Query: NC_017217:669437 Bifidobacterium animalis subsp. lactis V9 chromosome, complete
Start: 669437, End: 691842, Length: 22406
Host Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria
General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium animalis and Bifidobacterium lactis were originally considered to be separate species. Recent studies evaluating the DNA relatedness and phenotypic similarities of these species has determined that they represent a single species.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_012815:669436* | 669436 | 691841 | 22406 | Bifidobacterium animalis subsp. lactis DSM 10140, complete genome | 0 | 44370 | BLASTN svg | BLASTP svg |
NC_012814:669434* | 669434 | 691839 | 22406 | Bifidobacterium animalis subsp. lactis Bl-04, complete genome | 0 | 44370 | BLASTN svg | BLASTP svg |
NC_015437:1685824 | 1685824 | 1712699 | 26876 | Selenomonas sputigena ATCC 35185 chromosome, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
NC_012803:691215* | 691215 | 726788 | 35574 | Micrococcus luteus NCTC 2665, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_013235:2129982* | 2129982 | 2172185 | 42204 | Nakamurella multipartita DSM 44233, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_015957:8677395* | 8677395 | 8707779 | 30385 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_003062:50756* | 50756 | 73559 | 22804 | Agrobacterium tumefaciens str. C58 chromosome circular, complete | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_013510:810525 | 810525 | 831599 | 21075 | Thermomonospora curvata DSM 43183, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_010407:32960* | 32960 | 51633 | 18674 | Clavibacter michiganensis subsp. sepedonicus chromosome, complete | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_003304:51048* | 51048 | 73760 | 22713 | Agrobacterium tumefaciens str. C58 chromosome circular, complete | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |