Pre_GI: BLASTP Hits

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Query: NC_017179:1378875:1386858 Clostridium difficile BI1, complete genome

Start: 1386858, End: 1388012, Length: 1155

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile BI1 is a human strain isolated in the United States in 1988. This species is now recognized as the major causative agent of pseudomembranous colitis (inflammation of the colon) and diarrhea that may occur following antibiotic treatment. C. difficile infection represents one of the most common nosocomial (originating in a hospital) infections. This bacterium causes a wide spectrum of disease, ranging from mild, self-limiting diarrhea to serious diarrhea and, in some cases, complications such as pseudomembrane formation, toxic megacolon (dilation of the colon) and peritonitis, which often lead to lethality among patients. The bacteria produce high molecular mass polypeptide cytotoxins, A and B. Some strains produce only one of the toxins, others produce both. Toxin A causes inflammatory reaction involving hypersecretion of fluid and hemorrhagic necrosis through triggering cytokine release by neutrophils. Cytotoxin B depolymerizes actin, the major protein of the cytoskeleton, and thus aids in destruction of tissues. The combined action of the toxins results in necrosis of superficial epithelium and edema (fluidic swelling) in affected areas of intestine. Proliferation of C. difficile is normally prevented by normal intestinal microflora, which is believed to inhibit attachment of the bacterium and its toxins to intestinal walls. Alteration of intestinal microbial balance with antibiotic therapy and increased exposure to the bacterium in a hospital setting allows C. difficile to colonize susceptible individuals. Moreover, it has been shown that subinhibitory concentrations of antibiotics promote increased toxin production by C. difficile.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013315:1370000:1377084137708413782381155Clostridium difficile CD196 chromosome, complete genometranscription elongation protein0765
NC_015589:1899329:1915090191509019162561167Desulfotomaculum ruminis DSM 2154 chromosome, complete genometranscription termination factor NusA2e-127455
NC_013216:3376186:3390407339040733915521146Desulfotomaculum acetoxidans DSM 771, complete genomeNusA antitermination factor3e-127455
NC_009253:2139379:2150517215051721516711155Desulfotomaculum reducens MI-1 chromosome, complete genometranscription elongation factor NusA3e-126452
NC_014152:1430156:1440103144010314417101608Thermincola sp. JR, complete genometranscription termination factor NusA1e-124446
NC_020291:1464500:1468711146871114698771167Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometranscription elongation protein NusA3e-124445
NC_019970:1343670:1354082135408213551191038Thermoanaerobacterium thermosaccharolyticum M0795, complete genometranscription termination factor NusA4e-124444
NC_007907:2879568:2886337288633728878181482Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-122439
NC_014103:3985897:3998200399820039993121113Bacillus megaterium DSM319 chromosome, complete genometranscription termination factor NusA2e-122439
NC_011830:3904034:3913624391362439151051482Desulfitobacterium hafniense DCB-2, complete genomeNusA antitermination factor5e-122437
NC_016627:2799453:2820438282043828215711134Clostridium clariflavum DSM 19732 chromosome, complete genometranscription termination factor NusA5e-122437
NC_012563:2721658:2725722272572227270951374Clostridium botulinum A2 str. Kyoto, complete genomeN utilization substance protein A6e-119427
NC_010520:2585014:2613965261396526153381374Clostridium botulinum A3 str. Loch Maree, complete genomeN utilization substance protein A6e-119427
NC_009495:2524000:2551212255121225525851374Clostridium botulinum A str. ATCC 3502 chromosome, complete genometranscription elongation factor NusA6e-119427
NC_009697:2394826:2423235242323524246081374Clostridium botulinum A str. ATCC 19397 chromosome, completetranscription elongation factor NusA6e-119427
NC_009698:2367171:2395580239558023969531374Clostridium botulinum A str. Hall chromosome, complete genometranscription elongation factor NusA6e-119427
NC_010516:2511035:2539435253943525408081374Clostridium botulinum B1 str. Okra, complete genomeN utilization substance protein A5e-119427
NC_012658:2584355:2609397260939726107161320Clostridium botulinum Ba4 str. 657 chromosome, complete genometranscription elongation factor NusA2e-118426
NC_011772:3787500:3797898379789837990041107Bacillus cereus G9842, complete genomeN utilization substance protein A4e-118424
NC_017208:3816753:3827532382753238286381107Bacillus thuringiensis serovar chinensis CT-43 chromosome, completetranscription elongation factor NusA4e-118424
NC_014171:3701051:3711436371143637125421107Bacillus thuringiensis BMB171 chromosome, complete genometranscription elongation factor NusA9e-118423
NC_011725:3821789:3832176383217638332821107Bacillus cereus B4264 chromosome, complete genometranscription elongation factor NusA9e-118423
NC_007530:3616828:3627590362759036286961107Bacillus anthracis str. 'Ames Ancestor', complete genometranscription elongation factor NusA1e-117422
NC_005945:3615623:3628158362815836292641107Bacillus anthracis str. Sterne, complete genometranscription elongation factor NusA1e-117422
NC_005957:3638750:3649134364913436502401107Bacillus thuringiensis serovar konkukian str. 97-27, completetranscription elongation factor NusA1e-117422
NC_014335:3567931:3578315357831535794211107Bacillus cereus biovar anthracis str. CI chromosome, completetranscription elongation factor NusA1e-117422
NC_008600:3643905:3654289365428936553951107Bacillus thuringiensis str. Al Hakam, complete genomeN utilization substance protein A1e-117422
NC_012472:3661912:3672296367229636734021107Bacillus cereus 03BB102, complete genomeN utilization substance protein A1e-117422
NC_003909:3587695:3600194360019436013001107Bacillus cereus ATCC 10987, complete genometranscription elongation factor NusA1e-117422
NC_006274:3697255:3708016370801637091221107Bacillus cereus E33L, complete genometranscription elongation factor NusA1e-117422
NC_003997:3617000:3627463362746336285691107Bacillus anthracis str. Ames, complete genometranscription elongation factor NusA1e-117422
NC_011658:3603009:3615507361550736166131107Bacillus cereus AH187 chromosome, complete genometranscription elongation factor NusA1e-117422
NC_017200:3655496:3669193366919336702991107Bacillus thuringiensis serovar finitimus YBT-020 chromosome,transcription elongation factor NusA1e-117422
NC_016779:3579743:3590127359012735912331107Bacillus cereus F837/76 chromosome, complete genomeTranscription termination protein NusA1e-117422
NC_016771:3555506:3568004356800435691101107Bacillus cereus NC7401, complete genomenutilization substance protein A1e-117422
NC_012659:3617000:3627490362749036285961107Bacillus anthracis str. A0248, complete genometranscription elongation factor NusA1e-117422
NC_012581:559182:6099916099916110971107Bacillus anthracis str. CDC 684 chromosome, complete genometranscription elongation factor NusA1e-117422
NC_011969:3549000:3559469355946935605751107Bacillus cereus Q1 chromosome, complete genometranscription elongation factor nusa1e-117422
NC_011773:3651963:3662349366234936634551107Bacillus cereus AH820 chromosome, complete genometranscription elongation factor NusA1e-117422
NC_011898:513835:5213815213815225291149Clostridium cellulolyticum H10, complete genomeNusA antitermination factor3e-117421
NC_009674:2551759:2562200256220025633001101Bacillus cytotoxicus NVH 391-98 chromosome, complete genometranscription elongation factor NusA4e-117421
NC_010184:3675424:3686221368622136873271107Bacillus weihenstephanensis KBAB4, complete genomeNusA antitermination factor5e-117421
NC_004722:3777907:3788291378829137893971107Bacillus cereus ATCC 14579, complete genometranscription elongation factor NusA8e-117420
NC_014328:1405484:1410706141070614117701065Clostridium ljungdahlii ATCC 49587 chromosome, complete genometranscription elongation protein2e-116419
NC_008262:1835613:1853943185394318550431101Clostridium perfringens SM101, complete genomeN utilization substance protein A4e-115414
NC_020134:1173000:1177234117723411783671134Clostridium stercorarium subsp. stercorarium DSM 8532, completetranscription elongation protein NusA4e-114411
NC_012121:897866:9071679071679084801314Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative transcription elongation protein NusA1e-111403
NC_004461:921364:9473879473879486101224Staphylococcus epidermidis ATCC 12228, complete genometranscription elongation factor NusA1e-111403
NC_017353:1699652:1709560170956017107231164Staphylococcus lugdunensis N920143, complete genomeputative N utilization substance protein A1e-111403
NC_017341:1291583:1300938130093813021131176Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,transcription termination-antitermination factor8e-110397
NC_002952:1291444:1300799130079913019741176Staphylococcus aureus subsp. aureus MRSA252, complete genometranscription elongation factor NusA8e-110397
NC_007622:1214629:1223984122398412251591176Staphylococcus aureus RF122, complete genometranscription termination-antitermination factor8e-110397
NC_017338:1234077:1241132124113212423071176Staphylococcus aureus subsp. aureus JKD6159 chromosome, completetranscription termination-antitermination factor8e-110397
NC_009782:1327340:1336695133669513378701176Staphylococcus aureus subsp. aureus Mu3, complete genometranscription termination-antitermination factor6e-110397
NC_010001:3369500:3381314338131433823781065Clostridium phytofermentans ISDg, complete genomeNusA antitermination factor1e-109396
NC_007350:1551457:1556524155652415577171194Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,transcription termination-antitermination factor3e-109395
NC_017294:758992:7773197773197784791161Candidatus Arthromitus sp. SFB-mouse-Yit, complete genometranscription elongation factor NusA1e-104379
NC_014387:1175927:1184568118456811857221155Butyrivibrio proteoclasticus B316 chromosome 1, complete genometranscription termination factor NusA2e-103375
NC_014376:3214222:3225194322519432263961203Clostridium saccharolyticum WM1 chromosome, complete genometranscription termination factor NusA1e-97357
NC_014727:1292213:1314242131424213153931152Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,transcription elongation factor nusa1e-95350
NC_009483:2201986:2201986220198622031371152Geobacter uraniireducens Rf4 chromosome, complete genometranscription elongation factor NusA5e-95348
NC_009004:1770497:1774170177417017753181149Lactococcus lactis subsp. cremoris MG1363, complete genometranscription elongation factor nusA1e-91336
NC_019435:747162:7638647638647650121149Lactococcus lactis subsp. cremoris UC509.9, complete genomeTranscription antitermination factor2e-91335
NC_008527:740060:7567607567607579081149Lactococcus lactis subsp. cremoris SK11, complete genomeTranscription elongation factor3e-90332
NC_009009:1876367:1894840189484018961021263Streptococcus sanguinis SK36, complete genomeN utilization substance protein A, putative1e-83310
NC_019673:7738588:7742158774215877431801023Saccharothrix espanaensis DSM 44229 complete genomeTranscription elongation protein3e-83309
NC_015682:1457004:1476064147606414773231260Thermodesulfobacterium sp. OPB45 chromosome, complete genomeNusA antitermination factor4e-82305
NC_015500:2329957:2332779233277923342301452Treponema brennaborense DSM 12168 chromosome, complete genomeNusA antitermination factor5e-82305
NC_016631:773511:7906387906387922721635Granulicella mallensis MP5ACTX8 chromosome, complete genomeNusA antitermination factor5e-82305
NC_014774:239865:2511762511762527861611Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completetranscription elongation factor NusA8e-81301
NC_012985:465354:4716644716644732441581Candidatus Liberibacter asiaticus str. psy62, complete genometranscription elongation factor NusA2e-80299
NC_007297:1379742:1383230138323013843871158Streptococcus pyogenes MGAS5005, complete genometranscription elongation factor NusA4e-80298
NC_008023:1398085:1401573140157314027631191Streptococcus pyogenes MGAS2096, complete genomeN utilization substance protein A4e-80298
NC_008021:1374195:1377683137768313788731191Streptococcus pyogenes MGAS9429, complete genomeN utilization substance protein A4e-80298
NC_010003:570643:5765945765945776191026Petrotoga mobilis SJ95, complete genomeNusA antitermination factor3e-78292
NC_013939:1535071:1548028154802815493591332Deferribacter desulfuricans SSM1, complete genomeN utilization substance protein A2e-77290
NC_015672:1566565:1579517157951715808751359Flexistipes sinusarabici DSM 4947 chromosome, complete genomeNusA antitermination factor1e-76287
NC_015161:758929:7647827647827659991218Deinococcus proteolyticus MRP chromosome, complete genomeNusA antitermination factor1e-75283
NC_014657:944000:9545029545029555631062Caldicellulosiruptor owensensis OL chromosome, complete genometranscription termination factor nusa1e-75283
NC_014758:1349494:1359644135964413609301287Calditerrivibrio nitroreducens DSM 19672 chromosome, completenusa antitermination factor8e-75281
NC_014008:2176633:2179284217928421805341251Coraliomargarita akajimensis DSM 45221 chromosome, complete genometranscription termination factor NusA7e-75281
NC_004129:957890:9718589718589733391482Pseudomonas fluorescens Pf-5, complete genometranscription elongation factor NusA4e-75281
NC_020419:344000:3523243523243535801257Uncultured Termite group 1 bacterium phylotype Rs-D17 DNA, completetranscription antitermination factor NusA8e-75280
NS_000191:344000:3523243523243535801257Uncultured Termite group 1 bacterium phylotype Rs-D17, completetranscription antitermination factor NusA8e-75280
NC_015380:303215:3115613115613131051545Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genometranscription termination protein NusA1e-74280
NC_013721:276717:3028313028313039131083Gardnerella vaginalis 409-05, complete genometranscription termination factor NusA1e-73277
NC_011653:1728000:1728263172826317292971035Thermosipho africanus TCF52B, complete genometranscription termination factor NusA8e-74277
NC_013170:917177:9217959217959230031209Cryptobacterium curtum DSM 15641, complete genometranscription termination factor NusA2e-73276
NC_017066:683000:6911416911416926521512Rickettsia typhi str. TH1527 chromosome, complete genometranscription elongation factor NusA3e-73276
NC_017062:685321:6917096917096932201512Rickettsia typhi str. B9991CWPP chromosome, complete genometranscription elongation factor NusA3e-73276
NC_006142:683000:6911296911296926401512Rickettsia typhi str. Wilmington, complete genometranscription elongation factor NusA3e-73276
NC_009881:724269:7352127352127367231512Rickettsia akari str. Hartford, complete genometranscription elongation factor NusA3e-73275
NC_007940:669143:6749086749086764101503Rickettsia bellii RML369-C, complete genomeN utilization substance protein A, transcription termination factor NusA5e-73275
NC_017058:671000:6776796776796791901512Rickettsia australis str. Cutlack chromosome, complete genometranscription elongation factor NusA5e-73275
NC_009883:641491:6472566472566487581503Rickettsia bellii OSU 85-389, complete genometranscription elongation factor NusA9e-73274
NC_021150:4311902:4321847432184743233281482Azotobacter vinelandii CA6, complete genometranscription elongation factor NusA8e-73274
NC_012560:4311906:4321851432185143233321482Azotobacter vinelandii DJ, complete genomeTranscription termination factor NusA8e-73274
NC_013943:1381000:1387519138751913889011383Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomeNusA antitermination factor2e-72273
NC_012730:131445:1395861395861410971512Rickettsia peacockii str. Rustic, complete genometranscription elongation factor NusA2e-72273
NC_015866:767790:7756847756847771951512Rickettsia heilongjiangensis 054 chromosome, complete genometranscription elongation factor NusA8e-72271
NC_016050:771752:7797617797617812721512Rickettsia japonica YH, complete genometranscription elongation factor nusA8e-72271
NC_000963:676000:6846466846466861571512Rickettsia prowazekii str. Madrid E, complete genometranscription elongation factor NusA7e-72271
NC_017048:1018000:1026814102681410283251512Rickettsia prowazekii str. GvV257 chromosome, complete genometranscription elongation factor NusA7e-72271
NC_017049:675261:6827726827726842831512Rickettsia prowazekii str. Chernikova chromosome, complete genometranscription elongation factor NusA7e-72271
NC_017050:676000:6846416846416861521512Rickettsia prowazekii str. Katsinyian chromosome, complete genometranscription elongation factor NusA7e-72271
NC_017051:674000:6827846827846842951512Rickettsia prowazekii str. Dachau chromosome, complete genometranscription elongation factor NusA7e-72271
NC_017056:678450:6846186846186861291512Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genometranscription elongation factor NusA7e-72271
NC_017057:679113:6849046849046864151512Rickettsia prowazekii str. RpGvF24 chromosome, complete genometranscription elongation factor NusA7e-72271
NC_016914:772025:7801357801357816461512Rickettsia rickettsii str. Hino chromosome, complete genometranscription elongation factor NusA9e-72270
NC_016911:771916:7800267800267815371512Rickettsia rickettsii str. Hauke chromosome, complete genometranscription elongation factor NusA9e-72270
NC_016909:771542:7796517796517811621512Rickettsia rickettsii str. Arizona chromosome, complete genometranscription elongation factor NusA9e-72270
NC_010263:771901:7800117800117815221512Rickettsia rickettsii str. Iowa, complete genomeN utilization substance protein A9e-72270
NC_005823:3280000:3292762329276232941441383Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130transcription elongation factor NusA3e-71269
NC_004342:929033:9356929356929370741383Leptospira interrogans serovar Lai str. 56601 chromosome I,transcription elongation factor NusA3e-71269
NC_013517:2437574:2454536245453624556121077Sebaldella termitidis ATCC 33386, complete genomeNusA antitermination factor2e-70266
NC_013861:311908:3271653271653286431479Legionella longbeachae NSW150, complete genomeTranscription elongation protein nusA2e-69263
NC_020063:528296:5508745508745523611488Enterobacteriaceae bacterium strain FGI 57, complete genometranscription termination factor NusA6e-69261
NC_014909:86000:1158501158501173731524Candidatus Blochmannia vafer str. BVAF chromosome, complete genometranscription elongation protein nusA7e-69261
NC_012880:3915500:3920216392021639217061491Dickeya dadantii Ech703, complete genomeNusA antitermination factor1e-68260
NC_011528:535680:5477135477135492241512Coxiella burnetii CbuK_Q154, complete genomeN utilization substance protein A3e-68259
NC_011527:525759:5410765410765425871512Coxiella burnetii CbuG_Q212, complete genomeN utilization substance protein A3e-68259
NC_006368:3211998:3211998321199832134761479Legionella pneumophila str. Paris, complete genometranscription elongation factor NusA5e-68258
NC_002971:1379567:1384692138469213862031512Coxiella burnetii RSA 493, complete genometranscription elongation factor NusA1e-67257
NC_010117:1461502:1465273146527314667841512Coxiella burnetii RSA 331, complete genometranscription termination factor NusA1e-67257
NC_009879:475500:4819004819004834111512Rickettsia canadensis str. McKiel, complete genometranscription elongation factor NusA2e-67256
NC_012438:159927:1700111700111711231113Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genometranscription termination factor NusA2e-67256
NC_007645:1245927:1250132125013212516251494Hahella chejuensis KCTC 2396, complete genomeN utilization substance protein A2e-67256
NC_016929:474000:4809124809124824231512Rickettsia canadensis str. CA410 chromosome, complete genometranscription elongation factor NusA2e-67256
NC_006369:3058000:3070053307005330715311479Legionella pneumophila str. Lens, complete genometranscription elongation factor NusA1e-67256
NC_015318:706374:7148127148127158941083Hippea maritima DSM 10411 chromosome, complete genomeNusA antitermination factor6e-67254
NC_015968:4117835:4120550412055041220521503Enterobacter asburiae LF7a chromosome, complete genomeNusA antitermination factor1e-66254
NC_003112:1685330:1705889170588917073911503Neisseria meningitidis MC58, complete genometranscription elongation factor NusA2e-66253
NC_005139:2731623:2748976274897627504631488Vibrio vulnificus YJ016 chromosome I, complete sequencetranscription elongation factor NusA3e-66252
NC_014965:670115:6701156701156716021488Vibrio vulnificus MO6-24/O chromosome I, complete sequencetranscription termination protein NusA3e-66252
NC_016632:74569:8780687806893141509Serratia symbiotica str. 'Cinara cedri' chromosome, completetranscription pausing L factor6e-66251
NC_008817:1443983:1466055146605514674581404Prochlorococcus marinus str. MIT 9515, complete genomeN utilization substance protein A5e-65248
NC_005042:1480761:1504905150490515063231419Prochlorococcus marinus subsp. marinus str. CCMP1375, completetranscription elongation factor NusA3e-64246
NC_010730:578493:5881265881265892411116Sulfurihydrogenibium sp. YO3AOP1, complete genomeNusA antitermination factor2e-64246
NC_008816:1416711:1438788143878814401911404Prochlorococcus marinus str. AS9601, complete genomeN utilization substance protein A2e-64246
NC_009840:1485383:1508139150813915095421404Prochlorococcus marinus str. MIT 9215, complete genomeN utilization substance protein A2e-64246
NC_007577:1458657:1480736148073614821421407Prochlorococcus marinus str. MIT 9312, complete genomeNusA antitermination factor2e-64246
NC_014833:3362500:3383369338336933844871119Ruminococcus albus 7 chromosome, complete genomeNusA antitermination factor2e-64246
NC_008819:1531187:1555126155512615566191494Prochlorococcus marinus str. NATL1A, complete genomeN utilization substance protein A3e-64245
NC_005072:1405884:1428605142860514300081404Prochlorococcus marinus subsp. pastoris str. CCMP1986, completetranscription elongation factor NusA3e-64245
NC_007799:555900:5674875674875690401554Ehrlichia chaffeensis str. Arkansas, complete genomeN utilization substance protein A4e-64245
NC_014330:1784515:1802332180233218038191488Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative transcription elongation factor NusA1e-63244
NC_018604:492068:5114405114405129271488Brachyspira pilosicoli WesB complete genomeputative transcription elongation factor NusA1e-63244
NC_006831:772737:7800087800087815611554Ehrlichia ruminantium str. Gardel, complete genometranscription elongation factor NusA9e-64244
NC_005295:796437:8037118037118052641554Ehrlichia ruminantium str. Welgevonden, complete genometranscription elongation factor NusA9e-64244
NC_006832:776286:7835607835607851131554Ehrlichia ruminantium str. Welgevonden, complete genometranscription elongation factor NusA9e-64244
NC_007335:944175:9681149681149696071494Prochlorococcus marinus str. NATL2A, complete genometranscription elongation factor NusA9e-64244
NC_009091:1392469:1414567141456714159701404Prochlorococcus marinus str. MIT 9301, complete genomeN utilization substance protein A6e-64244
NC_007413:2312735:2322023232202323233001278Anabaena variabilis ATCC 29413, complete genometranscription elongation factor NusA2e-63243
NC_009465:29735:5431054310557851476Candidatus Vesicomyosocius okutanii HA, complete genometranscription termination factor NusA1e-63243
NC_020075:114790:1239161239161254331518Candidatus Blochmannia chromaiodes str. 640, complete genometranscription elongation protein nusA3e-63242
NC_015311:896123:8991058991059003701266Prevotella denticola F0289 chromosome, complete genometranscription termination factor NusA4e-63242
NC_003272:4621554:4628177462817746294541278Nostoc sp. PCC 7120, complete genometranscription elongation factor NusA6e-63241
NC_013132:782846:7889387889387901851248Chitinophaga pinensis DSM 2588, complete genomeNusA antitermination factor3e-62239
NC_014041:595464:5995725995726008041233Zunongwangia profunda SM-A87 chromosome, complete genometranscription elongation factor NusA4e-62238
NC_010628:7128951:7139828713982871411051278Nostoc punctiforme PCC 73102, complete genomeNusA antitermination factor1e-61237
NC_016599:2119631:2133941213394121351761236Owenweeksia hongkongensis DSM 17368 chromosome, complete genometranscription termination factor NusA2e-61236
NC_010546:1853825:1863547186354718648331287Cyanothece sp. ATCC 51142 chromosome circular, complete sequencetranscription termination factor, N utilization substance protein1e-61236
NC_011852:211314:2175372175372190691533Haemophilus parasuis SH0165, complete genometranscription elongation factor NusA3e-61235
NC_019771:3237000:3241875324187532431521278Anabaena cylindrica PCC 7122, complete genomeNusA antitermination factor3e-61235
NC_012440:197728:2074102074102085341125Persephonella marina EX-H1, complete genometranscription termination factor NusA5e-61235
NC_016893:563890:5742065742065756901485Wigglesworthia glossinidia endosymbiont of Glossina morsitanstranscription termination/antitermination L factor8e-61234
NC_008571:185000:1884971884971897291233Gramella forsetii KT0803, complete genometranscription elongation protein8e-61234
NC_014248:619500:6250686250686263451278Nostoc azollae 0708 chromosome, complete genomeNusA antitermination factor7e-61234
NC_013771:803042:8206718206718218341164Cyanobacterium UCYN-A, complete genometranscription termination factor NusA6e-61234
NC_011728:832073:8390158390158404631449Borrelia burgdorferi ZS7, complete genometranscription elongation factor NusA6e-61234
NC_004344:257471:2676842676842691681485Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,transcription elongation factor NusA2e-60233
NC_004663:4373902:4381917438191743832361320Bacteroides thetaiotaomicron VPI-5482, complete genometranscription elongation factor NusA3e-60232
NC_019757:5748432:5766970576697057682471278Cylindrospermum stagnale PCC 7417, complete genomeNusA antitermination factor3e-60232
NC_017259:388000:4008574008574023441488Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,transcription elongation factor NusA7e-60231
NC_014759:2883500:2886639288663928878801242Marivirga tractuosa DSM 4126 chromosome, complete genomenusa antitermination factor1e-59230
NC_015167:2068607:2074286207428620755181233Cellulophaga lytica DSM 7489 chromosome, complete genomeNusA antitermination factor1e-59230
NC_016609:7565483:7577788757778875790351248Niastella koreensis GR20-10 chromosome, complete genomeNusA antitermination factor3e-59229
NC_016603:3475843:3480183348018334816671485Acinetobacter calcoaceticus PHEA-2 chromosome, complete genomenusA; transcription elongation factor NusA3e-59229
NC_005061:96536:1113771113771128821506Candidatus Blochmannia floridanus, complete genometranscription elongation factor NusA5e-59228
NC_015638:1541346:1544466154446615456981233Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeNusA antitermination factor7e-59228
NC_014472:941453:9592819592819605131233Flavobacteriales bacterium HTCC2170 chromosome, complete genometranscription elongation factor NusA1e-58226
NC_014934:2339196:2343470234347023447021233Cellulophaga algicola DSM 14237 chromosome, complete genomenusa antitermination factor5e-58225
NC_009615:4304158:4323018432301843242831266Parabacteroides distasonis ATCC 8503 chromosome, complete genometranscription elongation factor NusA4e-58225
NC_018721:865530:8808468808468820811236Psychroflexus torquis ATCC 700755 chromosome, complete genometranscription termination protein NusA4e-58225
NC_002528:404545:4182434182434197331491Buchnera aphidicola str. APS (Acyrthosiphon pisum), completetranscription elongation factor NusA4e-58225
NC_011244:863306:8670328670328685161485Borrelia recurrentis A1, complete genometranscription elongation factor NusA9e-58224
NC_013161:3448966:3457613345761334588511239Cyanothece sp. PCC 8802, complete genomeNusA antitermination factor1e-57224
NC_011726:2793669:2802607280260728038451239Cyanothece sp. PCC 8801, complete genomeNusA antitermination factor1e-57224
NC_016001:364666:3720673720673733201254Flavobacterium branchiophilum, complete genometranscription elongation protein NusA2e-57223
NC_010296:1271393:1278479127847912796751197Microcystis aeruginosa NIES-843, complete genometranscription elongation factor NusA2e-54213
NC_020125:288706:3018753018753031101236Riemerella anatipestifer RA-CH-2, complete genomehypothetical protein2e-54213
NC_017045:1579596:1586443158644315876781236Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,nusa antitermination factor2e-54213
NC_014501:5832879:5844077584407758452671191Cyanothece sp. PCC 7822 chromosome, complete genomeNusA antitermination factor2e-54213
NC_008601:1733940:1775671177567117771401470Francisella tularensis subsp. novicida U112, complete genometranscription elongation factor2e-53209
NC_015501:1341661:1344951134495113463601410Porphyromonas asaccharolytica DSM 20707 chromosome, completeNusA antitermination factor4e-53209
NC_004545:392685:3994053994054008981494Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genometranscription elongation factor NusA5e-53208
NC_010677:96470:1210411210411225101470Francisella tularensis subsp. mediasiatica FSC147, complete genometranscription termination factor NusA1e-52207
NC_010336:996661:1021282102128210227511470Francisella philomiragia subsp. philomiragia ATCC 25017, completetranscription elongation factor1e-52207
NC_008369:1702885:1743802174380217452711470Francisella tularensis subsp. holarctica OSU18, complete genomeN utilization substance protein A3e-52206
NC_009749:1699152:1740069174006917415381470Francisella tularensis subsp. holarctica FTA, complete genometranscription termination factor NusA3e-52206
NC_007880:1703346:1744172174417217456411470Francisella tularensis subsp. holarctica, complete genomeN utilization substance protein A3e-52206
NC_006570:24636:4919249192506611470Francisella tularensis subsp. tularensis Schu 4, complete genometranscription elongation factor NusA2e-52206
NC_008245:24652:4920849208506771470Francisella tularensis subsp. tularensis FSC 198, complete genomeN utilization substance protein A2e-52206
NC_009257:109528:1341021341021355711470Francisella tularensis subsp. tularensis WY96-3418 chromosome,transcription elongation factor NusA2e-52206
NC_016933:24654:4921049210506791470Francisella tularensis TIGB03 chromosome, complete genomeTranscription termination protein NusA2e-52206
NC_016937:24654:4921049210506791470Francisella tularensis subsp. tularensis TI0902 chromosome,transcription termination protein NusA2e-52206
NC_015696:517941:5427435427435442121470Francisella sp. TX077308 chromosome, complete genometranscription termination protein NusA1e-51204
NC_017161:1:216722167222655984Hydrogenobacter thermophilus TK-6 chromosome, complete genometranscription termination factor NusA1e-48194
NC_013799:1:216112161122594984Hydrogenobacter thermophilus TK-6, complete genometranscription elongation factor1e-48194
NC_011295:847903:8515408515408525711032Coprothermobacter proteolyticus DSM 5265, complete genometranscription termination factor NusA7e-43174
NC_000908:160072:1791511791511807461596Mycoplasma genitalium G37, complete genometranscription elongation factor NusA1e-35150
NC_017367:1505780:1509847150984715110341188Helicobacter pylori F57, complete genometranscription elongation factor NusA6e-31135
NC_017378:1489818:1494359149435914955461188Helicobacter pylori Puno120 chromosome, complete genometranscription elongation factor NusA4e-30132
NC_017365:1466500:1467763146776314689501188Helicobacter pylori F30, complete genometranscription elongation factor NusA4e-30132
NC_017354:1465925:1467174146717414683611188Helicobacter pylori 52 chromosome, complete genometranscription elongation factor NusA5e-30132
NC_018939:1583653:1588592158859215897791188Helicobacter pylori 26695 chromosome, complete genometranscription elongation factor NusA9e-30131
NC_000915:1583967:1588569158856915897561188Helicobacter pylori 26695, complete genometranscription elongation factor NusA9e-30131
NC_017371:1601452:1605574160557416067611188Helicobacter pylori Gambia94/24 chromosome, complete genometranscription elongation factor NusA2e-29130
NC_011498:1571840:1573109157310915742961188Helicobacter pylori P12, complete genometranscription termination factor A2e-29130
NC_014555:1477934:1479176147917614803631188Helicobacter pylori PeCan4 chromosome, complete genometranscription elongation factor NusA1e-29130
NC_013510:5499447:552448055244805525253774Thermomonospora curvata DSM 43183, complete genome6e-1995.5
NC_011355:1:877787779331555Mycobacterium liflandii 128FXT plasmid pMUM002, complete sequencenucleic acid binding protein7e-1582
NC_014253:729996:738995738995739420426Methanohalobium evestigatum Z-7303 chromosome, complete genomeNusA family KH domain-containing protein4e-0652.8
NC_019974:192862:198818198818199249432Natronococcus occultus SP4, complete genomeNusA family KH domain protein8e-0651.6