Pre_GI: BLASTP Hits

Some Help

Query: NC_017195:1852935:1854721 Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, complete

Start: 1854721, End: 1855062, Length: 342

Host Lineage: Bacillus subtilis; Bacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: This organism was one of the first bacteria studied, and was named Vibrio subtilis in 1835 and renamed Bacillus subtilis in 1872. It is one of the most well characterized bacterial organisms, and is a model system for cell differentiation and development. This soil bacterium can divide asymmetrically, producing an endospore that is resistant to environmental factors such as heat, acid, and salt, and which can persist in the environment for long periods of time. The endospore is formed at times of nutritional stress, allowing the organism to persist in the environment until conditions become favorable. Prior to the decision to produce the spore the bacterium might become motile, through the production of flagella, and also take up DNA from the environment through the competence system. The sporulation process is complex and involves the coordinated regulation of hundreds of genes in the genome. This initial step results in the coordinated asymmetric cellular division and endospore formation through multiple stages that produces a single spore from the mother cell.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012581:709234:731691731691732320630Bacillus anthracis str. CDC 684 chromosome, complete genomephage integrase, phage integrase family2e-32137
NC_014551:1872000:1877913187791318790581146Bacillus amyloliquefaciens DSM 7, complete genomephage integrase2e-27120
NC_006270:1415001:1421737142173714228761140Bacillus licheniformis ATCC 14580, complete genomeLambda integrase-like protein(phage related)3e-0960.5
NC_006322:1415863:1422600142260014237391140Bacillus licheniformis ATCC 14580, complete genomehypothetical protein3e-0960.5
NC_002936:797110:8092918092918105981308Dehalococcoides ethenogenes 195, complete genomesite-specific recombinase, phage integrase family5e-0959.7
NC_007644:1847000:1850618185061818517901173Moorella thermoacetica ATCC 39073, complete genomePhage integrase7e-0959.3
NC_014624:2996377:3006993300699330081321140Eubacterium limosum KIST612 chromosome, complete genomephage integrase family site specific recombinase4e-0856.6
NC_009089:3889811:3890925389092538921091185Clostridium difficile 630, complete genomeintegrase1e-0755.5
NC_017190:3166000:3179409317940931805661158Bacillus amyloliquefaciens LL3 chromosome, complete genometyrosine recombinase XerC1e-0755.1
NC_020410:1684192:169160116916011692218618Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete1e-0755.1
NC_014650:2969866:2987769298776929889231155Geobacillus sp. Y4.1MC1 chromosome, complete genomeintegrase1e-0755.1
NC_018867:1837941:1865170186517018665851416Dehalobacter sp. CF chromosome, complete genomePhage integrase3e-0753.9
NC_011134:311360:3164983164983176491152Streptococcus equi subsp. zooepidemicus str. MGCS10565, completetyrosine recombinase xerC-like3e-0753.9
NC_012471:141463:1425481425481436151068Streptococcus equi subsp. equi 4047, complete genomeintegrase5e-0753.1
NC_009253:3017280:3019218301921830203211104Desulfotomaculum reducens MI-1 chromosome, complete genomephage integrase family protein2e-0650.8
NC_015573:1573621:1574928157492815760401113Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeintegrase family protein2e-0650.8
NC_015875:190041:1900411900411912071167Streptococcus pseudopneumoniae IS7493 chromosome, complete genomeintegrase2e-0650.8
NC_013757:3100515:3113794311379431149271134Geodermatophilus obscurus DSM 43160, complete genomeintegrase family protein3e-0650.4
NC_011899:355638:3706253706253718001176Halothermothrix orenii H 168, complete genomephage integrase family protein5e-0649.7
NC_019897:3057000:3064727306472730658631137Thermobacillus composti KWC4 chromosome, complete genomesite-specific recombinase XerD8e-0649.3