Pre_GI: BLASTN Hits

Some Help

Query: NC_017200:4401945 Bacillus thuringiensis serovar finitimus YBT-020 chromosome,

Start: 4401945, End: 4423148, Length: 21204

Host Lineage: Bacillus thuringiensis; Bacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: This organism, also known as BT, is famous for the production of an insecticidal toxin. The bacterium was initially discovered as a pathogen of various insects and was first used as an insecticidal agent in the early part of this century. This organism, like many other Bacilli, is found in the soil, where it leads a saprophytic existence, but becomes an opportunistic pathogen of insects when ingested. The specific activity of the toxin towards insects and its lack of toxicity to animals has made this organism a useful biocontrol agent. The delta-endotoxin, which is produced during the sporulation part of the life cycle, causes midgut paralysis and disruption of feeding by the infected insect host. The delta-endotoxin, which is produced during the sporulation part of the life cycle, causes midgut paralysis and disruption of feeding by the infected insect host. The delta-endotoxin, which is produced during the sporulation part of the life cycle, causes midgut paralysis and disruption of feeding by the infected insect host. The presence of a parasporal crystal, which is outside the exosporium of the endospore, is indicative of production of the toxin, and serves as a marker for this species.Activation of the toxin typically requires a high pH environment such as the alkaline environments in insect midguts followed by proteolysis.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_006274:44482934448293446677918487Bacillus cereus E33L, complete genome014450BLASTN svgBLASTP svg
NC_012472:44004204400420441921018791Bacillus cereus 03BB102, complete genome014410BLASTN svgBLASTP svg
NC_007530:44001524400152441849918348Bacillus anthracis str. 'Ames Ancestor', complete genome014350BLASTN svgBLASTP svg
NC_005945:43997564399756441906119306Bacillus anthracis str. Sterne, complete genome014350BLASTN svgBLASTP svg
NC_003997:43990674399067441837219306Bacillus anthracis str. Ames, complete genome014350BLASTN svgBLASTP svg
NC_014335:43275844327584434709919516Bacillus cereus biovar anthracis str. CI chromosome, complete014300BLASTN svgBLASTP svg
NC_010184:44256764425676444871923044Bacillus weihenstephanensis KBAB4, complete genome011440BLASTN svgBLASTP svg
NC_004668:1010610*1010610103713326524Enterococcus faecalis V583, complete genome4e-76293BLASTN svgBLASTP svg
NC_010001:40406640406642359919534Clostridium phytofermentans ISDg, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_019978:393351*39335141209918749Halobacteroides halobius DSM 5150, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_021182:3525523*3525523356673741215Clostridium pasteurianum BC1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_015222:52391552391554609922185Nitrosomonas sp. AL212 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010520:3674883*3674883369898424102Clostridium botulinum A3 str. Loch Maree, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010001:649000*64900066890119902Clostridium phytofermentans ISDg, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015391:1323171*1323171134609922929Carnobacterium sp. 17-4 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_012491:5914500*5914500593863824139Brevibacillus brevis NBRC 100599, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014654:18883518883520899520161Halanaerobium sp. 'sapolanicus' chromosome, complete genome1e-0560BLASTN svgBLASTP svg