Pre_GI: BLASTP Hits

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Query: NC_017218:1655009:1664310 Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genome

Start: 1664310, End: 1666268, Length: 1959

Host Lineage: Bifidobacterium breve; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is one of the first colonizers of the human gastrointestinal tract, and is a dominant member of the adult intestinal microbial community. Probiotics are live microbial supplements which benefit the health of an animal by maintaining normal microbial flora, producing vitamins, and stimulating the mucosal immune system




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013714:1830959:1839952183995218418411890Bifidobacterium dentium Bd1, complete genomeCRISPR-associated RAMP Csd1 family protein6e-171601
NC_008618:1456000:146522814652281466094867Bifidobacterium adolescentis ATCC 15703, complete genomeCRISPR-associated protein_ CT11332e-85317
NC_008618:1456000:1466099146609914671301032Bifidobacterium adolescentis ATCC 15703, complete genomeCRISPR-associated protein_ CT11331e-73278
NC_009523:5438000:5445473544547354474131941Roseiflexus sp. RS-1 chromosome, complete genomeCRISPR-associated RAMP Csd1 family protein2e-67257
NC_010995:2798000:2805219280521928072462028Cellvibrio japonicus Ueda107, complete genomeCRISPR-associated protein, Csd1 family4e-65249
NC_008942:815280:8319018319018338501950Methanocorpusculum labreanum Z, complete genomehypothetical protein9e-65248
NC_017203:179468:1794681794681813871920Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT281,hypothetical protein7e-61235
NC_006513:1949751:1957231195723119590631833Azoarcus sp. EbN1, complete genomehypothetical protein6e-56219
NC_010381:92000:1061911061911080111821Lysinibacillus sphaericus C3-41 plasmid pBsph, complete sequencehypothetical protein4e-48193
NC_010610:1385066:1396780139678013986811902Lactobacillus fermentum IFO 3956, complete genomehypothetical protein4e-47190
NC_016584:1912000:1921326192132619234552130Desulfosporosinus orientis DSM 765 chromosome, complete genomeCRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG4e-47190
NC_007759:2748000:2756136275613627580611926Syntrophus aciditrophicus SB, complete genomehypothetical cytosolic protein2e-45184
NC_012470:1606000:1609103160910316109861884Streptococcus equi subsp. zooepidemicus, complete genomeCRISPR-associated protein6e-26119
NC_016630:28410:3651736517384391923Filifactor alocis ATCC 35896 chromosome, complete genomeCRISPR-associated protein, Csd1 family1e-25118