Pre_GI: BLASTN Hits

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Query: NC_017217:1362573 Bifidobacterium animalis subsp. lactis V9 chromosome, complete

Start: 1362573, End: 1383950, Length: 21378

Host Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium animalis and Bifidobacterium lactis were originally considered to be separate species. Recent studies evaluating the DNA relatedness and phenotypic similarities of these species has determined that they represent a single species.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012814:1357070*1357070138014923080Bifidobacterium animalis subsp. lactis Bl-04, complete genome020590BLASTN svgBLASTP svg
NC_012815:1357003*1357003138008223080Bifidobacterium animalis subsp. lactis DSM 10140, complete genome020590BLASTN svgBLASTP svg
NC_010545:1729161*1729161175559626436Corynebacterium urealyticum DSM 7109, complete genome1e-0560BLASTN svgBLASTP svg
NC_008825:32985063298506332293624431Methylibium petroleiphilum PM1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007643:95536295536297459919238Rhodospirillum rubrum ATCC 11170, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007643:2722265*2722265275282330559Rhodospirillum rubrum ATCC 11170, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_003911:1749467*1749467177014120675Silicibacter pomeroyi DSS-3, complete genome1e-0560BLASTN svgBLASTP svg
NC_014217:80040680040682559925194Starkeya novella DSM 506 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_003155:3913789*3913789393748923701Streptomyces avermitilis MA-4680, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_003888:55505825550582557168721106Streptomyces coelicolor A3(2), complete genome2e-0765.9BLASTN svgBLASTP svg