Pre_GI: BLASTP Hits

Some Help

Query: NC_017218:1655009:1661347 Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genome

Start: 1661347, End: 1661637, Length: 291

Host Lineage: Bifidobacterium breve; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is one of the first colonizers of the human gastrointestinal tract, and is a dominant member of the adult intestinal microbial community. Probiotics are live microbial supplements which benefit the health of an animal by maintaining normal microbial flora, producing vitamins, and stimulating the mucosal immune system




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008618:1456000:146222814622281462518291Bifidobacterium adolescentis ATCC 15703, complete genomeCRISPR-associated protein Cas23e-34143
NC_007512:1459685:147272514727251473015291Pelodictyon luteolum DSM 273, complete genomeProtein of unknown function DUF1962e-24110
NC_011060:1746000:176158617615861761876291Pelodictyon phaeoclathratiforme BU-1, complete genomeCRISPR-associated protein Cas24e-24109
NC_009337:1448607:146090314609031461190288Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeCRISPR-associated Cas2 family protein6e-24109
NC_021175:353292:364313364313364606294Streptococcus oligofermentans AS 1.3089, complete genomeCRISPR-associated protein cas27e-24109
NC_013204:2305140:231254423125442312843300Eggerthella lenta DSM 2243, complete genomeCRISPR-associated protein Cas21e-23108
NC_012470:1606000:160625516062551606545291Streptococcus equi subsp. zooepidemicus, complete genomeCRISPR-associated protein Cas28e-24108
NC_013740:842841:881739881739882029291Acidaminococcus fermentans DSM 20731, complete genomeCRISPR-associated protein Cas22e-23107
NC_014960:1380500:138425113842511384541291Anaerolinea thermophila UNI-1, complete genomehypothetical protein3e-23107
NC_007947:621213:632123632123632416294Methylobacillus flagellatus KT, complete genomeprotein of unknown function DUF1967e-22102
NC_019968:8397:207812078121071291Prevotella dentalis DSM 3688 chromosome 2, complete sequenceCRISPR-associated endoribonuclease Cas25e-22102
NC_016584:1912000:192610619261061926396291Desulfosporosinus orientis DSM 765 chromosome, complete genomeCRISPR-associated endoribonuclease Cas22e-21100
NC_010610:1385066:139389213938921394182291Lactobacillus fermentum IFO 3956, complete genomehypothetical protein2e-21100
NC_016630:28410:409624096241255294Filifactor alocis ATCC 35896 chromosome, complete genomeCRISPR-associated protein Cas24e-2199.8
NC_008741:15699:328013280133091291Desulfovibrio vulgaris subsp. vulgaris DP4 plasmid pDVUL01,CRISPR-associated protein Cas28e-2199
NC_010995:2798000:280245528024552802748294Cellvibrio japonicus Ueda107, complete genomeCRISPR-associated protein Cas27e-2199
NC_011963:1979136:199450419945041994794291Rhodobacter sphaeroides KD131 chromosome 1, complete sequenceCRISPR-associated protein, Cas2 family2e-2097.4
NC_015976:1893076:191526119152611915551291Sphingobium sp. SYK-6, complete genomehypothetical protein8e-2095.9
NC_009523:5438000:544184854418485442138291Roseiflexus sp. RS-1 chromosome, complete genomeCRISPR-associated Cas2 family protein1e-1995.1
NC_007759:2748000:275316527531652753455291Syntrophus aciditrophicus SB, complete genomehypothetical cytosolic protein6e-1992.8
NC_014034:1394898:139489813948981395188291Rhodobacter capsulatus SB1003 chromosome, complete genomeCas2 family CRISPR-associated protein1e-1892
NC_016012:665171:670097670097670387291Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeCRISPR-associated protein cas22e-1890.9
NC_014364:1116439:112782411278241128117294Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeCRISPR-associated protein Cas25e-1889.7
NC_014933:3637172:365808636580863658376291Bacteroides helcogenes P 36-108 chromosome, complete genomeCRISPR-associated protein, Cas2 family7e-1889.4
NC_005085:1269787:129286012928601293150291Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein1e-1788.6
NC_020126:9726992:973324097332409733539300Myxococcus stipitatus DSM 14675, complete genomeCRISPR-associated Cas2 family protein2e-1787.8
NC_015677:3685452:369891236989123699202291Ramlibacter tataouinensis TTB310 chromosome, complete genomeCRISPR-associated protein Cas23e-1787
NC_014484:447889:460643460643460930288Spirochaeta thermophila DSM 6192 chromosome, complete genomeCRISPR-associated protein Cas24e-1786.7
NC_014221:1786122:180478518047851805075291Truepera radiovictrix DSM 17093 chromosome, complete genomeCRISPR-associated protein Cas21e-1685.5
NC_007777:3962000:397080139708013971091291Frankia sp. CcI3, complete genomeprotein of unknown function DUF1963e-1580.5
NC_004757:905417:920552920552920842291Nitrosomonas europaea ATCC 19718, complete genomeDUF1961e-1374.7
NC_015387:261799:273564273564273863300Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeCRISPR-associated protein Cas23e-1167.4
NC_019673:2051363:209114020911402091430291Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein2e-1167.4
NC_011295:1263500:127696312769631277226264Coprothermobacter proteolyticus DSM 5265, complete genomeCRISPR-associated protein Cas22e-0857.8
NC_014215:421683:443868443868444170303Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,hypothetical protein2e-0754.7
NC_014150:1423758:142759014275901427874285Brachyspira murdochii DSM 12563 chromosome, complete genomeCRISPR-associated protein Cas24e-0753.5
NC_014209:2204515:220706922070692207332264Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,CRISPR-associated protein Cas25e-0753.1
NC_015387:2072237:208311420831142083377264Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeCRISPR-associated protein Cas25e-0753.1
NC_017161:1117741:112493911249391125205267Hydrogenobacter thermophilus TK-6 chromosome, complete genomeCRISPR-associated protein Cas22e-0651.6
NC_013799:1117750:112508111250811125347267Hydrogenobacter thermophilus TK-6, complete genomeCRISPR-associated protein2e-0651.6
NC_014915:332784:348479348479348742264Geobacillus sp. Y412MC52 chromosome, complete genomeCRISPR-associated protein Cas22e-0651.2