Pre_GI: BLASTN Hits

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Query: NC_017215:1499179 Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,

Start: 1499179, End: 1529841, Length: 30663

Host Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium animalis and Bifidobacterium lactis were originally considered to be separate species. Recent studies evaluating the DNA relatedness and phenotypic similarities of these species has determined that they represent a single species.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008618:1456000*1456000148109925100Bifidobacterium adolescentis ATCC 15703, complete genome2e-171611BLASTN svgBLASTP svg
NC_008618:15263921526392155516428773Bifidobacterium adolescentis ATCC 15703, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_012814:14943311494331152259928269Bifidobacterium animalis subsp. lactis Bl-04, complete genome035720BLASTN svgBLASTP svg
NC_012815:14942631494263152487730615Bifidobacterium animalis subsp. lactis DSM 10140, complete genome060630BLASTN svgBLASTP svg
NC_018720:357716*35771638686729152Bifidobacterium asteroides PRL2011 chromosome, complete genome0680BLASTN svgBLASTP svg
NC_015514:39116553911655393796226308Cellulomonas fimi ATCC 484 chromosome, complete genome1e-24123BLASTN svgBLASTP svg
NC_015389:11446911446913922524757Coriobacterium glomerans PW2 chromosome, complete genome3e-28135BLASTN svgBLASTP svg
NC_014364:35000413500041352601825978Spirochaeta smaragdinae DSM 11293 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg