Pre_GI: BLASTP Hits

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Query: NC_017218:178564:203488 Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genome

Start: 203488, End: 204612, Length: 1125

Host Lineage: Bifidobacterium breve; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is one of the first colonizers of the human gastrointestinal tract, and is a dominant member of the adult intestinal microbial community. Probiotics are live microbial supplements which benefit the health of an animal by maintaining normal microbial flora, producing vitamins, and stimulating the mucosal immune system




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007643:578808:5851945851945862971104Rhodospirillum rubrum ATCC 11170, complete genomeextracellular solute-binding protein, family 11e-41170
NC_015063:1:55055016561107Rahnella sp. Y9602 plasmid pRAHAQ02, complete sequencehypothetical protein2e-37157
NC_015063:122000:55055016561107Rahnella sp. Y9602 plasmid pRAHAQ02, complete sequencehypothetical protein2e-37157
NC_014828:541874:5911475911475922801134Ethanoligenens harbinense YUAN-3 chromosome, complete genomehypothetical protein2e-36153
NC_018080:1730534:1753415175341517544731059Pseudomonas aeruginosa DK2 chromosome, complete genomeABC transporter substrate-binding protein8e-30131
NC_014166:2149984:2168859216885921698811023Arcobacter nitrofigilis DSM 7299 chromosome, complete genomefamily 1 extracellular solute-binding protein3e-23109
NC_015381:1318818:1321712132171213227671056Burkholderia gladioli BSR3 chromosome 1, complete sequenceextracellular solute-binding protein3e-22106
NC_014718:791528:8012338012338023361104Burkholderia rhizoxinica HKI 454 chromosome, complete genomeABC transporter substrate-binding protein1e-21104
NC_011000:1216430:1220139122013912211671029Burkholderia cenocepacia J2315 chromosome 1, complete sequenceextracellular solute-binding protein2e-21103
NC_007948:4558000:4592642459264245937211080Polaromonas sp. JS666, complete genomeputative ABC transport system, substrate-binding exported protein4e-1892.8
NC_012563:1348500:1363689136368913647351047Clostridium botulinum A2 str. Kyoto, complete genomeABC transporter, substrate-binding protein1e-0964.7
NC_014735:149922:1499221499221510611140Halogeometricum borinquense DSM 11551 plasmid pHBOR01, completeABC-type Fe3+ transport system, periplasmic component3e-0859.7
NC_009718:1771500:178332717833271784127801Fervidobacterium nodosum Rt17-B1, complete genomeiron ABC transporter substrate-binding protein8e-0858.5
NC_012962:869295:8692958692958703261032Photorhabdus asymbiotica, complete genomeperiplasmic ferric iron-binding protein (putative periplasmic-iron binding protein)2e-0653.9
NC_014122:967194:9842959842959853201026Methanocaldococcus infernus ME chromosome, complete genomeextracellular solute-binding protein family 13e-0653.1
NC_003909:4951444:4962650496265049636841035Bacillus cereus ATCC 10987, complete genomelipoprotein, putative5e-0652.4
NC_016779:4969626:4976725497672549777591035Bacillus cereus F837/76 chromosome, complete genomeABC transporter substrate-binding protein6e-0652.4
NC_016771:4962795:4971207497120749722411035Bacillus cereus NC7401, complete genomelipoprotein8e-0652
NC_011658:5007691:5018884501888450199181035Bacillus cereus AH187 chromosome, complete genomeputative lipoprotein8e-0652