Pre_GI: BLASTP Hits

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Query: NC_017217:1092916:1114249 Bifidobacterium animalis subsp. lactis V9 chromosome, complete

Start: 1114249, End: 1114325, Length: 77

Host Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium animalis and Bifidobacterium lactis were originally considered to be separate species. Recent studies evaluating the DNA relatedness and phenotypic similarities of these species has determined that they represent a single species.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017216:1092751:11140841114084111416077Bifidobacterium animalis subsp. lactis BLC1, complete genometRNA-Pro1e-0652
NC_017215:1091941:11138621113862111393877Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,tRNA-Pro1e-0652
NC_017214:1727676:17489801748980174905677Bifidobacterium animalis subsp. lactis BB-12 chromosome, completetRNA-Pro1e-0652
NC_011835:1819707:18410391841039184111577Bifidobacterium animalis subsp. lactis AD011 chromosome, completetRNA-Pro1e-0652
NC_012815:1092795:11141281114128111420477Bifidobacterium animalis subsp. lactis DSM 10140, complete genometRNA-Pro1e-0652
NC_012814:1092860:11141931114193111426977Bifidobacterium animalis subsp. lactis Bl-04, complete genometRNA-Pro1e-0652