setae KM-6054, complete genomeGntR family transcriptional regulator6e-0649.7
NC_006958:828089:8310978310978324581362Corynebacterium glutamicum ATCC 13032, complete genomepyridoxine biosynthesis transcriptional regulator, aminotransferase8e-0649.3
NC_018750:1092224:1109142110914211104611320Streptomyces venezuelae ATCC 10712, complete genomePredicted transcriptional regulator of pyridoxine metabolism8e-0649.3