Pre_GI: BLASTN Hits

Some Help

Query: NC_017214:379728 Bifidobacterium animalis subsp. lactis BB-12 chromosome, complete

Start: 379728, End: 412271, Length: 32544

Host Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium animalis and Bifidobacterium lactis were originally considered to be separate species. Recent studies evaluating the DNA relatedness and phenotypic similarities of these species has determined that they represent a single species.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013093:1036772*1036772108759950828Actinosynnema mirum DSM 43827, complete genome2e-20109BLASTN svgBLASTP svg
NC_009348:23621632362163238767225510Aeromonas salmonicida subsp. salmonicida A449, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_014318:13201701320170134146221293Amycolatopsis mediterranei U32 chromosome, complete genome7e-20107BLASTN svgBLASTP svg
NC_014219:2931796*2931796295390522110Bacillus selenitireducens MLS10 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_014976:1174430*1174430119919524766Bacillus subtilis BSn5 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_008618:1804610*1804610183073726128Bifidobacterium adolescentis ATCC 15703, complete genome0743BLASTN svgBLASTP svg
NC_012814:1682500*1682500171042227923Bifidobacterium animalis subsp. lactis Bl-04, complete genome054940BLASTN svgBLASTP svg
NC_012815:1682872*1682872171014027269Bifidobacterium animalis subsp. lactis DSM 10140, complete genome053800BLASTN svgBLASTP svg
NC_018720:15100841510084153502824945Bifidobacterium asteroides PRL2011 chromosome, complete genome5e-21111BLASTN svgBLASTP svg
NC_018720:18782011878201190278524585Bifidobacterium asteroides PRL2011 chromosome, complete genome7e-20107BLASTN svgBLASTP svg
NC_013714:22038542203854222231018457Bifidobacterium dentium Bd1, complete genome2e-60242BLASTN svgBLASTP svg
NC_010816:1319921*1319921136369443774Bifidobacterium longum DJO10A, complete genome9e-112412BLASTN svgBLASTP svg
NC_014328:1596016*1596016161409918084Clostridium ljungdahlii ATCC 49587 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_006958:82808982808984892220834Corynebacterium glutamicum ATCC 13032, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_020302:21905002190500220939218893Corynebacterium halotolerans YIM 70093 = DSM 44683, complete9e-41176BLASTN svgBLASTP svg
NC_010545:61934661934664304023695Corynebacterium urealyticum DSM 7109, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_015573:3070582*3070582309409923518Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_011883:2826000*2826000284787321874Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,2e-0869.9BLASTN svgBLASTP svg
NC_008751:1431905*1431905145566423760Desulfovibrio vulgaris subsp. vulgaris DP4, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_002937:2068117*2068117214464576529Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete4e-0661.9BLASTN svgBLASTP svg
NC_015738:27735522773552279595422403Eggerthella sp. YY7918, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_018665:650847*65084766859917753Exiguobacterium antarcticum B7 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_018665:2563375*2563375258672623352Exiguobacterium antarcticum B7 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_010556:691498*69149871146719970Exiguobacterium sibiricum 255-15, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_010556:2773396*2773396279691823523Exiguobacterium sibiricum 255-15, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_020054:4028444*4028444405509726654Fibrella aestuarina BUZ 2 drat genome4e-0971.9BLASTN svgBLASTP svg
NC_010336:996661*996661105214055480Francisella philomiragia subsp. philomiragia ATCC 25017, complete2e-0765.9BLASTN svgBLASTP svg
NC_015696:517941*51794157358855648Francisella sp. TX077308 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009749:1699152*1699152175595256801Francisella tularensis subsp. holarctica FTA, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008369:1702885*1702885175731754433Francisella tularensis subsp. holarctica OSU18, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007880:1703346*1703346176005556710Francisella tularensis subsp. holarctica, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010677:96470*9647014828851819Francisella tularensis subsp. mediasiatica FSC147, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008601:1733940*1733940179060556666Francisella tularensis subsp. novicida U112, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008245:24652*246526389439243Francisella tularensis subsp. tularensis FSC 198, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006570:24636*246367715752522Francisella tularensis subsp. tularensis Schu 4, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011852:21131421131423418322870Haemophilus parasuis SH0165, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009513:618000*61800064445826459Lactobacillus reuteri F275, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015697:1814128*1814128185559941472Lactobacillus reuteri SD2112 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014246:57021*570219633039310Mobiluncus curtisii ATCC 43063 chromosome, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_008705:15370801537080155764220563Mycobacterium sp. KMS, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_008146:15358271535827156295027124Mycobacterium sp. MCS, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_013235:17615391761539178059919061Nakamurella multipartita DSM 44233, complete genome1e-18103BLASTN svgBLASTP svg
NC_010718:193231*19323123794944719Natranaerobius thermophilus JW/NM-WN-LF, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_004193:950000*95000096959919600Oceanobacillus iheyensis HTE831, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_004193:375416*375416683449308034Oceanobacillus iheyensis HTE831, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_014363:48004948004950431124263Olsenella uli DSM 7084 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_012440:1841315*1841315186760426290Persephonella marina EX-H1, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_013720:3925756*3925756395075224997Pirellula staleyi DSM 6068, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_006085:1379370*1379370140289723528Propionibacterium acnes KPA171202, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_014215:1190447*1190447121409923653Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,2e-0869.9BLASTN svgBLASTP svg
NC_019673:1039258*1039258106559926342Saccharothrix espanaensis DSM 44229 complete genome2e-20109BLASTN svgBLASTP svg
NC_007613:2699500*2699500272161822119Shigella boydii Sb227, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007622:1842000*1842000189289150892Staphylococcus aureus RF122, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_012121:1444633*1444633146884124209Staphylococcus carnosus subsp. carnosus TM300, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_015957:10505870105058701052808222213Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-20109BLASTN svgBLASTP svg
NC_010730:952574*95257497119218619Sulfurihydrogenibium sp. YO3AOP1, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_006177:835459*83545985883523377Symbiobacterium thermophilum IAM 14863, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_006177:280234*28023431920738974Symbiobacterium thermophilum IAM 14863, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_008554:4839116*4839116486473925624Syntrophobacter fumaroxidans MPOB, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_014538:2158131*2158131218594827818Thermoanaerobacter sp. X513 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_011961:52883752883754823519399Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence6e-0867.9BLASTN svgBLASTP svg
NC_011959:972798*97279899909326296Thermomicrobium roseum DSM 5159, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_015581:771482*77148280463933158Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_007520:903799*90379992711823320Thiomicrospira crunogena XCL-2, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_014221:1518583*1518583153820419622Truepera radiovictrix DSM 17093 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_005139:2731623*2731623275419322571Vibrio vulnificus YJ016 chromosome I, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_007086:15522315522318149426272Xanthomonas campestris pv. campestris str. 8004, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003902:15562715562718258326957Xanthomonas campestris pv. campestris str. ATCC 33913, complete2e-0765.9BLASTN svgBLASTP svg
NC_010688:14916114916117820129041Xanthomonas campestris pv. campestris, complete genome2e-0765.9BLASTN svgBLASTP svg