Some Help

Query: NC_017215:669358 Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,

Start: 669358, End: 693171, Length: 23814

Host Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium animalis and Bifidobacterium lactis were originally considered to be separate species. Recent studies evaluating the DNA relatedness and phenotypic similarities of these species has determined that they represent a single species.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012815:669436*66943669184122406Bifidobacterium animalis subsp. lactis DSM 10140, complete genome044370BLASTN svgBLASTP svg
NC_012814:669434*66943469183922406Bifidobacterium animalis subsp. lactis Bl-04, complete genome044370BLASTN svgBLASTP svg
NC_015437:16858241685824171269926876Selenomonas sputigena ATCC 35185 chromosome, complete genome1e-20109BLASTN svgBLASTP svg
NC_012803:691215*69121572678835574Micrococcus luteus NCTC 2665, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_013235:2129982*2129982217218542204Nakamurella multipartita DSM 44233, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015957:8677395*8677395870777930385Streptomyces violaceusniger Tu 4113 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_003062:50756*507567355922804Agrobacterium tumefaciens str. C58 chromosome circular, complete3e-0661.9BLASTN svgBLASTP svg
NC_013510:81052581052583159921075Thermomonospora curvata DSM 43183, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010407:32960*329605163318674Clavibacter michiganensis subsp. sepedonicus chromosome, complete3e-0661.9BLASTN svgBLASTP svg
NC_003304:51048*510487376022713Agrobacterium tumefaciens str. C58 chromosome circular, complete3e-0661.9BLASTN svgBLASTP svg